| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ampC [C]
Identifier: 170079203
GI number: 170079203
Start: 2737557
End: 2738708
Strand: Reverse
Name: ampC [C]
Synonym: SYNPCC7002_A2609
Alternate gene names: 170079203
Gene position: 2738708-2737557 (Counterclockwise)
Preceding gene: 170079204
Following gene: 170079200
Centisome position: 91.05
GC content: 42.36
Gene sequence:
>1152_bases ATGACCTTTCCAATCATTGCTAAAGCGCTACCAGATCAAAAAATTAATCAATATTTAGCAGAACACTACACCCAATACCA AACACGAGAAAATTTTTCTGGGATTCAATTATCCGTTAAAGTTAACGAAGCCCCAACCCAAACCTACGTCATCGGTCGGG AAAGTCATGACCCCAACAGTGCGCCCATTACAGCCGAAAGCCTCTTTCACATCGGCAGCATTACGAAATCTTTTACGGCG GCTTTACTGCTTCAAAATGACCGTAACCAAGCCCTTGATCTAAATGCTGACTTTACCCAATATTTACCCGAATATTCCCA CTGGTCTGGCATTATAACCACGCAGCTTTTGAATATGACATCTGGCTTGCCAAATTATACAGATAGTCCCACTGTTAATT ATTTGTTGTCGCAAGACCTAGAGCAATTTTGGGAAAAACGCAGTTTGATTGACTTTGTTTATCCGCAACATTCTTCTGCT AAACCGCCCCTCAGAAGCGGGTATGACTACAACAACACAGGATATTTATTAAGTGCCCTACTTTTGGAAACAGTTACCGA AAAATCCTTTGCCAATCTGATTACAGAGCAGCTTTTGCAACCCTACGAATTGGAAAACACATTTTATCCTGTGCCTAATC CTAGTGCCGCTGTTCAGCAACGTCTCGTCGAAGGTTACAATTTCAATCCTTATACCAACCCAGAACTTGTGGGAAAAGAT GTTAGCCGTAACAATCTGTCTTGGGCAGGGGCGGCGGGGGCCTTAGTTTCAAATACAGAAGACATTATCCACTGGGTACG AACATTATTCATTGAAGACAATTTGCTGTCCGCTGAAGAAAAAGAAGAAATGCAGCAAATCGTTTCTTTACAGACAGGAG AGGCGATCGCCCAAACAACAGCGACAGATCCCTATGGTTTTGGTTTGGGGATTATCCAGGGTTACGACGAACGTTGGGGC AATTATTGGTTTTATCAAGGCGAAACACTGGGCTATCGTTCATTTTATGTGTATTTCCCTTGTAATCAAGTGATTATTTC TGCTCTATTTAATAGCTCTGTAGATGCTCAGAATAACCACGCCCGCAGTTTAATCCAGCAGGTCTACGGTACTCTTTTAG AAGATGATCCTGCGTTGATATGTCAGACTTGA
Upstream 100 bases:
>100_bases CTCTGAATATTCATTCCATAATGAATGCGGTGTCAAATAGAATTAAATATTTATCATGCTTAAAATGCTGGCTTTAGCCT TCTTGGGAATTACTACTTCC
Downstream 100 bases:
>100_bases GTGTTGGAAAACGAATTTGCCCATCCTAGACAAGCAAGTTTAGCCTGAGTGTAGACCCAAGCCGATTTTATTTGTTCGAT GCCGTCTTCATAAGCAAGGA
Product: beta-lactamase
Products: NA
Alternate protein names: DD-carboxypeptidase; DD-peptidase [H]
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MTFPIIAKALPDQKINQYLAEHYTQYQTRENFSGIQLSVKVNEAPTQTYVIGRESHDPNSAPITAESLFHIGSITKSFTA ALLLQNDRNQALDLNADFTQYLPEYSHWSGIITTQLLNMTSGLPNYTDSPTVNYLLSQDLEQFWEKRSLIDFVYPQHSSA KPPLRSGYDYNNTGYLLSALLLETVTEKSFANLITEQLLQPYELENTFYPVPNPSAAVQQRLVEGYNFNPYTNPELVGKD VSRNNLSWAGAAGALVSNTEDIIHWVRTLFIEDNLLSAEEKEEMQQIVSLQTGEAIAQTTATDPYGFGLGIIQGYDERWG NYWFYQGETLGYRSFYVYFPCNQVIISALFNSSVDAQNNHARSLIQQVYGTLLEDDPALICQT
Sequences:
>Translated_383_residues MTFPIIAKALPDQKINQYLAEHYTQYQTRENFSGIQLSVKVNEAPTQTYVIGRESHDPNSAPITAESLFHIGSITKSFTA ALLLQNDRNQALDLNADFTQYLPEYSHWSGIITTQLLNMTSGLPNYTDSPTVNYLLSQDLEQFWEKRSLIDFVYPQHSSA KPPLRSGYDYNNTGYLLSALLLETVTEKSFANLITEQLLQPYELENTFYPVPNPSAAVQQRLVEGYNFNPYTNPELVGKD VSRNNLSWAGAAGALVSNTEDIIHWVRTLFIEDNLLSAEEKEEMQQIVSLQTGEAIAQTTATDPYGFGLGIIQGYDERWG NYWFYQGETLGYRSFYVYFPCNQVIISALFNSSVDAQNNHARSLIQQVYGTLLEDDPALICQT >Mature_382_residues TFPIIAKALPDQKINQYLAEHYTQYQTRENFSGIQLSVKVNEAPTQTYVIGRESHDPNSAPITAESLFHIGSITKSFTAA LLLQNDRNQALDLNADFTQYLPEYSHWSGIITTQLLNMTSGLPNYTDSPTVNYLLSQDLEQFWEKRSLIDFVYPQHSSAK PPLRSGYDYNNTGYLLSALLLETVTEKSFANLITEQLLQPYELENTFYPVPNPSAAVQQRLVEGYNFNPYTNPELVGKDV SRNNLSWAGAAGALVSNTEDIIHWVRTLFIEDNLLSAEEKEEMQQIVSLQTGEAIAQTTATDPYGFGLGIIQGYDERWGN YWFYQGETLGYRSFYVYFPCNQVIISALFNSSVDAQNNHARSLIQQVYGTLLEDDPALICQT
Specific function: Catalyzes distinct carboxypeptidation and transpeptidation reactions during the last stages of wall peptidoglycan synthesis. Mistaking a beta-lactam antibiotic molecule for a normal substrate (i.e., a D-alanyl-D-alanine- terminated peptide), it becomes im
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S12 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.4.16.4 [H]
Molecular weight: Translated: 43291; Mature: 43159
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFPIIAKALPDQKINQYLAEHYTQYQTRENFSGIQLSVKVNEAPTQTYVIGRESHDPNS CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCC APITAESLFHIGSITKSFTAALLLQNDRNQALDLNADFTQYLPEYSHWSGIITTQLLNMT CCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCHHHHCCCHHHCCHHHHHHHHHHH SGLPNYTDSPTVNYLLSQDLEQFWEKRSLIDFVYPQHSSAKPPLRSGYDYNNTGYLLSAL CCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH LLETVTEKSFANLITEQLLQPYELENTFYPVPNPSAAVQQRLVEGYNFNPYTNPELVGKD HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCC VSRNNLSWAGAAGALVSNTEDIIHWVRTLFIEDNLLSAEEKEEMQQIVSLQTGEAIAQTT CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHC ATDPYGFGLGIIQGYDERWGNYWFYQGETLGYRSFYVYFPCNQVIISALFNSSVDAQNNH CCCCCCCCHHHHCCCHHHCCCEEEECCCEECEEEEEEEECHHHHHHHHHHCCCCCCCCHH ARSLIQQVYGTLLEDDPALICQT HHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure TFPIIAKALPDQKINQYLAEHYTQYQTRENFSGIQLSVKVNEAPTQTYVIGRESHDPNS CCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCC APITAESLFHIGSITKSFTAALLLQNDRNQALDLNADFTQYLPEYSHWSGIITTQLLNMT CCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCHHHHCCCHHHCCHHHHHHHHHHH SGLPNYTDSPTVNYLLSQDLEQFWEKRSLIDFVYPQHSSAKPPLRSGYDYNNTGYLLSAL CCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH LLETVTEKSFANLITEQLLQPYELENTFYPVPNPSAAVQQRLVEGYNFNPYTNPELVGKD HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCC VSRNNLSWAGAAGALVSNTEDIIHWVRTLFIEDNLLSAEEKEEMQQIVSLQTGEAIAQTT CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHC ATDPYGFGLGIIQGYDERWGNYWFYQGETLGYRSFYVYFPCNQVIISALFNSSVDAQNNH CCCCCCCCHHHHCCCHHHCCCEEEECCCEECEEEEEEEECHHHHHHHHHHCCCCCCCCHH ARSLIQQVYGTLLEDDPALICQT HHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3830154; 7925404; 3030739; 2175384; 2386365; 3997832; 7490745 [H]