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The map label for this gene is yciR [C]

Identifier: 170078959

GI number: 170078959

Start: 2445446

End: 2447254

Strand: Reverse

Name: yciR [C]

Synonym: SYNPCC7002_A2364

Alternate gene names: 170078959

Gene position: 2447254-2445446 (Counterclockwise)

Preceding gene: 170078960

Following gene: 170078958

Centisome position: 81.36

GC content: 47.82

Gene sequence:

>1809_bases
ATGGTTGCCTCCTCACTTTCCCCCACCATTCTCGTCATTGAAGACGAAGATTCGATCCGAGAGCTCATCGTCACCTTGCT
CATCGCCGAAGATTATCAGGTTCTAGAAGCAGAAAATGGGCAGATTGGCGTCGGCATTGCCATTGAAAATCGTCCAGATC
TAATTATTTGTGACATCATGATGCCGGGCATGGACGGTTATGGTGTCTTAGAAATTCTCCAAGCAGATCCAGAAACCGAA
ACGATTCCATTCATTTTTTTAACGGCCAAAGGTACGAAAGAAAATATTCGCCAAGGGATGAACTTGGGGGCCGATGATTA
CCTCACAAAGCCCTTTACCACCTACGAGTTACTTGACGCCATTAAAACACGTTTGCGGAAACATCGCTCCTGGCAGGGGT
ATTTTCAGCAAAAGAAACAGGCTGGCGATCGCCAACAAATCAACTACGCCGTTACCCACGATCCCATTACCCAGCTTCCC
AATCAACTCGCCCTCCGGGATGACCTCAACCGCCTCCTAAAACAGTGGGAACCGTTCGTTCAGCAGCAACTCCAACCCCA
TGAGTCGTGGCAGATTCCCATTTTCTATCTGAGCGTTGATCGCTTTGAAAAAATCAACGAATTATTTGGCTATCAATTTG
GTAATGCTGTCCTCAAGCATATCGTGCGCCAGTTGGTGACGGTGGTGGCCGAGGAGGCCTATTTAGCCTGTTTAAATTAC
ACAGATTTTGTGGTGATTTATCCCCCCAATTGTGCGGTGCATGAGGCCGAACTCAATCAAATGGCAGAGCAGATCCTAGA
AGCCTTTGGCAGCCCCCTGACGGTCAATGGACAAAAGATCTTGATCAATTGGTACATCGGGATGATTACCATGCCCTACC
GGGAATACAACTTCGATAAGTATCTCAACCAAGCAAAAGAGGCGATGGAGACGGCGCGGCAACGGGGCAGCACGAACTAT
TATTTCCATTTCCAAGAAGCGCAAATTAATGCCAATCACCAAAATCTACTGCTTGATGCGGATCTCTACGACGCGATCCA
AAACAATCAACTGACCCTGTATTACCAACCTAAAATTAGTACGACGACGGGCAAAATTGTTGGTGCAGAAGCGCTCATTC
GCTGGTTTCATCCCACCTTAGGTATGGTCTCACCGGCGAAGTTTATTCCCCTTGCTGAAAAAAATGGTTTGATCGCCAGC
ATTGGAGAATGGGTGTTTCGGGCTGCTTGTCACCAGGCTCAACAATGGATGCAAAGGGGCATGAGCGATCTTAGGATCGC
TGTTAATCTTTCTGGACGGCAATTTTATCAAGCTCAACTGGTGGAAAATCTGGTCGAAATTACCCAGCAGTATGGGATTA
ATCCGGCTCAAATCGAACTGGAAGTGACCGAAAGTATTTTGATCTCGGATGTGGAGTTGGCGATCGCCCATCTGCAAGCC
CTAAAAAACTCCGGTTTTCCCATTGCCATTGATGATTTTGGGACAGGCTACTCCTCCCTGAGTTATCTCCAAAATTTCCC
CTTCGATATCCTTAAAATAGACCGCTGCTTTGTCCGCAACGTCGCCCACAACATTACCAACTCCACCATCGTCAAACACA
TCATCATGATGGCGAAACAACTCGAACTGACCACCGTTGCTGAGGGGGTCGAAACCATGGCCGAATTAGAATTCCTCAAG
ACGCAACATTGTGACGAGATCCAGGGGTTTTTGTTTAGTCCGCCGGTGCCCGCCGAAAAATTTACAGCCATGCTCCAGGC
CGACCAAAATTTTTACGAACCATGCCCAATCTCCCCTAATCCCGCCTAG

Upstream 100 bases:

>100_bases
AAGTCTCGTGAATTCTGGCACCACATTCCGCGTTAAAATTCCCTGCTCTTTCGTGAGTAAACCCTGACTGACGCATCAAG
TCCCATGAGAAACATCTACT

Downstream 100 bases:

>100_bases
CTTCCGACCCTGACGCTACGAAAGAACCGGAGTACGATAGGATTAAGCCTATTCTAATCTTTTTTCGTATACAGACATTT
ATTAACAATGACTGCAGAGC

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MVASSLSPTILVIEDEDSIRELIVTLLIAEDYQVLEAENGQIGVGIAIENRPDLIICDIMMPGMDGYGVLEILQADPETE
TIPFIFLTAKGTKENIRQGMNLGADDYLTKPFTTYELLDAIKTRLRKHRSWQGYFQQKKQAGDRQQINYAVTHDPITQLP
NQLALRDDLNRLLKQWEPFVQQQLQPHESWQIPIFYLSVDRFEKINELFGYQFGNAVLKHIVRQLVTVVAEEAYLACLNY
TDFVVIYPPNCAVHEAELNQMAEQILEAFGSPLTVNGQKILINWYIGMITMPYREYNFDKYLNQAKEAMETARQRGSTNY
YFHFQEAQINANHQNLLLDADLYDAIQNNQLTLYYQPKISTTTGKIVGAEALIRWFHPTLGMVSPAKFIPLAEKNGLIAS
IGEWVFRAACHQAQQWMQRGMSDLRIAVNLSGRQFYQAQLVENLVEITQQYGINPAQIELEVTESILISDVELAIAHLQA
LKNSGFPIAIDDFGTGYSSLSYLQNFPFDILKIDRCFVRNVAHNITNSTIVKHIIMMAKQLELTTVAEGVETMAELEFLK
TQHCDEIQGFLFSPPVPAEKFTAMLQADQNFYEPCPISPNPA

Sequences:

>Translated_602_residues
MVASSLSPTILVIEDEDSIRELIVTLLIAEDYQVLEAENGQIGVGIAIENRPDLIICDIMMPGMDGYGVLEILQADPETE
TIPFIFLTAKGTKENIRQGMNLGADDYLTKPFTTYELLDAIKTRLRKHRSWQGYFQQKKQAGDRQQINYAVTHDPITQLP
NQLALRDDLNRLLKQWEPFVQQQLQPHESWQIPIFYLSVDRFEKINELFGYQFGNAVLKHIVRQLVTVVAEEAYLACLNY
TDFVVIYPPNCAVHEAELNQMAEQILEAFGSPLTVNGQKILINWYIGMITMPYREYNFDKYLNQAKEAMETARQRGSTNY
YFHFQEAQINANHQNLLLDADLYDAIQNNQLTLYYQPKISTTTGKIVGAEALIRWFHPTLGMVSPAKFIPLAEKNGLIAS
IGEWVFRAACHQAQQWMQRGMSDLRIAVNLSGRQFYQAQLVENLVEITQQYGINPAQIELEVTESILISDVELAIAHLQA
LKNSGFPIAIDDFGTGYSSLSYLQNFPFDILKIDRCFVRNVAHNITNSTIVKHIIMMAKQLELTTVAEGVETMAELEFLK
TQHCDEIQGFLFSPPVPAEKFTAMLQADQNFYEPCPISPNPA
>Mature_602_residues
MVASSLSPTILVIEDEDSIRELIVTLLIAEDYQVLEAENGQIGVGIAIENRPDLIICDIMMPGMDGYGVLEILQADPETE
TIPFIFLTAKGTKENIRQGMNLGADDYLTKPFTTYELLDAIKTRLRKHRSWQGYFQQKKQAGDRQQINYAVTHDPITQLP
NQLALRDDLNRLLKQWEPFVQQQLQPHESWQIPIFYLSVDRFEKINELFGYQFGNAVLKHIVRQLVTVVAEEAYLACLNY
TDFVVIYPPNCAVHEAELNQMAEQILEAFGSPLTVNGQKILINWYIGMITMPYREYNFDKYLNQAKEAMETARQRGSTNY
YFHFQEAQINANHQNLLLDADLYDAIQNNQLTLYYQPKISTTTGKIVGAEALIRWFHPTLGMVSPAKFIPLAEKNGLIAS
IGEWVFRAACHQAQQWMQRGMSDLRIAVNLSGRQFYQAQLVENLVEITQQYGINPAQIELEVTESILISDVELAIAHLQA
LKNSGFPIAIDDFGTGYSSLSYLQNFPFDILKIDRCFVRNVAHNITNSTIVKHIIMMAKQLELTTVAEGVETMAELEFLK
TQHCDEIQGFLFSPPVPAEKFTAMLQADQNFYEPCPISPNPA

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1787541, Length=445, Percent_Identity=31.685393258427, Blast_Score=242, Evalue=4e-65,
Organism=Escherichia coli, GI87081921, Length=449, Percent_Identity=31.8485523385301, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI226510982, Length=368, Percent_Identity=33.4239130434783, Blast_Score=199, Evalue=5e-52,
Organism=Escherichia coli, GI1790496, Length=245, Percent_Identity=37.5510204081633, Blast_Score=172, Evalue=5e-44,
Organism=Escherichia coli, GI87081743, Length=240, Percent_Identity=38.75, Blast_Score=161, Evalue=1e-40,
Organism=Escherichia coli, GI1786507, Length=256, Percent_Identity=32.421875, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI87081845, Length=235, Percent_Identity=34.468085106383, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1788502, Length=246, Percent_Identity=30.4878048780488, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI87081980, Length=248, Percent_Identity=31.4516129032258, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787055, Length=368, Percent_Identity=27.1739130434783, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788849, Length=239, Percent_Identity=35.1464435146443, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI87082096, Length=252, Percent_Identity=30.1587301587302, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1786599, Length=122, Percent_Identity=40.1639344262295, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI87082012, Length=148, Percent_Identity=33.1081081081081, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1786784, Length=118, Percent_Identity=38.9830508474576, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1786911, Length=119, Percent_Identity=36.1344537815126, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788394, Length=135, Percent_Identity=31.1111111111111, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1789809, Length=119, Percent_Identity=32.7731092436975, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=34.2592592592593, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790860, Length=120, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790863, Length=111, Percent_Identity=36.036036036036, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787410, Length=119, Percent_Identity=34.453781512605, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 68467; Mature: 68467

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVASSLSPTILVIEDEDSIRELIVTLLIAEDYQVLEAENGQIGVGIAIENRPDLIICDIM
CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEECCCCCEEEEEEE
MPGMDGYGVLEILQADPETETIPFIFLTAKGTKENIRQGMNLGADDYLTKPFTTYELLDA
CCCCCCCCHHHHEECCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHCCCCCHHHHHHHH
IKTRLRKHRSWQGYFQQKKQAGDRQQINYAVTHDPITQLPNQLALRDDLNRLLKQWEPFV
HHHHHHHCCCHHHHHHHHHHCCCHHHCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHH
QQQLQPHESWQIPIFYLSVDRFEKINELFGYQFGNAVLKHIVRQLVTVVAEEAYLACLNY
HHHCCCCCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC
TDFVVIYPPNCAVHEAELNQMAEQILEAFGSPLTVNGQKILINWYIGMITMPYREYNFDK
CCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEHEECCHHHCCHHH
YLNQAKEAMETARQRGSTNYYFHFQEAQINANHQNLLLDADLYDAIQNNQLTLYYQPKIS
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEECHHHHHHCCCCEEEEECCCCC
TTTGKIVGAEALIRWFHPTLGMVSPAKFIPLAEKNGLIASIGEWVFRAACHQAQQWMQRG
CCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
MSDLRIAVNLSGRQFYQAQLVENLVEITQQYGINPAQIELEVTESILISDVELAIAHLQA
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEHHHHHHHHHHHHHHHHHH
LKNSGFPIAIDDFGTGYSSLSYLQNFPFDILKIDRCFVRNVAHNITNSTIVKHIIMMAKQ
HHCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LELTTVAEGVETMAELEFLKTQHCDEIQGFLFSPPVPAEKFTAMLQADQNFYEPCPISPN
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PA
CC
>Mature Secondary Structure
MVASSLSPTILVIEDEDSIRELIVTLLIAEDYQVLEAENGQIGVGIAIENRPDLIICDIM
CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEECCCCCEEEEEEE
MPGMDGYGVLEILQADPETETIPFIFLTAKGTKENIRQGMNLGADDYLTKPFTTYELLDA
CCCCCCCCHHHHEECCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHCCCCCHHHHHHHH
IKTRLRKHRSWQGYFQQKKQAGDRQQINYAVTHDPITQLPNQLALRDDLNRLLKQWEPFV
HHHHHHHCCCHHHHHHHHHHCCCHHHCCEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHH
QQQLQPHESWQIPIFYLSVDRFEKINELFGYQFGNAVLKHIVRQLVTVVAEEAYLACLNY
HHHCCCCCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC
TDFVVIYPPNCAVHEAELNQMAEQILEAFGSPLTVNGQKILINWYIGMITMPYREYNFDK
CCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEEEHEECCHHHCCHHH
YLNQAKEAMETARQRGSTNYYFHFQEAQINANHQNLLLDADLYDAIQNNQLTLYYQPKIS
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEECHHHHHHCCCCEEEEECCCCC
TTTGKIVGAEALIRWFHPTLGMVSPAKFIPLAEKNGLIASIGEWVFRAACHQAQQWMQRG
CCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
MSDLRIAVNLSGRQFYQAQLVENLVEITQQYGINPAQIELEVTESILISDVELAIAHLQA
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEHHHHHHHHHHHHHHHHHH
LKNSGFPIAIDDFGTGYSSLSYLQNFPFDILKIDRCFVRNVAHNITNSTIVKHIIMMAKQ
HHCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LELTTVAEGVETMAELEFLKTQHCDEIQGFLFSPPVPAEKFTAMLQADQNFYEPCPISPN
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]