| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079202
Identifier: 170079202
GI number: 170079202
Start: 2736562
End: 2737353
Strand: Direct
Name: 170079202
Synonym: SYNPCC7002_A2608
Alternate gene names: NA
Gene position: 2736562-2737353 (Clockwise)
Preceding gene: 170079201
Following gene: 170079206
Centisome position: 90.97
GC content: 51.77
Gene sequence:
>792_bases TTGCCCAAGACCCAACTGAAATTTATTTCGCGCACTACTTTTCCCTATCTTTTCCCTCTAAAAATCCCCATGAAATCCAC CTTACGGCCCCTGCTCTCTTGTTTACCCGTCCTCCTCGGCTTTTGGGTTGAGGGGGCGATCGCCAATCCCCGCCCCACGG TTCCCACCACAACCCCTAGCGCCTACCCTGTGCTAGTGAGTCAAGTTCCAGTGGGACGACAGGTTGCCACCCAAAAAACA ACCTACGCCCCCAGCGAACCGATTATGGTGAACTACGCCAATCTACCGGGCAATTCTGGAGATTGGATTACCATCGTTCC GGCCAATGCCCCAGACAATAGCTACGAAGAATGGTTTTATACCGATGGTCAGCGCTCTGGCTCCCGTCAATTCAAAGGTC TTGCTGCTGGCAGCTACGAAGTGCGGGTTTACCACAACTGGCCCAATGGCGGTTATGTCGTCCAGGATCGCTACCGTTTC ACTGTCGGGACGCAAACGGTAACACCAATTAACAACCGTCATATCTCGACAAATAAGACTGTCTACCAAGCCAATGAACC GATTATGGTGAACTATGCTAATCTCCCTGGTAATCGCCAGGATTGGATCACCATTGTTGCGGCCAATGCCCCTGATGATA GCTACGGTGAATGGTTTTATACCCAAGGACAACGCTCTGGCTCCCGCCAATTCAGAGGTCTCGCCCCCGGCAACTATGAA GTACGGGTCTATTACAACTGGTCTGCGGGTGGTTATGTCGTCCAAGATCGTTATGCCTTTACAGTGCGCTAA
Upstream 100 bases:
>100_bases CCTCCCCAAGAGCTGCCTATAATTCAGCTAGAGTCGGCTATTCCGAGAAAATCTGCATTAGTTCTTGGCCTCAGCAACTA TCTCTATCTAACGGACTTGT
Downstream 100 bases:
>100_bases CCAGCTATCAATCTAGGCCAAATTTAATTGATTCTTGTCTTCCAATGCTTAAGCTCCCCGATAGAAATATTCACCAAGCT TAAGCAGCGGAAGATTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPKTQLKFISRTTFPYLFPLKIPMKSTLRPLLSCLPVLLGFWVEGAIANPRPTVPTTTPSAYPVLVSQVPVGRQVATQKT TYAPSEPIMVNYANLPGNSGDWITIVPANAPDNSYEEWFYTDGQRSGSRQFKGLAAGSYEVRVYHNWPNGGYVVQDRYRF TVGTQTVTPINNRHISTNKTVYQANEPIMVNYANLPGNRQDWITIVAANAPDDSYGEWFYTQGQRSGSRQFRGLAPGNYE VRVYYNWSAGGYVVQDRYAFTVR
Sequences:
>Translated_263_residues MPKTQLKFISRTTFPYLFPLKIPMKSTLRPLLSCLPVLLGFWVEGAIANPRPTVPTTTPSAYPVLVSQVPVGRQVATQKT TYAPSEPIMVNYANLPGNSGDWITIVPANAPDNSYEEWFYTDGQRSGSRQFKGLAAGSYEVRVYHNWPNGGYVVQDRYRF TVGTQTVTPINNRHISTNKTVYQANEPIMVNYANLPGNRQDWITIVAANAPDDSYGEWFYTQGQRSGSRQFRGLAPGNYE VRVYYNWSAGGYVVQDRYAFTVR >Mature_262_residues PKTQLKFISRTTFPYLFPLKIPMKSTLRPLLSCLPVLLGFWVEGAIANPRPTVPTTTPSAYPVLVSQVPVGRQVATQKTT YAPSEPIMVNYANLPGNSGDWITIVPANAPDNSYEEWFYTDGQRSGSRQFKGLAAGSYEVRVYHNWPNGGYVVQDRYRFT VGTQTVTPINNRHISTNKTVYQANEPIMVNYANLPGNRQDWITIVAANAPDDSYGEWFYTQGQRSGSRQFRGLAPGNYEV RVYYNWSAGGYVVQDRYAFTVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29630; Mature: 29498
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00019 ACTININ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTQLKFISRTTFPYLFPLKIPMKSTLRPLLSCLPVLLGFWVEGAIANPRPTVPTTTPS CCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AYPVLVSQVPVGRQVATQKTTYAPSEPIMVNYANLPGNSGDWITIVPANAPDNSYEEWFY CCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEE TDGQRSGSRQFKGLAAGSYEVRVYHNWPNGGYVVQDRYRFTVGTQTVTPINNRHISTNKT ECCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEEEEEECCEEECCCCCCEECCCCE VYQANEPIMVNYANLPGNRQDWITIVAANAPDDSYGEWFYTQGQRSGSRQFRGLAPGNYE EEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCEECCCCCCCEE VRVYYNWSAGGYVVQDRYAFTVR EEEEEEECCCCEEEECEEEEEEC >Mature Secondary Structure PKTQLKFISRTTFPYLFPLKIPMKSTLRPLLSCLPVLLGFWVEGAIANPRPTVPTTTPS CCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AYPVLVSQVPVGRQVATQKTTYAPSEPIMVNYANLPGNSGDWITIVPANAPDNSYEEWFY CCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEE TDGQRSGSRQFKGLAAGSYEVRVYHNWPNGGYVVQDRYRFTVGTQTVTPINNRHISTNKT ECCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEEEEEECCEEECCCCCCEECCCCE VYQANEPIMVNYANLPGNRQDWITIVAANAPDDSYGEWFYTQGQRSGSRQFRGLAPGNYE EEECCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCEECCCCCCCEE VRVYYNWSAGGYVVQDRYAFTVR EEEEEEECCCCEEEECEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA