Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is paaY [C]

Identifier: 170079091

GI number: 170079091

Start: 2601099

End: 2601692

Strand: Direct

Name: paaY [C]

Synonym: SYNPCC7002_A2496

Alternate gene names: 170079091

Gene position: 2601099-2601692 (Clockwise)

Preceding gene: 170079090

Following gene: 170079098

Centisome position: 86.47

GC content: 53.2

Gene sequence:

>594_bases
ATGTTGGTGCAGCATGGGGGGGCAGTAAAAAAATGCGGGCTAACTCATTTTAGAATAGGGAAAAATGAGCCAACAGCCAC
CATGTCCACCTGGTCTAATGTTTCCCTTGCCACCCCTGATCTGAGCCAAGCGGCCTTTGTGGCTTCTAATGCTACCGTGA
TCGGCAATGTCAGCCTCGCCGAGGGATCAAGCATTTGGTACGGGGCAGTGGTGCGGGGTGACCTAGAGGCGATTCAGATT
GGTCGTTTTAGCAATGTCCAGGATGGGGCGGTACTCCATGGTGATCCGGGTAAACAGACGGTGCTTGAAGATTACGTCAC
CATCGGCCATAAAGCAGTGATCCACAGTGCCCACATTGAACAAGGCTGCCTAATTGGTATTGGGGCGATTGTTTTAGATG
GGGTGCGGGTCGGCGCGGGCAGTATTATCGGCGCGGGTTGTGTCGTCACAAAGGATGTCCCAGGGCGATCGCTCATGGTG
GGCATTCCTGCCAAGCGCCTCAAGGATGTGGGGGAGACCCAAGCAGCGGAATTAATTGACCATGCTGAAGCCTATTATCA
GTTGGCGTTAAAACATTCAGCATTATCGGCCTGA

Upstream 100 bases:

>100_bases
ATAATCCCATTTTTATCCCCGATTCCGCCACATAGGACTCGATTTTGGCCGTAATTTTATGGAGAGATTTCCCTTGGGTT
TGGATTTGTAAGGCTCTTTG

Downstream 100 bases:

>100_bases
GTCTGACAGTCGGCGCAGAGGCCAAAGAATTCGAGGGTGTGGTAATAGACCTTGAACTTCTGGGTTTGGCACCAGTCGGT
AATTTTTTGACTAATGGGAC

Product: ferripyochelin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLVQHGGAVKKCGLTHFRIGKNEPTATMSTWSNVSLATPDLSQAAFVASNATVIGNVSLAEGSSIWYGAVVRGDLEAIQI
GRFSNVQDGAVLHGDPGKQTVLEDYVTIGHKAVIHSAHIEQGCLIGIGAIVLDGVRVGAGSIIGAGCVVTKDVPGRSLMV
GIPAKRLKDVGETQAAELIDHAEAYYQLALKHSALSA

Sequences:

>Translated_197_residues
MLVQHGGAVKKCGLTHFRIGKNEPTATMSTWSNVSLATPDLSQAAFVASNATVIGNVSLAEGSSIWYGAVVRGDLEAIQI
GRFSNVQDGAVLHGDPGKQTVLEDYVTIGHKAVIHSAHIEQGCLIGIGAIVLDGVRVGAGSIIGAGCVVTKDVPGRSLMV
GIPAKRLKDVGETQAAELIDHAEAYYQLALKHSALSA
>Mature_197_residues
MLVQHGGAVKKCGLTHFRIGKNEPTATMSTWSNVSLATPDLSQAAFVASNATVIGNVSLAEGSSIWYGAVVRGDLEAIQI
GRFSNVQDGAVLHGDPGKQTVLEDYVTIGHKAVIHSAHIEQGCLIGIGAIVLDGVRVGAGSIIGAGCVVTKDVPGRSLMV
GIPAKRLKDVGETQAAELIDHAEAYYQLALKHSALSA

Specific function: Phenylacetic acid aerobic catabolism. [C]

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1787667, Length=141, Percent_Identity=36.1702127659575, Blast_Score=93, Evalue=9e-21,
Organism=Escherichia coli, GI87082240, Length=157, Percent_Identity=35.6687898089172, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87081681, Length=138, Percent_Identity=31.1594202898551, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 20421; Mature: 20421

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVQHGGAVKKCGLTHFRIGKNEPTATMSTWSNVSLATPDLSQAAFVASNATVIGNVSLA
CEECCCCCHHHCCCEEEEECCCCCCEEEECCCCCEEECCCCCCCEEEECCCEEEEEEEEC
EGSSIWYGAVVRGDLEAIQIGRFSNVQDGAVLHGDPGKQTVLEDYVTIGHKAVIHSAHIE
CCCCEEEEEEEECCCEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCHHEEECCCCC
QGCLIGIGAIVLDGVRVGAGSIIGAGCVVTKDVPGRSLMVGIPAKRLKDVGETQAAELID
CCEEEEEHHHHHCCEEECCCCEEECCEEEECCCCCCEEEEECCHHHHHHCCCHHHHHHHH
HAEAYYQLALKHSALSA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLVQHGGAVKKCGLTHFRIGKNEPTATMSTWSNVSLATPDLSQAAFVASNATVIGNVSLA
CEECCCCCHHHCCCEEEEECCCCCCEEEECCCCCEEECCCCCCCEEEECCCEEEEEEEEC
EGSSIWYGAVVRGDLEAIQIGRFSNVQDGAVLHGDPGKQTVLEDYVTIGHKAVIHSAHIE
CCCCEEEEEEEECCCEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCHHEEECCCCC
QGCLIGIGAIVLDGVRVGAGSIIGAGCVVTKDVPGRSLMVGIPAKRLKDVGETQAAELID
CCEEEEEHHHHHCCEEECCCCEEECCEEEECCCCCCEEEEECCHHHHHHCCCHHHHHHHH
HAEAYYQLALKHSALSA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]