Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078990

Identifier: 170078990

GI number: 170078990

Start: 2480358

End: 2480696

Strand: Reverse

Name: 170078990

Synonym: SYNPCC7002_A2395

Alternate gene names: NA

Gene position: 2480696-2480358 (Counterclockwise)

Preceding gene: 170079000

Following gene: 170078989

Centisome position: 82.47

GC content: 48.08

Gene sequence:

>339_bases
ATGGCTCAAATTCTTGATCCCATCCCAAATGATGACAACAAAGCTCTACTTTGCTGCTATGTAAATGCAACCAGTCAAAT
TCAAGTTGCGCGTATTACAAATGTTGAAGATTGGTATTTTGAGCGGGTTGTTTTTCCCGGGCAACGGCTAATATTTGAAG
CCCTCCCCCAGGCGATCTTAGAAATTCATACGGGGATGATGGCGAGTGCTATTTTATCGGACACGATCCCCTGCTATCGT
CTGGCAATGCAAGAAACTGGCTCGGAAACAGATGAACCAGAGCCGGCCCCGGTGAATCAAGATATTCCTGCGGCTAGACC
GGTGGCGATCGCCCCCTAA

Upstream 100 bases:

>100_bases
TATGTCTTTGTAGTAGACGTTACAACCATTGGGGATCAATCGGTGTTAGCTTATCATCGAGAGATATAAAAGACTATTTA
AATATTTACCCAGGAATCCC

Downstream 100 bases:

>100_bases
GTTTTTCCTTAAATTTTTGCCACGAGCCATCCTCCGGGGTGGTTTTATTTTGTCTTCCCCCATCGTTAAACCCCAAAGCC
AAAATGTAAGATAGAATACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAILEIHTGMMASAILSDTIPCYR
LAMQETGSETDEPEPAPVNQDIPAARPVAIAP

Sequences:

>Translated_112_residues
MAQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAILEIHTGMMASAILSDTIPCYR
LAMQETGSETDEPEPAPVNQDIPAARPVAIAP
>Mature_111_residues
AQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAILEIHTGMMASAILSDTIPCYRL
AMQETGSETDEPEPAPVNQDIPAARPVAIAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014964 [H]

Pfam domain/function: PF08865 DUF1830 [H]

EC number: NA

Molecular weight: Translated: 12355; Mature: 12224

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAIL
CCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHH
EIHTGMMASAILSDTIPCYRLAMQETGSETDEPEPAPVNQDIPAARPVAIAP
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
AQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAIL
CCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHH
EIHTGMMASAILSDTIPCYRLAMQETGSETDEPEPAPVNQDIPAARPVAIAP
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]