| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079145
Identifier: 170079145
GI number: 170079145
Start: 2659008
End: 2660237
Strand: Direct
Name: 170079145
Synonym: SYNPCC7002_A2551
Alternate gene names: NA
Gene position: 2659008-2660237 (Clockwise)
Preceding gene: 170079144
Following gene: 170079147
Centisome position: 88.4
GC content: 43.9
Gene sequence:
>1230_bases ATGGTGCGTTGGCTGAAGCGTCTTTGGCGGAATCTTGTCCGTAAATCGACCCATGTCCGTCAGGAACCACTCAATAAAGT GAGTATTGTAATCCTGATTTTGATCGACATTTTTGTGTTGATCAATGTGTTTCAGGGTCTTGATAGTGTTGGTAACTGGC CCCTTTCGCCCCAGGAACGGTATCCTTGCTACCGCGTTTATCAGACCTATCAAAATAACAATAACTCCGATAAAGACTTT ACCTGGGTAATGGAAATGTTGGGGGATTATCCTTCCCAAGACATTCAGCTTATTAAAACAGAAGGGCGCTTGGGGGAAGT TTCTAGCCAGTGCGATCGCCTTTTGGCCCTCACACCAACGGTAAAAAATCCGGAAACCCTGGCTTTATCCAAAGAGATTC AGAATTTACAAACCCAAATTAATGAAGTCAACCAACGCATTGCCACCTACAAAGAGCAATATGATTCGACGCTTTTAGAA GAAATTGCGGGTCAAGATCCGAATCAATCGATCAACGAAACAACGGCAGCCCAAACGAAGGCGGACATTGAGGCCGCCGA AGCCCAAAAAGCGACCCTGACCGAGACCCTAGATCGTAGAAAAGCCGAGCTTCTTAATCAATCAGAGGTACAAACGTATT TAACGGCCATTGGCGATCGCCAATTTTTTGCCACTTTGAAACAGGATTTTGAACGGGCTGAATTTTGGCACCCCAATCGG CAATTCTTTTTGCAGACCCTTTTCCTCTTACCGCTGATTTTGATTAGCTATTTTTGGCATCGTCAGGCCGTAGAGCGGCA CCGGGGAACCCAGGCGCTTTTAAGTTGGCATTTATTACTTATTTTTCTGATCCCCCTGCTAATTAAAATTCTTCAATTTA TCCAGTTTGGGAATCTAGTGCGGGCAATTTTTGATGTCTTGATCGCAATTTTTGGTGGCTTAGTTTTTATTTCTAGCTAT CTGCTGATCTTGATTATTCCGCTGTTGGGCTTTGGCTTGATTAAATTTCTCCAGCGGTTTGTTTTTAATCCCAAAGTCCA GGCAAAAAGTCGCATTCAAAAACAGCGCTGCATTCAATGTAGTAGTCGGCTCCGCAAAGACGATCAATTTTGTCCTTTTT GTGGATTTGAACAATGGATTAGTTGCCCAAACTGTGCGGCAAAAACCTATAAATACACAGAGTTTTGTCGCCAGTGTGGG GTGGATTTATCGGATTCTCTGCCCCAGTAA
Upstream 100 bases:
>100_bases TGGCCTCCAGAAGGCGCTACAGCAGCAAAGATTTATGACCAAGGTTCCCCCGTTGGGGCTTCTTTTCCTAGAGTAGAGAA AACGACGGGGGACTTATTTT
Downstream 100 bases:
>100_bases ATCTAAAATTATTCAGGCCGCTCTAGGTTTTCTGGGAGGTCAATAAAGACCCTGTCTTCTGGGGTGACGCCCCGGACAAT CTGGGTGCGATCGCCGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MVRWLKRLWRNLVRKSTHVRQEPLNKVSIVILILIDIFVLINVFQGLDSVGNWPLSPQERYPCYRVYQTYQNNNNSDKDF TWVMEMLGDYPSQDIQLIKTEGRLGEVSSQCDRLLALTPTVKNPETLALSKEIQNLQTQINEVNQRIATYKEQYDSTLLE EIAGQDPNQSINETTAAQTKADIEAAEAQKATLTETLDRRKAELLNQSEVQTYLTAIGDRQFFATLKQDFERAEFWHPNR QFFLQTLFLLPLILISYFWHRQAVERHRGTQALLSWHLLLIFLIPLLIKILQFIQFGNLVRAIFDVLIAIFGGLVFISSY LLILIIPLLGFGLIKFLQRFVFNPKVQAKSRIQKQRCIQCSSRLRKDDQFCPFCGFEQWISCPNCAAKTYKYTEFCRQCG VDLSDSLPQ
Sequences:
>Translated_409_residues MVRWLKRLWRNLVRKSTHVRQEPLNKVSIVILILIDIFVLINVFQGLDSVGNWPLSPQERYPCYRVYQTYQNNNNSDKDF TWVMEMLGDYPSQDIQLIKTEGRLGEVSSQCDRLLALTPTVKNPETLALSKEIQNLQTQINEVNQRIATYKEQYDSTLLE EIAGQDPNQSINETTAAQTKADIEAAEAQKATLTETLDRRKAELLNQSEVQTYLTAIGDRQFFATLKQDFERAEFWHPNR QFFLQTLFLLPLILISYFWHRQAVERHRGTQALLSWHLLLIFLIPLLIKILQFIQFGNLVRAIFDVLIAIFGGLVFISSY LLILIIPLLGFGLIKFLQRFVFNPKVQAKSRIQKQRCIQCSSRLRKDDQFCPFCGFEQWISCPNCAAKTYKYTEFCRQCG VDLSDSLPQ >Mature_409_residues MVRWLKRLWRNLVRKSTHVRQEPLNKVSIVILILIDIFVLINVFQGLDSVGNWPLSPQERYPCYRVYQTYQNNNNSDKDF TWVMEMLGDYPSQDIQLIKTEGRLGEVSSQCDRLLALTPTVKNPETLALSKEIQNLQTQINEVNQRIATYKEQYDSTLLE EIAGQDPNQSINETTAAQTKADIEAAEAQKATLTETLDRRKAELLNQSEVQTYLTAIGDRQFFATLKQDFERAEFWHPNR QFFLQTLFLLPLILISYFWHRQAVERHRGTQALLSWHLLLIFLIPLLIKILQFIQFGNLVRAIFDVLIAIFGGLVFISSY LLILIIPLLGFGLIKFLQRFVFNPKVQAKSRIQKQRCIQCSSRLRKDDQFCPFCGFEQWISCPNCAAKTYKYTEFCRQCG VDLSDSLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47559; Mature: 47559
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRWLKRLWRNLVRKSTHVRQEPLNKVSIVILILIDIFVLINVFQGLDSVGNWPLSPQER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YPCYRVYQTYQNNNNSDKDFTWVMEMLGDYPSQDIQLIKTEGRLGEVSSQCDRLLALTPT CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCC VKNPETLALSKEIQNLQTQINEVNQRIATYKEQYDSTLLEEIAGQDPNQSINETTAAQTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ADIEAAEAQKATLTETLDRRKAELLNQSEVQTYLTAIGDRQFFATLKQDFERAEFWHPNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH QFFLQTLFLLPLILISYFWHRQAVERHRGTQALLSWHLLLIFLIPLLIKILQFIQFGNLV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIFDVLIAIFGGLVFISSYLLILIIPLLGFGLIKFLQRFVFNPKVQAKSRIQKQRCIQC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SSRLRKDDQFCPFCGFEQWISCPNCAAKTYKYTEFCRQCGVDLSDSLPQ HHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVRWLKRLWRNLVRKSTHVRQEPLNKVSIVILILIDIFVLINVFQGLDSVGNWPLSPQER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YPCYRVYQTYQNNNNSDKDFTWVMEMLGDYPSQDIQLIKTEGRLGEVSSQCDRLLALTPT CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCC VKNPETLALSKEIQNLQTQINEVNQRIATYKEQYDSTLLEEIAGQDPNQSINETTAAQTK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ADIEAAEAQKATLTETLDRRKAELLNQSEVQTYLTAIGDRQFFATLKQDFERAEFWHPNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH QFFLQTLFLLPLILISYFWHRQAVERHRGTQALLSWHLLLIFLIPLLIKILQFIQFGNLV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAIFDVLIAIFGGLVFISSYLLILIIPLLGFGLIKFLQRFVFNPKVQAKSRIQKQRCIQC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SSRLRKDDQFCPFCGFEQWISCPNCAAKTYKYTEFCRQCGVDLSDSLPQ HHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA