| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is cphA [H]
Identifier: 170079000
GI number: 170079000
Start: 2488692
End: 2491385
Strand: Reverse
Name: cphA [H]
Synonym: SYNPCC7002_A2405
Alternate gene names: 170079000
Gene position: 2491385-2488692 (Counterclockwise)
Preceding gene: 170079001
Following gene: 170078990
Centisome position: 82.82
GC content: 53.82
Gene sequence:
>2694_bases ATGAGAATCCTCAAGACCCTAACCCTCAGAGGCCCCAATTATTGGAGTATTCGACGCAAAAAGTTGATCGTCATGCGTCT CGATCTCGAAGAAATTGCGGAAATCCCCTCCAACGAAATTAGCGGATTCTACGAAGCCCTCAGCGAAACCCTCCCGAGTC TCGTCGAACACCACTGCTCCCCCGGTTGCCGGGGTGGTTTTTTAAGTCGTGTCCGGGAAGGCACCCTCATGGGTCACATC GTGGAACATGTCGCCCTCGAACTCCAAGAATTAGCGGGTATGCCCGTTGGGTTTGGTCGCACCCGGGTCACTGGCGATCA TGGTGTCTACAATGTCGTTTTTGAATATATTTATGAACAAGCCGGACGTTATGCTGGACGGGCCGCCGTACGCCTCTGTC AATCCATCCTTGATACTGGGCGCTATTCCCCCAAAGAACTAGAGCAGGATCTCGCCGATCTCAAAGATCTCTGTGCCAGC TCAGCCCTCGGCCCCAGTACCGAAACCATCGTCAAAGAGGCCGAATCCCGTGGGATTCCCTGGTCATTGCTCAGTGCCCG TTCCATGATTCAACTGGGCTATGGCCTACATCAGCGACGATTACAAGCCACCCTCAGCAACCAATCTGGCATTTTAGCCG TTGAATTAGCCTGTGACAAAGAAGGCACCAAAAATATCCTGGCCGATGCGGGTGTCCCCGTGCCCCGTGGTACCGTGATT CGCTATTTAGATGACCTTGAGGATGCCATTGAAGATGTCGGTGGCTATCCCATTGTGATTAAACCCCTCGATGGCAACCA TGGCCGTGGCATTACCATTGATATCAAAACCTGGGCCGACGCAGAACACGCCTACGATCTCGCCAGTGAAGCCTCAAAAA CCCGCTCCGTCATCGTAGAACGTTACTACAAAGGCAGTGACCACCGGGTATTGGTTATTAACGGTAAGCTCGTTGCTGTC TCCGAACGGGTACCAGCCCATGTGGTCGGGGATGGTCACTCAACCATTGAAACCCTCATCGAAGAAACAAACCGCGATCC AAATCGGGGCGACGGCCATGATAATGTCCTCACCCGCATCGTCATCGACCAAACAGCCCTAAAAGTGCTCGATCGCCAAG GCTTATCCCTGGACACCGTACTCCAGGACGGAGAAATTGCCTATTTGCGAGCCACGGCGAACCTCAGTACCGGGGGCATT GCCGTTGATCGTACCGATGATATCCACCCCTACAATGTGTGGCTCTTTGAGCGGGTGGCCAAAATTATTGGCTTGGATAT TGCCGGGATTGATGTGGTTACTGAAGACATTACTCAGCCTCTCCCCGATACCGATGGGGTGATTGTGGAGGTCAATGCGG CTCCTGGTTTTCGGATGCACGTGGCGCCAAGCCGTGGTTTACCCCGAAATGTGGCGGCCCCAGTACTGGATATGCTCTAT CCTGATGGTTCCCCCAGCCGGATCCCCATCATTGCCCTGACGGGAACCAATGGCAAAACTACCACTACCCGTTTAACGGC CCATATCTATCGCCAAACGGGAAAAGTCGTGGGCTATACCAGCACAGATGGGGTTTACATCGGTGACTATCTCGCCCAAA AGGGTGATAATACTGGCCCCCAAAGTGCGGCGATGATTCTCCAAGACCCAACGGTGGAAGTGGCCGTCCTGGAATCAGCC CGGGGCGGTATTTTACGGGCTGGTTTAGCCTTTGATCGCTGTGATGTAGGAGTCGTCCTCAATGTCGCAGCAGATCACCT AGGTCTAGGGGATATCAATACCATTGAGCAAATGGCCCAGGTCAAGGGCGTGATTGCTGAAACAGTTAGTCCCGATGGCT ATGCGGTTCTGAATGCGGATGATCCCCTCGTTGCCGCCATGGCCGAAAAGGTGCGGGGTAAGGTCACTTATTTTTCAATG CAGCCAGATAATCCCTTGGTTTTAGAGCACATACGACGGGGTGGACTGGCGGCGGTTTATGACAATGGTTATCTGACGTT GTTAGAAGGAGAATGGAAGCTACAGGTGGAGCATGTGAAGCACGCGCCGGTGACAATGGGGGGCATGGCTCCGTTTATGA TCGCCAATGCCCTCGCTGCTTGTTTGGCCGCCTTTGCCCAGGGCGTTGATATTGAACATATTCGCCAGGGGTTACGCACC TTTAAGCCTTCGGCAGCCCAGACCCCAGGACGGATGAACCTTTTTGATTTGGGAACGCACCACGCGCTGGTGGACTATGC CCATAATCCGGCGGGTTATGAGGCCGTTGGTGCCTTTGTGAAAAACTGGCCCGGCGAACGAATCGGGGTGGTGGGTGGCC CTGGCGATCGCCGCGATGAGGATTTAATTTTGTTGGGGCGCATTGCCGCTGCGGTTTTTGACCGAATTATCGTTAAAGAA GACGATGACAAACGGGGCCGCCACGCAGGGGAAGTGGCAGATTTAATCCGCCAGGGGATTCAAGAAGAAAATCCCAATTG CCAATACGAAACCATTCTTGATGAACAACGGGCCTTGAATGTTGCCCTCGATGAAGCGCCCCAGGAGGCTCTGGTGGTGA TTTTCCCCGAAAGTGTGACCAGGGCGATCGCCATGATTGAGCAGCGCCTACCTAGCCAAACTAACCCTGGCCTGAATGGG ACGGCGACTGTCTCTTCCGAAGCTCCGGTGAATTCTCCCTCCATCGCTAGCTAA
Upstream 100 bases:
>100_bases TGACAGGCCACTGCTGCGGATAGCATTGGTCTAACGCCGTTTATCGTCCACCCAGCGGCATTTGCGCCCAGCCCCACCAG ACTTTCAACCACGCCAACCT
Downstream 100 bases:
>100_bases GGGGTCGTTTGTCCGTAACTCACCTATTTTTCAAACAAAAAACGAGCATCCTACACCTGGAGATCAGAGGCGGGCGTTGC CCCCAGGGAAACTAAAGGAA
Product: cyanophycin synthetase
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 897; Mature: 897
Protein sequence:
>897_residues MRILKTLTLRGPNYWSIRRKKLIVMRLDLEEIAEIPSNEISGFYEALSETLPSLVEHHCSPGCRGGFLSRVREGTLMGHI VEHVALELQELAGMPVGFGRTRVTGDHGVYNVVFEYIYEQAGRYAGRAAVRLCQSILDTGRYSPKELEQDLADLKDLCAS SALGPSTETIVKEAESRGIPWSLLSARSMIQLGYGLHQRRLQATLSNQSGILAVELACDKEGTKNILADAGVPVPRGTVI RYLDDLEDAIEDVGGYPIVIKPLDGNHGRGITIDIKTWADAEHAYDLASEASKTRSVIVERYYKGSDHRVLVINGKLVAV SERVPAHVVGDGHSTIETLIEETNRDPNRGDGHDNVLTRIVIDQTALKVLDRQGLSLDTVLQDGEIAYLRATANLSTGGI AVDRTDDIHPYNVWLFERVAKIIGLDIAGIDVVTEDITQPLPDTDGVIVEVNAAPGFRMHVAPSRGLPRNVAAPVLDMLY PDGSPSRIPIIALTGTNGKTTTTRLTAHIYRQTGKVVGYTSTDGVYIGDYLAQKGDNTGPQSAAMILQDPTVEVAVLESA RGGILRAGLAFDRCDVGVVLNVAADHLGLGDINTIEQMAQVKGVIAETVSPDGYAVLNADDPLVAAMAEKVRGKVTYFSM QPDNPLVLEHIRRGGLAAVYDNGYLTLLEGEWKLQVEHVKHAPVTMGGMAPFMIANALAACLAAFAQGVDIEHIRQGLRT FKPSAAQTPGRMNLFDLGTHHALVDYAHNPAGYEAVGAFVKNWPGERIGVVGGPGDRRDEDLILLGRIAAAVFDRIIVKE DDDKRGRHAGEVADLIRQGIQEENPNCQYETILDEQRALNVALDEAPQEALVVIFPESVTRAIAMIEQRLPSQTNPGLNG TATVSSEAPVNSPSIAS
Sequences:
>Translated_897_residues MRILKTLTLRGPNYWSIRRKKLIVMRLDLEEIAEIPSNEISGFYEALSETLPSLVEHHCSPGCRGGFLSRVREGTLMGHI VEHVALELQELAGMPVGFGRTRVTGDHGVYNVVFEYIYEQAGRYAGRAAVRLCQSILDTGRYSPKELEQDLADLKDLCAS SALGPSTETIVKEAESRGIPWSLLSARSMIQLGYGLHQRRLQATLSNQSGILAVELACDKEGTKNILADAGVPVPRGTVI RYLDDLEDAIEDVGGYPIVIKPLDGNHGRGITIDIKTWADAEHAYDLASEASKTRSVIVERYYKGSDHRVLVINGKLVAV SERVPAHVVGDGHSTIETLIEETNRDPNRGDGHDNVLTRIVIDQTALKVLDRQGLSLDTVLQDGEIAYLRATANLSTGGI AVDRTDDIHPYNVWLFERVAKIIGLDIAGIDVVTEDITQPLPDTDGVIVEVNAAPGFRMHVAPSRGLPRNVAAPVLDMLY PDGSPSRIPIIALTGTNGKTTTTRLTAHIYRQTGKVVGYTSTDGVYIGDYLAQKGDNTGPQSAAMILQDPTVEVAVLESA RGGILRAGLAFDRCDVGVVLNVAADHLGLGDINTIEQMAQVKGVIAETVSPDGYAVLNADDPLVAAMAEKVRGKVTYFSM QPDNPLVLEHIRRGGLAAVYDNGYLTLLEGEWKLQVEHVKHAPVTMGGMAPFMIANALAACLAAFAQGVDIEHIRQGLRT FKPSAAQTPGRMNLFDLGTHHALVDYAHNPAGYEAVGAFVKNWPGERIGVVGGPGDRRDEDLILLGRIAAAVFDRIIVKE DDDKRGRHAGEVADLIRQGIQEENPNCQYETILDEQRALNVALDEAPQEALVVIFPESVTRAIAMIEQRLPSQTNPGLNG TATVSSEAPVNSPSIAS >Mature_897_residues MRILKTLTLRGPNYWSIRRKKLIVMRLDLEEIAEIPSNEISGFYEALSETLPSLVEHHCSPGCRGGFLSRVREGTLMGHI VEHVALELQELAGMPVGFGRTRVTGDHGVYNVVFEYIYEQAGRYAGRAAVRLCQSILDTGRYSPKELEQDLADLKDLCAS SALGPSTETIVKEAESRGIPWSLLSARSMIQLGYGLHQRRLQATLSNQSGILAVELACDKEGTKNILADAGVPVPRGTVI RYLDDLEDAIEDVGGYPIVIKPLDGNHGRGITIDIKTWADAEHAYDLASEASKTRSVIVERYYKGSDHRVLVINGKLVAV SERVPAHVVGDGHSTIETLIEETNRDPNRGDGHDNVLTRIVIDQTALKVLDRQGLSLDTVLQDGEIAYLRATANLSTGGI AVDRTDDIHPYNVWLFERVAKIIGLDIAGIDVVTEDITQPLPDTDGVIVEVNAAPGFRMHVAPSRGLPRNVAAPVLDMLY PDGSPSRIPIIALTGTNGKTTTTRLTAHIYRQTGKVVGYTSTDGVYIGDYLAQKGDNTGPQSAAMILQDPTVEVAVLESA RGGILRAGLAFDRCDVGVVLNVAADHLGLGDINTIEQMAQVKGVIAETVSPDGYAVLNADDPLVAAMAEKVRGKVTYFSM QPDNPLVLEHIRRGGLAAVYDNGYLTLLEGEWKLQVEHVKHAPVTMGGMAPFMIANALAACLAAFAQGVDIEHIRQGLRT FKPSAAQTPGRMNLFDLGTHHALVDYAHNPAGYEAVGAFVKNWPGERIGVVGGPGDRRDEDLILLGRIAAAVFDRIIVKE DDDKRGRHAGEVADLIRQGIQEENPNCQYETILDEQRALNVALDEAPQEALVVIFPESVTRAIAMIEQRLPSQTNPGLNG TATVSSEAPVNSPSIAS
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 97060; Mature: 97060
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILKTLTLRGPNYWSIRRKKLIVMRLDLEEIAEIPSNEISGFYEALSETLPSLVEHHCS CCCEEEEEECCCCEEEEECEEEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC PGCRGGFLSRVREGTLMGHIVEHVALELQELAGMPVGFGRTRVTGDHGVYNVVFEYIYEQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHH AGRYAGRAAVRLCQSILDTGRYSPKELEQDLADLKDLCASSALGPSTETIVKEAESRGIP HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC WSLLSARSMIQLGYGLHQRRLQATLSNQSGILAVELACDKEGTKNILADAGVPVPRGTVI HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCCHHH RYLDDLEDAIEDVGGYPIVIKPLDGNHGRGITIDIKTWADAEHAYDLASEASKTRSVIVE HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH RYYKGSDHRVLVINGKLVAVSERVPAHVVGDGHSTIETLIEETNRDPNRGDGHDNVLTRI HHHCCCCCEEEEEECEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH VIDQTALKVLDRQGLSLDTVLQDGEIAYLRATANLSTGGIAVDRTDDIHPYNVWLFERVA HHHHHHHHHHHHCCCCHHHEECCCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHH KIIGLDIAGIDVVTEDITQPLPDTDGVIVEVNAAPGFRMHVAPSRGLPRNVAAPVLDMLY HHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHC PDGSPSRIPIIALTGTNGKTTTTRLTAHIYRQTGKVVGYTSTDGVYIGDYLAQKGDNTGP CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHCCCCCCC QSAAMILQDPTVEVAVLESARGGILRAGLAFDRCDVGVVLNVAADHLGLGDINTIEQMAQ CCEEEEEECCCEEEEEEECCCCCEEEECCEECCCCCCEEEEEHHHHCCCCCHHHHHHHHH VKGVIAETVSPDGYAVLNADDPLVAAMAEKVRGKVTYFSMQPDNPLVLEHIRRGGLAAVY HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCEEEEE DNGYLTLLEGEWKLQVEHVKHAPVTMGGMAPFMIANALAACLAAFAQGVDIEHIRQGLRT ECCEEEEEECCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FKPSAAQTPGRMNLFDLGTHHALVDYAHNPAGYEAVGAFVKNWPGERIGVVGGPGDRRDE CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCC DLILLGRIAAAVFDRIIVKEDDDKRGRHAGEVADLIRQGIQEENPNCQYETILDEQRALN CEEEHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH VALDEAPQEALVVIFPESVTRAIAMIEQRLPSQTNPGLNGTATVSSEAPVNSPSIAS HHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MRILKTLTLRGPNYWSIRRKKLIVMRLDLEEIAEIPSNEISGFYEALSETLPSLVEHHCS CCCEEEEEECCCCEEEEECEEEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC PGCRGGFLSRVREGTLMGHIVEHVALELQELAGMPVGFGRTRVTGDHGVYNVVFEYIYEQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHH AGRYAGRAAVRLCQSILDTGRYSPKELEQDLADLKDLCASSALGPSTETIVKEAESRGIP HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC WSLLSARSMIQLGYGLHQRRLQATLSNQSGILAVELACDKEGTKNILADAGVPVPRGTVI HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCCHHH RYLDDLEDAIEDVGGYPIVIKPLDGNHGRGITIDIKTWADAEHAYDLASEASKTRSVIVE HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH RYYKGSDHRVLVINGKLVAVSERVPAHVVGDGHSTIETLIEETNRDPNRGDGHDNVLTRI HHHCCCCCEEEEEECEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH VIDQTALKVLDRQGLSLDTVLQDGEIAYLRATANLSTGGIAVDRTDDIHPYNVWLFERVA HHHHHHHHHHHHCCCCHHHEECCCCEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHH KIIGLDIAGIDVVTEDITQPLPDTDGVIVEVNAAPGFRMHVAPSRGLPRNVAAPVLDMLY HHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHC PDGSPSRIPIIALTGTNGKTTTTRLTAHIYRQTGKVVGYTSTDGVYIGDYLAQKGDNTGP CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHCCCCCCC QSAAMILQDPTVEVAVLESARGGILRAGLAFDRCDVGVVLNVAADHLGLGDINTIEQMAQ CCEEEEEECCCEEEEEEECCCCCEEEECCEECCCCCCEEEEEHHHHCCCCCHHHHHHHHH VKGVIAETVSPDGYAVLNADDPLVAAMAEKVRGKVTYFSMQPDNPLVLEHIRRGGLAAVY HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCCEEEEE DNGYLTLLEGEWKLQVEHVKHAPVTMGGMAPFMIANALAACLAAFAQGVDIEHIRQGLRT ECCEEEEEECCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FKPSAAQTPGRMNLFDLGTHHALVDYAHNPAGYEAVGAFVKNWPGERIGVVGGPGDRRDE CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCC DLILLGRIAAAVFDRIIVKEDDDKRGRHAGEVADLIRQGIQEENPNCQYETILDEQRALN CEEEHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH VALDEAPQEALVVIFPESVTRAIAMIEQRLPSQTNPGLNGTATVSSEAPVNSPSIAS HHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA