Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079042

Identifier: 170079042

GI number: 170079042

Start: 2541556

End: 2543442

Strand: Reverse

Name: 170079042

Synonym: SYNPCC7002_A2447

Alternate gene names: NA

Gene position: 2543442-2541556 (Counterclockwise)

Preceding gene: 170079045

Following gene: 170079041

Centisome position: 84.55

GC content: 54.43

Gene sequence:

>1887_bases
ATGGAAACGACGGCGATCGCCAATGGGGATCCAGAGCAAGCAACGGCAGAGACAGAGACAGAAATCCTTGGGGTTCCGCG
TAAACGCCAATTTCTTCTCCCCAATTGGCAATGGTTAGGGTTGCTCTTAATTTTCCTATCGGGAGGCGTAGGCTTTTTGG
CGACATCGGTTCTCCTGAGTTTTAATGGCAGCAACAATTGCAGTGCCCTGTTCTTGCCTTTAGCCTCCGCCACAACCCGC
TTATACTGCGCCCAGATTGAGGCGGAGAAACAGACCCTTGCCAGCTACCTAAAGGCGATTCGGATGGTGAGTGGTTTTTC
GGAGAATCACCCCCTCCGGGCGGATATTGACCGCAACATTGAGGTGTGGGTTTCGCAAATTATTGCCCTTGCTGAGGTGG
AATTCCAGGCGGGAAAGTTGGATGAGGCGATCGCCATGGTGCGCGATATTCCCGAAAAGGCCGGTTTTCAAGCAGAAATT
GAGTCCCAAATCACGGCCTGGGAAGATATTTGGCAAGAGGGAGAAGCGATTCTAGCTAGCCTGCAACGGCAACTCGAAGC
AGGAGATTTAAGCCAGGCGATGCGGACAGTCGTCCAACTCAGTTATTTAGACAATCGCTACTGGGCTACGGTGAAGTACG
ATGAGGCCATGGCGCAAATTCAGTTGGCTCGCAAGGAAACGGAGCAGCTAGAAGGGGCCTATGCAGCCCTGCGTCGGGGC
GGTTTAGAAAATTGGCTCCAGGCGATCGCCCAGGCGAGCAACATTAGCCAAGATAGCTATGCTTACCCCCAAGCTCAACG
TTTAATTAGTGACGCCCGCGAAAAAATCATTGACTACACCGACAACATTATTGATGAACGCCGCTGGGATGACTTACTGG
CCCTCTGCGATCGCCTACCGGATCAACTGAACCTCGACAACGTGGTGGTCGATTGGCGAATTCTGGCCCAAGCTGGCCTC
AGGGCGAACCAAGGAACCGTTAAGGATCTCGAAACAGCCCTGGTGCAAATCCAAAGTATTCAGCCCGCCAGTGCTGTCTA
TGACCAGGCCCAAGGTCTGATTAGTCGTTGGCAACGGGAAATTGAGGACGTGGCGATCCTAGAACAGGCTGAGGAATTGG
CCCAGGGGGGAAATATCGCCGACTATGAACGGGCGATCGCCCAGCTCAACCGTGTTCCCTCAGGCAACCCCCGTTACGAT
GAAGCCCGCCAAAAAATTCGCCAATGGCGTCGCCAAATTGAAATCGCCGAAGACTCTCCCACCCTGGCCTATGCGAAAGA
TTTAGCAGCGACCAATCGTCTCCAGGAGGCGATCGCCGAAGCCCGCACGATCCAATCCGGTCGCGCCCTCTACAACGAAG
CCCAAGAAAATATTCGTCAGTGGCGCAACACCATTGAACGGACTGAAGATCAGCCGATCTTTGACCGAGCTGTGGCCCTC
GGCCAACAAAAACGCTTCGATGAGGCGATCGCCGTTGCTAACCAAATTGCCCCGAACCGTGTCCTTTATGACGAAATGCA
GGCTAGGGTCAGGAGTTGGCGTCAAGAACAAACCGCGATCAATAATCTCAATCGCGCCTACCAAGTGGCCAATGGTAACT
CCGTCTCTGCCTGGGTAGAAGCCATCAACCTTACCCAAGAAATTCCCAGCAGCGCTAGCCAACTGCGGGCCGAAGGAAAA
CAGGCCGCTGACCAATGGAGCTATCGGATCCTCTCTGTGGCCCAGAGCCAAGCCAATATCTCAATCCCCCAGGCGATCGC
CACCGCTCGCCAAATCCCCCGCAATACCGCTGCCTACGACGCCGCCCAAACCCAAATCAACACCTGGCAACGTCTCACCA
CCCCCAGCCCTAGTCCCCAAACCATCGACGTTCCGACAAACCTCTAA

Upstream 100 bases:

>100_bases
CTCGCAAGTGCAATCCGTTTCTTCCGTTGGCACCCAATCGCAGCCAGTGTTATCGACTGAAGCAGGTTTATCGGAAGCGT
CTGGGACGCAAGATTTAAGC

Downstream 100 bases:

>100_bases
TTTCCCCTTCTTCAGTTGCCCATGACCACCGAACACCCCCTTGGCTCCGTAATTCAAGGTTCCCTCAGCCAAGGCCTCGA
AGTCCGTCTCCATGGCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLSFNGSNNCSALFLPLASATTR
LYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNIEVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEI
ESQITAWEDIWQEGEAILASLQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG
GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLPDQLNLDNVVVDWRILAQAGL
RANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQREIEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYD
EARQKIRQWRRQIEIAEDSPTLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL
GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVEAINLTQEIPSSASQLRAEGK
QAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYDAAQTQINTWQRLTTPSPSPQTIDVPTNL

Sequences:

>Translated_628_residues
METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLSFNGSNNCSALFLPLASATTR
LYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNIEVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEI
ESQITAWEDIWQEGEAILASLQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG
GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLPDQLNLDNVVVDWRILAQAGL
RANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQREIEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYD
EARQKIRQWRRQIEIAEDSPTLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL
GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVEAINLTQEIPSSASQLRAEGK
QAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYDAAQTQINTWQRLTTPSPSPQTIDVPTNL
>Mature_628_residues
METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLSFNGSNNCSALFLPLASATTR
LYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNIEVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEI
ESQITAWEDIWQEGEAILASLQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG
GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLPDQLNLDNVVVDWRILAQAGL
RANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQREIEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYD
EARQKIRQWRRQIEIAEDSPTLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL
GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVEAINLTQEIPSSASQLRAEGK
QAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYDAAQTQINTWQRLTTPSPSPQTIDVPTNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70440; Mature: 70440

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLS
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
FNGSNNCSALFLPLASATTRLYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNI
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
EVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEIESQITAWEDIWQEGEAILAS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG
HHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLP
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DQLNLDNVVVDWRILAQAGLRANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQRE
CCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYDEARQKIRQWRRQIEIAEDSP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
TLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHH
AINLTQEIPSSASQLRAEGKQAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH
AAQTQINTWQRLTTPSPSPQTIDVPTNL
HHHHHHHHHHHHCCCCCCCCEECCCCCC
>Mature Secondary Structure
METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLS
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
FNGSNNCSALFLPLASATTRLYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNI
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
EVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEIESQITAWEDIWQEGEAILAS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG
HHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLP
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DQLNLDNVVVDWRILAQAGLRANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQRE
CCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYDEARQKIRQWRRQIEIAEDSP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
TLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHH
AINLTQEIPSSASQLRAEGKQAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH
AAQTQINTWQRLTTPSPSPQTIDVPTNL
HHHHHHHHHHHHCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA