Click here to switch to the map view.

The map label for this gene is yjbQ [C]

Identifier: 170079092

GI number: 170079092

Start: 2600688

End: 2601113

Strand: Reverse

Name: yjbQ [C]

Synonym: SYNPCC7002_A2497

Alternate gene names: 170079092

Gene position: 2601113-2600688 (Counterclockwise)

Preceding gene: 170079093

Following gene: 170079088

Centisome position: 86.47

GC content: 48.83

Gene sequence:

>426_bases
ATGCTGCACCAACATCAAAGAGCCTTACAAATCCAAACCCAAGGGAAATCTCTCCATAAAATTACGGCCAAAATCGAGTC
CTATGTGGCGGAATCGGGGATAAAAATGGGATTATGCGTCGTGTTTGTGCGCCACACTTCAGCCTCGTTAATCATTCAAG
AAAATGCGGATCCGGATGTGTTGTTAGATTTAGAAAACTTCATGGCGAGATTGGTGCCAGAGGATGGCCACTCCTATATC
CACAGCGCCGAAGGCCCCGATGATATGCCTGCCCATATCCGCTCGGTGCTAACCAAAACCGCTGAACAAATTCCCATTGC
CAATGGTCGCTTGGTGTTGGGGACGTGGCAGGGCATTTATCTCTGGGAGCACCGCAGTTATCGCCATACCAGGGAAGTGG
TGGTGCATATTTACGGGGAAAAATAA

Upstream 100 bases:

>100_bases
GGGTGGCAAGGGAAACATTAGACCAGGTGGACATGGTGGCTGTTGGCTCATTTTTCCCTATTCTAAAATGAGTTAGCCCG
CATTTTTTTACTGCCCCCCC

Downstream 100 bases:

>100_bases
TCCTTGAGAGAGTCGAGATCTAACTGAATTTTGGTGTCGATTAGTTGCCCTTGGGATAAGAGGCGATCGCCACTGACCCA
AGCTTGCTCCACGATGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLHQHQRALQIQTQGKSLHKITAKIESYVAESGIKMGLCVVFVRHTSASLIIQENADPDVLLDLENFMARLVPEDGHSYI
HSAEGPDDMPAHIRSVLTKTAEQIPIANGRLVLGTWQGIYLWEHRSYRHTREVVVHIYGEK

Sequences:

>Translated_141_residues
MLHQHQRALQIQTQGKSLHKITAKIESYVAESGIKMGLCVVFVRHTSASLIIQENADPDVLLDLENFMARLVPEDGHSYI
HSAEGPDDMPAHIRSVLTKTAEQIPIANGRLVLGTWQGIYLWEHRSYRHTREVVVHIYGEK
>Mature_141_residues
MLHQHQRALQIQTQGKSLHKITAKIESYVAESGIKMGLCVVFVRHTSASLIIQENADPDVLLDLENFMARLVPEDGHSYI
HSAEGPDDMPAHIRSVLTKTAEQIPIANGRLVLGTWQGIYLWEHRSYRHTREVVVHIYGEK

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=137, Percent_Identity=39.4160583941606, Blast_Score=110, Evalue=3e-26,
Organism=Drosophila melanogaster, GI221476594, Length=135, Percent_Identity=42.2222222222222, Blast_Score=117, Evalue=3e-27,
Organism=Drosophila melanogaster, GI221476589, Length=135, Percent_Identity=42.2222222222222, Blast_Score=116, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15989; Mature: 15989

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQHQRALQIQTQGKSLHKITAKIESYVAESGIKMGLCVVFVRHTSASLIIQENADPDV
CCCCCCHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCE
LLDLENFMARLVPEDGHSYIHSAEGPDDMPAHIRSVLTKTAEQIPIANGRLVLGTWQGIY
EEEHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEE
LWEHRSYRHTREVVVHIYGEK
EEECCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MLHQHQRALQIQTQGKSLHKITAKIESYVAESGIKMGLCVVFVRHTSASLIIQENADPDV
CCCCCCHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCE
LLDLENFMARLVPEDGHSYIHSAEGPDDMPAHIRSVLTKTAEQIPIANGRLVLGTWQGIY
EEEHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEE
LWEHRSYRHTREVVVHIYGEK
EEECCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]