| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079166
Identifier: 170079166
GI number: 170079166
Start: 2687305
End: 2688540
Strand: Direct
Name: 170079166
Synonym: SYNPCC7002_A2572
Alternate gene names: NA
Gene position: 2687305-2688540 (Clockwise)
Preceding gene: 170079165
Following gene: 170079168
Centisome position: 89.34
GC content: 52.18
Gene sequence:
>1236_bases ATGGCACCTCTTTTTGTTGATTCCCTCAAACAGCAGTTCCACATCTGGTTTACCCAGCAGCAGGCAACCACGGAAGAAGC TGCCGACTTGGTAGAACTCCCCGATACCCTGTCCCTCCAGTTGGCGCGTCAACTGGAAACCCTGGCGAGTCCAGAGGTCT ATTGTGCGCCTGTCAAAGCCTCCATTACCGAGGCCATTGAAACTTGGCAGACGAATTTGGAAGCCCCCAATAGTTTTGTG CTTCTGGGCAATCCCGTGGAGCCGCTCCCCAAAATTTTGAGTGAGAGTATCCCCCGCCAAACTTTTCCTGATCTGGAAAT CCTCACTCCCCTGGATTGTCTACAGCGCCCCCTCCACCCCAGACACATTAGCCAACAGATCCAAAAAGCCCTAGAACTTT ATCCCCAGATTGATCTCAGCCCAGGCGATCGCCAAGATCAGCCAACCGTGAATCAACTAGAACAACGACAAACCCTGGTG ATTATTCCCTGTCTGGAGCAATGTTTTCTCCGGTGTATTGGCGGTTGGGAAGGCATTGAGACCCTCCGGGATATCACCAT TCAAAATCGCCACTGTTTCTGGATCATGAGTTGTAACCATTGGGCCTGGGACTTTCTGGATTTTGTGGGACAAATTAGCG CCTATTTTAGCCATGTGGACACCCTGCCTAAGTTAAAAGGGGAAATGCTCCAGACTTGGTTAGAACCCATTGCCCAGGTG GTTTTGCCACCCCCCCCTAGTGTCCCCGACGACCCGCCAGAGGATACGACTAAATCAGATTCTCCTAAAGGCGAGCGTCT CGATGATTGGCAAAATCTTGCTAGTCAAGCCGACGGCACAGGTCAAATCGCCGCAAATCTTTGGCTCCAAAGCTTACGGA TTCACCAAGAGCAAATCGAGCAACACCCAAACCTCCAATTTGATTTCGACGCAACAGATCCGCACCAACAGCCCCTCACC CTTGAGAGCGTTAAACCAGCTCTGCCCAGTCTGCCCAGCTTAGCCAGTGGTGATCTCTACATTCTCCATTCCGTCTTGAT CCATGGCCAAATTAGCCGCGCCCATCTGGCCTTGAGTTTAGGGGAATCCCGGAATCGCATCCAAGCACGGATCCAGTGGC TCCTCCGCCAGGGGGTGTTGCGGGAAAATCAAGGGGCCCTCTCCATCCAAGCGGCCCACTATATCCGCCTCAAAAGTGAG CTGGCCAATAACAATTTTTTCGTGGGGGAAGATTAA
Upstream 100 bases:
>100_bases CCCTAAAATGGCGGACAAATTGTGAGCAAATGGGCTTGATAACGATGATTCCTCCGGGAATGGATTGGCGATCGCCCCGT AGCTTTTCCCTACCGATGCC
Downstream 100 bases:
>100_bases TCGATGGGAGTATCCTTTGTGCCGATGTCTGAATGGTTCACCCTCTTAGCCCAGGTTGACCCGCCTGAAAATTTACCCCA AAGACTTTTAACGGATTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MAPLFVDSLKQQFHIWFTQQQATTEEAADLVELPDTLSLQLARQLETLASPEVYCAPVKASITEAIETWQTNLEAPNSFV LLGNPVEPLPKILSESIPRQTFPDLEILTPLDCLQRPLHPRHISQQIQKALELYPQIDLSPGDRQDQPTVNQLEQRQTLV IIPCLEQCFLRCIGGWEGIETLRDITIQNRHCFWIMSCNHWAWDFLDFVGQISAYFSHVDTLPKLKGEMLQTWLEPIAQV VLPPPPSVPDDPPEDTTKSDSPKGERLDDWQNLASQADGTGQIAANLWLQSLRIHQEQIEQHPNLQFDFDATDPHQQPLT LESVKPALPSLPSLASGDLYILHSVLIHGQISRAHLALSLGESRNRIQARIQWLLRQGVLRENQGALSIQAAHYIRLKSE LANNNFFVGED
Sequences:
>Translated_411_residues MAPLFVDSLKQQFHIWFTQQQATTEEAADLVELPDTLSLQLARQLETLASPEVYCAPVKASITEAIETWQTNLEAPNSFV LLGNPVEPLPKILSESIPRQTFPDLEILTPLDCLQRPLHPRHISQQIQKALELYPQIDLSPGDRQDQPTVNQLEQRQTLV IIPCLEQCFLRCIGGWEGIETLRDITIQNRHCFWIMSCNHWAWDFLDFVGQISAYFSHVDTLPKLKGEMLQTWLEPIAQV VLPPPPSVPDDPPEDTTKSDSPKGERLDDWQNLASQADGTGQIAANLWLQSLRIHQEQIEQHPNLQFDFDATDPHQQPLT LESVKPALPSLPSLASGDLYILHSVLIHGQISRAHLALSLGESRNRIQARIQWLLRQGVLRENQGALSIQAAHYIRLKSE LANNNFFVGED >Mature_410_residues APLFVDSLKQQFHIWFTQQQATTEEAADLVELPDTLSLQLARQLETLASPEVYCAPVKASITEAIETWQTNLEAPNSFVL LGNPVEPLPKILSESIPRQTFPDLEILTPLDCLQRPLHPRHISQQIQKALELYPQIDLSPGDRQDQPTVNQLEQRQTLVI IPCLEQCFLRCIGGWEGIETLRDITIQNRHCFWIMSCNHWAWDFLDFVGQISAYFSHVDTLPKLKGEMLQTWLEPIAQVV LPPPPSVPDDPPEDTTKSDSPKGERLDDWQNLASQADGTGQIAANLWLQSLRIHQEQIEQHPNLQFDFDATDPHQQPLTL ESVKPALPSLPSLASGDLYILHSVLIHGQISRAHLALSLGESRNRIQARIQWLLRQGVLRENQGALSIQAAHYIRLKSEL ANNNFFVGED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46492; Mature: 46361
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLFVDSLKQQFHIWFTQQQATTEEAADLVELPDTLSLQLARQLETLASPEVYCAPVKA CCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECHHH SITEAIETWQTNLEAPNSFVLLGNPVEPLPKILSESIPRQTFPDLEILTPLDCLQRPLHP HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHCCCHHHHHCCCCH RHISQQIQKALELYPQIDLSPGDRQDQPTVNQLEQRQTLVIIPCLEQCFLRCIGGWEGIE HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHH TLRDITIQNRHCFWIMSCNHWAWDFLDFVGQISAYFSHVDTLPKLKGEMLQTWLEPIAQV HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VLPPPPSVPDDPPEDTTKSDSPKGERLDDWQNLASQADGTGQIAANLWLQSLRIHQEQIE ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH QHPNLQFDFDATDPHQQPLTLESVKPALPSLPSLASGDLYILHSVLIHGQISRAHLALSL HCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHEEEEC GESRNRIQARIQWLLRQGVLRENQGALSIQAAHYIRLKSELANNNFFVGED CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure APLFVDSLKQQFHIWFTQQQATTEEAADLVELPDTLSLQLARQLETLASPEVYCAPVKA CCHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECHHH SITEAIETWQTNLEAPNSFVLLGNPVEPLPKILSESIPRQTFPDLEILTPLDCLQRPLHP HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHCCCHHHHHCCCCH RHISQQIQKALELYPQIDLSPGDRQDQPTVNQLEQRQTLVIIPCLEQCFLRCIGGWEGIE HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHH TLRDITIQNRHCFWIMSCNHWAWDFLDFVGQISAYFSHVDTLPKLKGEMLQTWLEPIAQV HHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VLPPPPSVPDDPPEDTTKSDSPKGERLDDWQNLASQADGTGQIAANLWLQSLRIHQEQIE ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH QHPNLQFDFDATDPHQQPLTLESVKPALPSLPSLASGDLYILHSVLIHGQISRAHLALSL HCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHEEEEC GESRNRIQARIQWLLRQGVLRENQGALSIQAAHYIRLKSELANNNFFVGED CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA