| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is nrfG [C]
Identifier: 170079147
GI number: 170079147
Start: 2661842
End: 2662726
Strand: Direct
Name: nrfG [C]
Synonym: SYNPCC7002_A2553
Alternate gene names: 170079147
Gene position: 2661842-2662726 (Clockwise)
Preceding gene: 170079145
Following gene: 170079148
Centisome position: 88.49
GC content: 53.9
Gene sequence:
>885_bases GTGCCTAAACATCGTTGGTTAGTTGCCCTTGGAGCCTGTGTTAGTGTGTTGTGGATGGGAAATAGTCCTGTGCGATCGCA GGCGGTACTGCCCCTGAGGCGGGATTTTGATCAGGCCCAGATGGAACAGCAGGGGCTGATGCTTATTGAAGATGCCATTC AGCTTTCCCGTTTCCAACAATATGAATGGGCGATTCCCCGGGCCAAACTCGCGACCCAACTGGTGCCAGAACGTTTTGAA GCTTGGTACATTTTGGGCACTCTCCTCGTGCAAGAGCGGGAACTTGATGCCGGGATTCAAGCCCTCACCACAGCCAAACG ACTCAATCCCCGTGAAAGTGGCGTCCATAGTATTTTGGGGTCGGCCTATTTCCAGCAGGAAGATTACGAAGGGGCGCTCC GGTCTCTGAAAACGGCTACCCAGCTTGGGGACAATTCCATTGAAACCCTTTTTGATCTCGGCAATACCCAATACAAACTC AAGCAATACGACGCGGCGATCGCCACCTACAACCAAGCCGTTGCCCTCGATGCCACCTTTTGGCCGGGGATTAATAATAT TGGCTTGATCCAGTACGAACAAGGCAAGGTTGATGCCGCCATTAACAGTTGGCAAAAGGCGATCACCCTCGACCCCACCG CCGCAGAGCCCCAGCTCGCTGTTGCCGTGGCCACCTACGCCAAAGGCGATCGCGCGAAGGGCTTAGAACTGACCCGTACC GCCTTAGATCTCGATGGTCGTTACGGCGAAATTGATTTCCTCGTGGAAAACCTCTGGGGCGAAAAATTGCTCCAGGCCAC CCAAACTGTATTTGATACGCCAACCGTCCAGGCTTTCTTCACAGAACTCGACCGCAGGGCATTTCAACCGGAGATGGAAC CCTAG
Upstream 100 bases:
>100_bases GTCCCCCGTGGGGAATCTTTTTACAATGGTTTTACGTCAATTGCGGGGGAAAGTCGCTAGACTTGGTTTTAAGAATCGTT GTTTCGTGAAGAGTTGAACC
Downstream 100 bases:
>100_bases GGACAAGGGTGCGATACCATAAGCATCACTGCTTCTCTGTTGATGGGAAAACATTGCCGTGGCCCAGGTTGTACTCAACG ATATTCACAAATCTTTCGCG
Product: TPR domain-containing protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR-Repeat Pilus Assembly Protein TadD; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat-Containing Protein; O-Linked N-Acetylglucosamine Transferase; TPR Domain Protein; Tetratricopeptide Repeat Protein; Peptidase; Secreted Tetratricopeptide Protein; Tetratricopeptide Repeat Family; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; Flp Pilus Assembly Protein TadD TPR Repeat Protein; Flp Pilus Assembly Protein TadD
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MPKHRWLVALGACVSVLWMGNSPVRSQAVLPLRRDFDQAQMEQQGLMLIEDAIQLSRFQQYEWAIPRAKLATQLVPERFE AWYILGTLLVQERELDAGIQALTTAKRLNPRESGVHSILGSAYFQQEDYEGALRSLKTATQLGDNSIETLFDLGNTQYKL KQYDAAIATYNQAVALDATFWPGINNIGLIQYEQGKVDAAINSWQKAITLDPTAAEPQLAVAVATYAKGDRAKGLELTRT ALDLDGRYGEIDFLVENLWGEKLLQATQTVFDTPTVQAFFTELDRRAFQPEMEP
Sequences:
>Translated_294_residues MPKHRWLVALGACVSVLWMGNSPVRSQAVLPLRRDFDQAQMEQQGLMLIEDAIQLSRFQQYEWAIPRAKLATQLVPERFE AWYILGTLLVQERELDAGIQALTTAKRLNPRESGVHSILGSAYFQQEDYEGALRSLKTATQLGDNSIETLFDLGNTQYKL KQYDAAIATYNQAVALDATFWPGINNIGLIQYEQGKVDAAINSWQKAITLDPTAAEPQLAVAVATYAKGDRAKGLELTRT ALDLDGRYGEIDFLVENLWGEKLLQATQTVFDTPTVQAFFTELDRRAFQPEMEP >Mature_293_residues PKHRWLVALGACVSVLWMGNSPVRSQAVLPLRRDFDQAQMEQQGLMLIEDAIQLSRFQQYEWAIPRAKLATQLVPERFEA WYILGTLLVQERELDAGIQALTTAKRLNPRESGVHSILGSAYFQQEDYEGALRSLKTATQLGDNSIETLFDLGNTQYKLK QYDAAIATYNQAVALDATFWPGINNIGLIQYEQGKVDAAINSWQKAITLDPTAAEPQLAVAVATYAKGDRAKGLELTRTA LDLDGRYGEIDFLVENLWGEKLLQATQTVFDTPTVQAFFTELDRRAFQPEMEP
Specific function: Required For Formate-Dependent Nitrite Reduction. Not Required For The Biosynthesis Of Any Of The C-Type Cytochromes Nor For The Secretion Of The Periplasmic Cytochromes. [C]
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI115532692, Length=219, Percent_Identity=24.6575342465753, Blast_Score=64, Evalue=7e-11, Organism=Caenorhabditis elegans, GI115532690, Length=219, Percent_Identity=24.6575342465753, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33002; Mature: 32871
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKHRWLVALGACVSVLWMGNSPVRSQAVLPLRRDFDQAQMEQQGLMLIEDAIQLSRFQQ CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHH YEWAIPRAKLATQLVPERFEAWYILGTLLVQERELDAGIQALTTAKRLNPRESGVHSILG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SAYFQQEDYEGALRSLKTATQLGDNSIETLFDLGNTQYKLKQYDAAIATYNQAVALDATF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHHHCCCEEEEEEEE WPGINNIGLIQYEQGKVDAAINSWQKAITLDPTAAEPQLAVAVATYAKGDRAKGLELTRT CCCCCCCEEEEEECCCHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHH ALDLDGRYGEIDFLVENLWGEKLLQATQTVFDTPTVQAFFTELDRRAFQPEMEP HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PKHRWLVALGACVSVLWMGNSPVRSQAVLPLRRDFDQAQMEQQGLMLIEDAIQLSRFQQ CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHH YEWAIPRAKLATQLVPERFEAWYILGTLLVQERELDAGIQALTTAKRLNPRESGVHSILG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SAYFQQEDYEGALRSLKTATQLGDNSIETLFDLGNTQYKLKQYDAAIATYNQAVALDATF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHHHCCCEEEEEEEE WPGINNIGLIQYEQGKVDAAINSWQKAITLDPTAAEPQLAVAVATYAKGDRAKGLELTRT CCCCCCCEEEEEECCCHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHH ALDLDGRYGEIDFLVENLWGEKLLQATQTVFDTPTVQAFFTELDRRAFQPEMEP HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA