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The map label for this gene is ccmK [H]

Identifier: 170079206

GI number: 170079206

Start: 2742064

End: 2742372

Strand: Direct

Name: ccmK [H]

Synonym: SYNPCC7002_A2612

Alternate gene names: 170079206

Gene position: 2742064-2742372 (Clockwise)

Preceding gene: 170079202

Following gene: 170079207

Centisome position: 91.16

GC content: 54.69

Gene sequence:

>309_bases
ATGCAAGAAGCCGTGGGAGTTATTGAAACCCTAGGTTTTCCCGCCGTCCTTGCCGCCGCTGATGCCATGGTCAAAGCGGG
CCGTGTCACCATTGTGTTTTTTGACAAAGCCGAACGAGGTAATTTTATCGTTGTCATTCGGGGTCGTACCTCAGAAGTGC
GCCCTGCCATGGAAGCCGGTCTACGGGCCGCCGAGGAAACTGTCGGTGGTCAAGTGATGAGCCATTACACCGTGCCCAAT
CCCCCCGATAATGTCGTCGGGATTTTACCCCTGGAATATACCCAGGCCTCCCTCAAATTTCGCTCCTAG

Upstream 100 bases:

>100_bases
GCAAAGAACCAGTCAAGACCATTCCAAAAAATTTCCTATAGCAGAAGGGAACCAATGTGGGAGAATATAGCCCTATCCCT
TGCCCCCAGGAGTCGAGATT

Downstream 100 bases:

>100_bases
TGCAGCGAAGATCTTGGTGTTTTGCCCAGTTTAGAGAATAATATGTGCTTGGGTGAAGAACCAAATATGAATAAGTTTTA
CTAATCACAAAGATAAAGGA

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MQEAVGVIETLGFPAVLAAADAMVKAGRVTIVFFDKAERGNFIVVIRGRTSEVRPAMEAGLRAAEETVGGQVMSHYTVPN
PPDNVVGILPLEYTQASLKFRS

Sequences:

>Translated_102_residues
MQEAVGVIETLGFPAVLAAADAMVKAGRVTIVFFDKAERGNFIVVIRGRTSEVRPAMEAGLRAAEETVGGQVMSHYTVPN
PPDNVVGILPLEYTQASLKFRS
>Mature_102_residues
MQEAVGVIETLGFPAVLAAADAMVKAGRVTIVFFDKAERGNFIVVIRGRTSEVRPAMEAGLRAAEETVGGQVMSHYTVPN
PPDNVVGILPLEYTQASLKFRS

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 10933; Mature: 10933

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEAVGVIETLGFPAVLAAADAMVKAGRVTIVFFDKAERGNFIVVIRGRTSEVRPAMEAG
CCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHH
LRAAEETVGGQVMSHYTVPNPPDNVVGILPLEYTQASLKFRS
HHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCEEEEECC
>Mature Secondary Structure
MQEAVGVIETLGFPAVLAAADAMVKAGRVTIVFFDKAERGNFIVVIRGRTSEVRPAMEAG
CCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHH
LRAAEETVGGQVMSHYTVPNPPDNVVGILPLEYTQASLKFRS
HHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]