| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is fur [H]
Identifier: 170079093
GI number: 170079093
Start: 2601656
End: 2602078
Strand: Reverse
Name: fur [H]
Synonym: SYNPCC7002_A2498
Alternate gene names: 170079093
Gene position: 2602078-2601656 (Counterclockwise)
Preceding gene: 170079094
Following gene: 170079092
Centisome position: 86.5
GC content: 48.23
Gene sequence:
>423_bases ATGTCCAAGAAACTCACTAAAAACCAACGCACCATTCTCCAGCTCATCCAAGCCAAAGAAACCGAAACCAGCGCCCAAAA TCTCCATTTCGAGATGCAGCAAACGGGCCTAAAAATCGGTTTAGCCACCGTTTATCGCGCCCTGAAATTACTGAAAGTCG AGGGCAAAATCCAAGAGCGGGTCACCCCAGAGGGAGAATCGTTCTATAGCAAAATTGGCATGACCGAACACCACCACCAC CATTTAAACTGCGTCAACTGCGGCCAATCTTACCCCCTCGATAGTTGTCCCATTAGTCAAAAAATTACCGACTGGTGCCA AACCCAGAAGTTCAAGGTCTATTACCACACCCTCGAATTCTTTGGCCTCTGCGCCGACTGTCAGACTCAGGCCGATAATG CTGAATGTTTTAACGCCAACTGA
Upstream 100 bases:
>100_bases CTTCGGGGGCAACGATTATCCTAGTTTCAGGGATTGCCTATCTCCTGAGCCTCGGACTCAAAGCCTACGGCGATCGCCAA TCCACCCAACCAGAAGCCTA
Downstream 100 bases:
>100_bases TAATAGGCTTCAGCATGGTCAATTAATTCCGCTGCTTGGGTCTCCCCCACATCCTTGAGGCGCTTGGCAGGAATGCCCAC CATGAGCGATCGCCCTGGGA
Product: ferric uptake regulation protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSKKLTKNQRTILQLIQAKETETSAQNLHFEMQQTGLKIGLATVYRALKLLKVEGKIQERVTPEGESFYSKIGMTEHHHH HLNCVNCGQSYPLDSCPISQKITDWCQTQKFKVYYHTLEFFGLCADCQTQADNAECFNAN
Sequences:
>Translated_140_residues MSKKLTKNQRTILQLIQAKETETSAQNLHFEMQQTGLKIGLATVYRALKLLKVEGKIQERVTPEGESFYSKIGMTEHHHH HLNCVNCGQSYPLDSCPISQKITDWCQTQKFKVYYHTLEFFGLCADCQTQADNAECFNAN >Mature_139_residues SKKLTKNQRTILQLIQAKETETSAQNLHFEMQQTGLKIGLATVYRALKLLKVEGKIQERVTPEGESFYSKIGMTEHHHHH LNCVNCGQSYPLDSCPISQKITDWCQTQKFKVYYHTLEFFGLCADCQTQADNAECFNAN
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16042; Mature: 15911
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLTKNQRTILQLIQAKETETSAQNLHFEMQQTGLKIGLATVYRALKLLKVEGKIQER CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHC VTPEGESFYSKIGMTEHHHHHLNCVNCGQSYPLDSCPISQKITDWCQTQKFKVYYHTLEF CCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH FGLCADCQTQADNAECFNAN HHHHHCCCCCCCCCEEECCC >Mature Secondary Structure SKKLTKNQRTILQLIQAKETETSAQNLHFEMQQTGLKIGLATVYRALKLLKVEGKIQER CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHC VTPEGESFYSKIGMTEHHHHHLNCVNCGQSYPLDSCPISQKITDWCQTQKFKVYYHTLEF CCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH FGLCADCQTQADNAECFNAN HHHHHCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA