| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ubiB [C]
Identifier: 170079137
GI number: 170079137
Start: 2648333
End: 2650054
Strand: Direct
Name: ubiB [C]
Synonym: SYNPCC7002_A2543
Alternate gene names: 170079137
Gene position: 2648333-2650054 (Clockwise)
Preceding gene: 170079136
Following gene: 170079138
Centisome position: 88.04
GC content: 49.36
Gene sequence:
>1722_bases GTGACCCAGTATCCTTCCGTTGCCCCCGACCACAAACTTGGTTCTACCACCTTGACCCGCTATGACGCCAAGGCGATCGC CAAACATTACCGTTGGCGACCCTGGCAATCCCTGTGGCGGGCCTTTACGATCATTTGGTTATTTGGGTGGTTTTCCTTCA AATTGTGGCTAGATAGTAAACGCGAAGAAGAACCCGAAACCCGCGCCCGTCGCGCCAACGAACTGCGTGAAATTCTGACC CGCTTAGGGCCGACATTTATCAAAGTAGGGCAAGCCCTTTCAACCCGGCCAGACTTGATTCGTCCCGACTTTCTCGAAGA ATTAATCAAGCTCCAAGACCAACTGCCTTCTTTTGATAACGAGATTGCCTTTGCGATTATTGAAAAAGATCTCGGTCGTC CCGTCGATGACATTTACCAAGAAATTTCCCCCCATCCCGTCGCGGCAGCCAGCCTCGCCCAGGTCTATCGGGCACGTTTG TATAGTGGCGAAGAAGTTGCCGTTAAGGTACAACGTCCCAAATTACTCCCGCTGCTGACCCTTGATTTGTACCTGATGCG TTTAGGGGCAAGCCTGTTTGCCCCCTATCTTCCCCTTAATTTGGGCCATGACTTGACGTTAATTGTTGATGAATTTGGCA CCAAGCTTTTTGAAGAAATTGATTACATTAACGAAGGTCGCAACGCCGAGAAATTTGCCGCTAATTTTCGCGATGATCCC ACTGTTAAAGTCCCTGCCATTTATTGGGAATATACAAGCCATCGCCTCCTTACCTTAGAGTGGATTCAAGGTTATAAGCT CAACGAATTAGACCGCATCCGTGCCGCTGGCCTAGACCCGAATCGAATCATTGAAATTGGTGTGACCACAGGGCTACGGC AATTGTTAGAACATGGGTTTTTCCATGCCGATCCCCACCCTGGTAATTTGTTTGCCACCTTTGATGGACGAATGGCTTAC ATCGACTTCGGCATGATGGATCAGTTGGACAACACCACCAAAGAGACCATTGCCAGTTCCGTCGTACAGCTGATCAACCA GGATTATCAAACCCTCGCGAAGGATTTTGTGGAATTGGGTTTCCTCGCTCCGAAAACAGACATCCGCCCGATTATTCCGG CCTTAGAAAAGGTTTTAGGGAAAGCGGTGGGGGAAAGTGTCGGTGATTTTAACTTTAAGACGATTACCGATGAATTTTCG GCGCTGATGTATGAATATCCGTTCCGGGTGCCGGCCAAGTTTGCGTTGATTATCCGCTCCCTTGTGACCCAGGAGGGATT GGCCCTGAGTCTAAATCCGGATTTCAAGATCGTCGAAATTTCCTATCCTTACGTTTCTCGACGCTTGCTAACTGCCGAAA CCCCAGAGCTACGCCGCAAGCTCTTAGAGGTGCTCTTTAAAGACGGAAAATTCCAATGGCATCGCCTCGAAAATATGTTG GCGATCGCCCAGGCCGATAATCAGTTTGATATTTTACCCACGGCCCAAATGGGTTTTCAATATCTAATGTCCGAAGAGGG TGCAGAAATTCGGCGGATGATCCTCCTGGCCTTAACGGAAGACGATCGCCTCCATACCGAAGAAGTACAACGACTCTGGG CGCTCCTGAAAGACGAATTTCAACCCCAAAAATTACTGGGGGCCGCCTGGTCAAATCTCCGCCAATTTTCCGGTGAGCGT TTAACGGCTGTTTTGCCGAGTTTCGCCCAATCTCGGTCATAA
Upstream 100 bases:
>100_bases CCCGATGCAGGCTTGGTTTGGTGTCGCTGCGAAAAATTTCGATACAATATAGTGTGATTTACTTTACAAAACCACACAAT TCATTGACGGCGAAACCACT
Downstream 100 bases:
>100_bases TGAAGGCTAGTTAATAAAGTTTTGTTAAAAAATCCATGGAAGAATATTATTACTATTACATTCCCCAGCCGCCGTTTTTG TTGGTAGGCCTTGGCTTGTT
Product: hypothetical protein
Products: 2-octaprenyl-6-hydroxyphenol [C]
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MTQYPSVAPDHKLGSTTLTRYDAKAIAKHYRWRPWQSLWRAFTIIWLFGWFSFKLWLDSKREEEPETRARRANELREILT RLGPTFIKVGQALSTRPDLIRPDFLEELIKLQDQLPSFDNEIAFAIIEKDLGRPVDDIYQEISPHPVAAASLAQVYRARL YSGEEVAVKVQRPKLLPLLTLDLYLMRLGASLFAPYLPLNLGHDLTLIVDEFGTKLFEEIDYINEGRNAEKFAANFRDDP TVKVPAIYWEYTSHRLLTLEWIQGYKLNELDRIRAAGLDPNRIIEIGVTTGLRQLLEHGFFHADPHPGNLFATFDGRMAY IDFGMMDQLDNTTKETIASSVVQLINQDYQTLAKDFVELGFLAPKTDIRPIIPALEKVLGKAVGESVGDFNFKTITDEFS ALMYEYPFRVPAKFALIIRSLVTQEGLALSLNPDFKIVEISYPYVSRRLLTAETPELRRKLLEVLFKDGKFQWHRLENML AIAQADNQFDILPTAQMGFQYLMSEEGAEIRRMILLALTEDDRLHTEEVQRLWALLKDEFQPQKLLGAAWSNLRQFSGER LTAVLPSFAQSRS
Sequences:
>Translated_573_residues MTQYPSVAPDHKLGSTTLTRYDAKAIAKHYRWRPWQSLWRAFTIIWLFGWFSFKLWLDSKREEEPETRARRANELREILT RLGPTFIKVGQALSTRPDLIRPDFLEELIKLQDQLPSFDNEIAFAIIEKDLGRPVDDIYQEISPHPVAAASLAQVYRARL YSGEEVAVKVQRPKLLPLLTLDLYLMRLGASLFAPYLPLNLGHDLTLIVDEFGTKLFEEIDYINEGRNAEKFAANFRDDP TVKVPAIYWEYTSHRLLTLEWIQGYKLNELDRIRAAGLDPNRIIEIGVTTGLRQLLEHGFFHADPHPGNLFATFDGRMAY IDFGMMDQLDNTTKETIASSVVQLINQDYQTLAKDFVELGFLAPKTDIRPIIPALEKVLGKAVGESVGDFNFKTITDEFS ALMYEYPFRVPAKFALIIRSLVTQEGLALSLNPDFKIVEISYPYVSRRLLTAETPELRRKLLEVLFKDGKFQWHRLENML AIAQADNQFDILPTAQMGFQYLMSEEGAEIRRMILLALTEDDRLHTEEVQRLWALLKDEFQPQKLLGAAWSNLRQFSGER LTAVLPSFAQSRS >Mature_572_residues TQYPSVAPDHKLGSTTLTRYDAKAIAKHYRWRPWQSLWRAFTIIWLFGWFSFKLWLDSKREEEPETRARRANELREILTR LGPTFIKVGQALSTRPDLIRPDFLEELIKLQDQLPSFDNEIAFAIIEKDLGRPVDDIYQEISPHPVAAASLAQVYRARLY SGEEVAVKVQRPKLLPLLTLDLYLMRLGASLFAPYLPLNLGHDLTLIVDEFGTKLFEEIDYINEGRNAEKFAANFRDDPT VKVPAIYWEYTSHRLLTLEWIQGYKLNELDRIRAAGLDPNRIIEIGVTTGLRQLLEHGFFHADPHPGNLFATFDGRMAYI DFGMMDQLDNTTKETIASSVVQLINQDYQTLAKDFVELGFLAPKTDIRPIIPALEKVLGKAVGESVGDFNFKTITDEFSA LMYEYPFRVPAKFALIIRSLVTQEGLALSLNPDFKIVEISYPYVSRRLLTAETPELRRKLLEVLFKDGKFQWHRLENMLA IAQADNQFDILPTAQMGFQYLMSEEGAEIRRMILLALTEDDRLHTEEVQRLWALLKDEFQPQKLLGAAWSNLRQFSGERL TAVLPSFAQSRS
Specific function: Required, Probably Indirectly, For The Hydroxylation Of 2-Octaprenylphenol To 2-Octaprenyl-6-Hydroxy-Phenol, The Fourth Step In Ubiquinone Biosynthesis. Specific For Aerobically Grown Log-Phase Cells. [C]
COG id: COG0661
COG function: function code R; Predicted unusual protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the protein kinase superfamily. ADCK protein kinase family [H]
Homologues:
Organism=Homo sapiens, GI40254938, Length=265, Percent_Identity=32.8301886792453, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI41393593, Length=270, Percent_Identity=30.7407407407407, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI217035081, Length=248, Percent_Identity=31.0483870967742, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI34147522, Length=302, Percent_Identity=26.158940397351, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI27363457, Length=299, Percent_Identity=26.4214046822742, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI32261307, Length=316, Percent_Identity=21.2025316455696, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI217416386, Length=241, Percent_Identity=27.3858921161826, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI2367309, Length=380, Percent_Identity=30, Blast_Score=184, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17559152, Length=305, Percent_Identity=29.8360655737705, Blast_Score=145, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6323282, Length=242, Percent_Identity=30.1652892561983, Blast_Score=113, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6321319, Length=244, Percent_Identity=30.7377049180328, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6325148, Length=292, Percent_Identity=24.3150684931507, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI22024280, Length=263, Percent_Identity=33.4600760456274, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24662575, Length=264, Percent_Identity=35.6060606060606, Blast_Score=144, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004147 - InterPro: IPR011009 - InterPro: IPR000719 [H]
Pfam domain/function: PF03109 ABC1 [H]
EC number: NA
Molecular weight: Translated: 65923; Mature: 65791
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQYPSVAPDHKLGSTTLTRYDAKAIAKHYRWRPWQSLWRAFTIIWLFGWFSFKLWLDSK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCC REEEPETRARRANELREILTRLGPTFIKVGQALSTRPDLIRPDFLEELIKLQDQLPSFDN CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC EIAFAIIEKDLGRPVDDIYQEISPHPVAAASLAQVYRARLYSGEEVAVKVQRPKLLPLLT CHHHEEHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH LDLYLMRLGASLFAPYLPLNLGHDLTLIVDEFGTKLFEEIDYINEGRNAEKFAANFRDDP HHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC TVKVPAIYWEYTSHRLLTLEWIQGYKLNELDRIRAAGLDPNRIIEIGVTTGLRQLLEHGF CEEECEEEEEECCCEEEEEHHHCCCCCCHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCC FHADPHPGNLFATFDGRMAYIDFGMMDQLDNTTKETIASSVVQLINQDYQTLAKDFVELG CCCCCCCCCEEEEECCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FLAPKTDIRPIIPALEKVLGKAVGESVGDFNFKTITDEFSALMYEYPFRVPAKFALIIRS CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH LVTQEGLALSLNPDFKIVEISYPYVSRRLLTAETPELRRKLLEVLFKDGKFQWHRLENML HHHCCCEEEEECCCEEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH AIAQADNQFDILPTAQMGFQYLMSEEGAEIRRMILLALTEDDRLHTEEVQRLWALLKDEF HHHCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCC QPQKLLGAAWSNLRQFSGERLTAVLPSFAQSRS CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TQYPSVAPDHKLGSTTLTRYDAKAIAKHYRWRPWQSLWRAFTIIWLFGWFSFKLWLDSK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCC REEEPETRARRANELREILTRLGPTFIKVGQALSTRPDLIRPDFLEELIKLQDQLPSFDN CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCC EIAFAIIEKDLGRPVDDIYQEISPHPVAAASLAQVYRARLYSGEEVAVKVQRPKLLPLLT CHHHEEHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH LDLYLMRLGASLFAPYLPLNLGHDLTLIVDEFGTKLFEEIDYINEGRNAEKFAANFRDDP HHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC TVKVPAIYWEYTSHRLLTLEWIQGYKLNELDRIRAAGLDPNRIIEIGVTTGLRQLLEHGF CEEECEEEEEECCCEEEEEHHHCCCCCCHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCC FHADPHPGNLFATFDGRMAYIDFGMMDQLDNTTKETIASSVVQLINQDYQTLAKDFVELG CCCCCCCCCEEEEECCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FLAPKTDIRPIIPALEKVLGKAVGESVGDFNFKTITDEFSALMYEYPFRVPAKFALIIRS CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH LVTQEGLALSLNPDFKIVEISYPYVSRRLLTAETPELRRKLLEVLFKDGKFQWHRLENML HHHCCCEEEEECCCEEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH AIAQADNQFDILPTAQMGFQYLMSEEGAEIRRMILLALTEDDRLHTEEVQRLWALLKDEF HHHCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCC QPQKLLGAAWSNLRQFSGERLTAVLPSFAQSRS CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2 2-octaprenylphenol; O2 [C]
Specific reaction: 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]