| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079165
Identifier: 170079165
GI number: 170079165
Start: 2679520
End: 2681295
Strand: Direct
Name: 170079165
Synonym: SYNPCC7002_A2571
Alternate gene names: NA
Gene position: 2679520-2681295 (Clockwise)
Preceding gene: 170079164
Following gene: 170079166
Centisome position: 89.08
GC content: 54.28
Gene sequence:
>1776_bases ATGACTGCACCCCAATCCCCCGCTTTTCCGGCCCACCGTCGCCTCGTGACGGACGATCTCGAAAAACTGCTGACGATTTT GCCCGATGCGATCCGCGATCGCCTCGCCGACCACCCCAATAAAAACGCCCTGATCGAAGTGGTGATGGATCTCGGTCGCA TCCCCGAAGCTCGCTTTGAAAATAGCACCGAAGACCTAGGCGATCGCCCCATTAGCCGCGAAGATTTGCAATATTCCGTA GAGCGGGTGGGGATGTTTAGTGGCGACAACCGGGCGGGCATCGAACGCACCCTGCACCGGATCAGTGCCATGCGTAACCG CCAGGGGGACATCGTCGGTTTAACCTGTCGCATCGGTCGCGCCGTGTTTGGCACGATTTTAATGATCCAGGAACTCGTTG AAAGCGGTAAATCGATTCTCCTGTTGGGACGGCCTGGGGTCGGTAAAACTACGGCGCTGCGGGAAATTGCGCGGGTTCTC GCCGATGACTTTGGCAAACGGGTCGTGATTATCGATACGTCCAATGAAATTGCCGGGGATGGTGATATTCCCCATTCCGC CATTGGTCGCGCCCGCCGGATGCAGGTGGCTACCCCGGAATTGCAACACAAGGTGATGATCGAGGCGGTGGAAAACCATA TGCCTGAAGTGATTATCATCGATGAAATTGGCACCGAACTTGAAGCCCAGGCCGCCAGAACCATTGCCGAACGGGGTGTT CAACTCGTTGGGACCGCCCACGGTAATCGCATCGAAAACCTGATTAAAAACCCCACCCTCTCGGATCTTGTCGGCGGCAT CCAAGCCGTTACCCTGGGGGATGAAGAGGCCCGCAAAAGGCGATCGCAAAAAACTGTCCTCGAACGAAAAGCGCCCCCAA CCTTTGATGTGGCTGTAGAAATGCTAGAACGGCAACGCTGGGTGGTTCATAGCGATGTGTCGATCACCATTGATACCCTC TTGCGAGGTCACCAACCGTTACTGGAAGTCCGCACCGTCGATGATCAAGGCAATGTGAAGATCACCGAGGAAATGGAGCA TCCCGTCGAGATTCCCAACTGGAACCCCCAAACAAAGATGGCCCCTGAACCCAGCCGTCCACGGGGACTGCGTGCTTCTG GCAAAATGGCCCCTCTCCCTTTCGGTAGCCAGAAAAAAAAATTAGTTTCCCCGAGAAGCAACGCCCTCGATCCCCTCATT GATCAATCTTGGATTGCCCGTGATCCACAACAGCAGGAGAAAGTGCGGGTGCCTGGCCCCAACGGTGAAGATTACCCCGT GTATGTCTATCCCTATGGCGTCGGGCGATCGCAGCTAGAGCAAGTGATCGAAATTTTGCGGCTGCCCATCGAACTCACCA AAGATCTCGAAGGGGCCGATGCGGTTTTAGCGTTGCGATCGCAGTTGAAAAATCATTCTAAATTGCGTCAAATCGCCCAA ACTTGCCATGTACCGATCCATGCGGTGAAGTCTAATACAATCCCCCAAATCACGCGGGGTTTGCGGCGCATTTTGAATTT AGATGATCCCCAAAACCAGGAACCGACAGATTTACGGTTATTTGCCCAAAGCAATAGCGACGATGAAATTGATGCCCTCG AAGAAGCCCGTCTAGCAGTGGAGCAAATCGTCATTCCCCAGGGTCAACCCGTGGAACTGCTGCCCCGTTCGGCCAAAATC CGTAAGATGCAGCACGAACTGATTGAGCATTACCGTCTGCAATCATCGAGCTTTGGGGAAGAACCAAACCGTCGCCTGCG GATTTTCCCTGCTTAA
Upstream 100 bases:
>100_bases GCCCCCTCGAAACCGATCCCGAACGCTTTGACCAGGCGATCGCCCACGCCACCCAGTTGATAAATCCATTAAAATCTTCG TTAAACCCAAGCCTTAGTCT
Downstream 100 bases:
>100_bases TTCACCTCTAACGTCGAAGAAGTACTTCTGCCGAAGGTTTCGGCGTTGTATTGCAGTGACACTTCAGCCCCAGGATAGTC AAAGCTGCCGGGGGTGATCG
Product: ATPase like protein
Products: NA
Alternate protein names: AAA ATPase; R3H Domain Protein; ATPase; R3H Domain-Containing Protein; AAA ATPase Superfamily Protein; ATPase-Like Protein; AAA ATPase Central Domain Protein; Stage III Sporulation Protein IIIAA; Sporulation Stage III Protein AA; ATPase Like Protein
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MTAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFENSTEDLGDRPISREDLQYSV ERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVL ADDFGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGV QLVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRWVVHSDVSITIDTL LRGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKMAPEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLI DQSWIARDPQQQEKVRVPGPNGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQ TCHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAVEQIVIPQGQPVELLPRSAKI RKMQHELIEHYRLQSSSFGEEPNRRLRIFPA
Sequences:
>Translated_591_residues MTAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFENSTEDLGDRPISREDLQYSV ERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVL ADDFGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGV QLVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRWVVHSDVSITIDTL LRGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKMAPEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLI DQSWIARDPQQQEKVRVPGPNGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQ TCHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAVEQIVIPQGQPVELLPRSAKI RKMQHELIEHYRLQSSSFGEEPNRRLRIFPA >Mature_590_residues TAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFENSTEDLGDRPISREDLQYSVE RVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVLA DDFGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQ LVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRWVVHSDVSITIDTLL RGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKMAPEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLID QSWIARDPQQQEKVRVPGPNGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQT CHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAVEQIVIPQGQPVELLPRSAKIR KMQHELIEHYRLQSSSFGEEPNRRLRIFPA
Specific function: Unknown
COG id: COG3854
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66141; Mature: 66010
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS51061 R3H
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFE CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCC NSTEDLGDRPISREDLQYSVERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGR CCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHH AVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVLADDFGKRVVIIDTSNEIAGD HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC GDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGV CCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC QLVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVE EEEECCCCHHHHHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHH MLERQRWVVHSDVSITIDTLLRGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKM HHHHCCCEEECCCEEEHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCC APEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLIDQSWIARDPQQQEKVRVPGP CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHCCCCCCCCCEECCCC NGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQ CCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH TCHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAV HHCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH EQIVIPQGQPVELLPRSAKIRKMQHELIEHYRLQSSSFGEEPNRRLRIFPA HHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC >Mature Secondary Structure TAPQSPAFPAHRRLVTDDLEKLLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARFE CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCC NSTEDLGDRPISREDLQYSVERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGR CCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHH AVFGTILMIQELVESGKSILLLGRPGVGKTTALREIARVLADDFGKRVVIIDTSNEIAGD HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC GDIPHSAIGRARRMQVATPELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGV CCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC QLVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVE EEEECCCCHHHHHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHH MLERQRWVVHSDVSITIDTLLRGHQPLLEVRTVDDQGNVKITEEMEHPVEIPNWNPQTKM HHHHCCCEEECCCEEEHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCC APEPSRPRGLRASGKMAPLPFGSQKKKLVSPRSNALDPLIDQSWIARDPQQQEKVRVPGP CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHCCCCCCCCCEECCCC NGEDYPVYVYPYGVGRSQLEQVIEILRLPIELTKDLEGADAVLALRSQLKNHSKLRQIAQ CCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH TCHVPIHAVKSNTIPQITRGLRRILNLDDPQNQEPTDLRLFAQSNSDDEIDALEEARLAV HHCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH EQIVIPQGQPVELLPRSAKIRKMQHELIEHYRLQSSSFGEEPNRRLRIFPA HHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA