| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079090
Identifier: 170079090
GI number: 170079090
Start: 2600161
End: 2600703
Strand: Direct
Name: 170079090
Synonym: SYNPCC7002_A2495
Alternate gene names: NA
Gene position: 2600161-2600703 (Clockwise)
Preceding gene: 170079089
Following gene: 170079091
Centisome position: 86.44
GC content: 51.38
Gene sequence:
>543_bases ATGGCACAACTCGCAACGGCAGAAAACGGCTGGGTGGATACAACTAAGGCCACCGATCCAGAGGCGATCGCCCTCGTCAA AGATTTACTCGACACGCAGATTTATTGCAGCCTCAGCACCTGTTCGCCGGTTGGCTTGCCCTGGAGTAGCCCGTTACTTT TTGTTTGGGATCAGGGTTTAAAACTCTATTGGTCATCGGCGATCGCCGCCCAACATTCCCAAAATCTTTACCAGAACCAA GGCCGGGCGATGGTCACAGTTTATGATCCTAGTCGCATTAAGGCCGCCTTTTTCGCAGGAATTGCCACAGAATTAACCGA ATCGGAACTTCTACGGCAAGTTTTAAGCCGATTCGACCAGCGCGCCCAACGACCGACACCCAGGCAAGCAGCAGATTATC TTGACGACTCCCCGCGCCGAATGTACCAATTCATCGTGGAGCAAGCTTGGGTCAGTGGCGATCGCCTCTTATCCCAAGGG CAACTAATCGACACCAAAATTCAGTTAGATCTCGACTCTCTCAAGGATTATTTTTCCCCGTAA
Upstream 100 bases:
>100_bases CCAGATGGTGGAAACCTTCACGATTGAGTCGCTCCAGCGTTTAGTGCGACAGTATCTTTCCCCGGAACACTACGGTATCG TCACTTTAACCGGTACTTAA
Downstream 100 bases:
>100_bases ATATGCACCACCACTTCCCTGGTATGGCGATAACTGCGGTGCTCCCAGAGATAAATGCCCTGCCACGTCCCCAACACCAA GCGACCATTGGCAATGGGAA
Product: pyridoxamine 5'-phosphate oxidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAQLATAENGWVDTTKATDPEAIALVKDLLDTQIYCSLSTCSPVGLPWSSPLLFVWDQGLKLYWSSAIAAQHSQNLYQNQ GRAMVTVYDPSRIKAAFFAGIATELTESELLRQVLSRFDQRAQRPTPRQAADYLDDSPRRMYQFIVEQAWVSGDRLLSQG QLIDTKIQLDLDSLKDYFSP
Sequences:
>Translated_180_residues MAQLATAENGWVDTTKATDPEAIALVKDLLDTQIYCSLSTCSPVGLPWSSPLLFVWDQGLKLYWSSAIAAQHSQNLYQNQ GRAMVTVYDPSRIKAAFFAGIATELTESELLRQVLSRFDQRAQRPTPRQAADYLDDSPRRMYQFIVEQAWVSGDRLLSQG QLIDTKIQLDLDSLKDYFSP >Mature_179_residues AQLATAENGWVDTTKATDPEAIALVKDLLDTQIYCSLSTCSPVGLPWSSPLLFVWDQGLKLYWSSAIAAQHSQNLYQNQG RAMVTVYDPSRIKAAFFAGIATELTESELLRQVLSRFDQRAQRPTPRQAADYLDDSPRRMYQFIVEQAWVSGDRLLSQGQ LIDTKIQLDLDSLKDYFSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20281; Mature: 20150
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLATAENGWVDTTKATDPEAIALVKDLLDTQIYCSLSTCSPVGLPWSSPLLFVWDQGL CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEECCH KLYWSSAIAAQHSQNLYQNQGRAMVTVYDPSRIKAAFFAGIATELTESELLRQVLSRFDQ HHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQRPTPRQAADYLDDSPRRMYQFIVEQAWVSGDRLLSQGQLIDTKIQLDLDSLKDYFSP HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCEEEEEEEEEHHHHHHHCCC >Mature Secondary Structure AQLATAENGWVDTTKATDPEAIALVKDLLDTQIYCSLSTCSPVGLPWSSPLLFVWDQGL CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEECCH KLYWSSAIAAQHSQNLYQNQGRAMVTVYDPSRIKAAFFAGIATELTESELLRQVLSRFDQ HHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAQRPTPRQAADYLDDSPRRMYQFIVEQAWVSGDRLLSQGQLIDTKIQLDLDSLKDYFSP HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCEEEEEEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA