Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is bvgS [H]

Identifier: 170078960

GI number: 170078960

Start: 2447288

End: 2448406

Strand: Reverse

Name: bvgS [H]

Synonym: SYNPCC7002_A2365

Alternate gene names: 170078960

Gene position: 2448406-2447288 (Counterclockwise)

Preceding gene: 170078962

Following gene: 170078959

Centisome position: 81.4

GC content: 49.87

Gene sequence:

>1119_bases
ATGCAATATAATCCTGCTCTAATTCAAGCCCTTGGCGACATCGTCTATGAACGCTGTTTAACCTCAGGTGCAATGGTGTG
GTACGGGGATTTTACGCGGGTTTTGGGGTATTCGGCGGCGGAAATGGGTAATGATTGTCAAACTTGGCTAGAGCGGCTCT
ATCCGGACGATCAAACGAAAGTTTTGGCCACCCTCGAACAAGCCTTCGCCCAACAGCAAGCCTACGAGTTGGACTATCGA
TTCCAGCACCATGACGGTTCCTATGTTTGGATCCAAGACCGGGGAGTTCCTAAGGATATTACTGCGCAAGATTCGGATCA
GTTTTGGGTGATTGGGGTGATGCGTGACATTAGCGATCGCAAACAGGTAGAGCTAGATATGCACAATGCCCTGATGCGCG
AAAAAGAACTCAATCAACTGAAAACCCGTTTCATTGACATTGCCTCCCATGAATTCCGCACCCCTTTGACCTCGATTTTG
GGCTTTACTGAACTCCTCGAACAATACGCCCACAAATTCAACCCAGAAGCGCAACGGCGGCATCTACAGCGAATTAAAGG
GGCGGCCCAACGGCTCCAAACCCTCGTTGACGATGTCCTTTCGGTCAGTCGCGTCGATGCAGGACAACTCACCCTAGAGC
CAGCGCCCGTGCATTTTGAAGGGCTGTGCCAGGACATCATCGAAGAGTTGCAAGTGGTGTTTGGCCATACCCACCCGATC
CGGTTTGATTTCGTTCCCCAATACCAAGGCGATCGCCGCCTCTTACCCGTCCTAGACGCCAAGATTATCCGCCACATTCT
GTCTAATTTACTCTCGAATGCCCTCAAATACTCTTTTCCCGGTGAAGCCGTCAGCCTAGTAGTTTGTTGTGGCGATCGCC
AAATCAGCATCACCATCACTGACCGGGGAATTGGCATTCCCCAAGCCGATTTACCACATTTATTTGAACCCTTTCACCGG
GCTCAAAATGTTGGCAAAATTCCAGGCACAGGCTTAGGACTACACATTGTGAAACGTTACATTGACTTACACAATGGTAC
GATTATGGTCGCAAGTCTCGTGAATTCTGGCACCACATTCCGCGTTAAAATTCCCTGCTCTTTCGTGAGTAAACCCTGA

Upstream 100 bases:

>100_bases
CAAACTTTTCAAATTGATTGCCGTTTAAGGGTCAGCAATTTCCCATCATTTCTCGTCTGATTTTCCTTTTTTTTTCTGTG
CGTCTTATCTCACCCTGCCC

Downstream 100 bases:

>100_bases
CTGACGCATCAAGTCCCATGAGAAACATCTACTATGGTTGCCTCCTCACTTTCCCCCACCATTCTCGTCATTGAAGACGA
AGATTCGATCCGAGAGCTCA

Product: two-component hybrid sensor kinase/response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTKVLATLEQAFAQQQAYELDYR
FQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDRKQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSIL
GFTELLEQYAHKFNPEAQRRHLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI
RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITITDRGIGIPQADLPHLFEPFHR
AQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTFRVKIPCSFVSKP

Sequences:

>Translated_372_residues
MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTKVLATLEQAFAQQQAYELDYR
FQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDRKQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSIL
GFTELLEQYAHKFNPEAQRRHLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI
RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITITDRGIGIPQADLPHLFEPFHR
AQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTFRVKIPCSFVSKP
>Mature_372_residues
MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTKVLATLEQAFAQQQAYELDYR
FQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDRKQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSIL
GFTELLEQYAHKFNPEAQRRHLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI
RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITITDRGIGIPQADLPHLFEPFHR
AQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTFRVKIPCSFVSKP

Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=323, Percent_Identity=28.1733746130031, Blast_Score=111, Evalue=9e-26,
Organism=Escherichia coli, GI1789149, Length=247, Percent_Identity=32.3886639676113, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI145693157, Length=260, Percent_Identity=30, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788713, Length=271, Percent_Identity=29.8892988929889, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI87081816, Length=260, Percent_Identity=30, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=26.7241379310345, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788393, Length=246, Percent_Identity=28.8617886178862, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786600, Length=238, Percent_Identity=25.2100840336134, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786783, Length=263, Percent_Identity=28.1368821292776, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87082128, Length=238, Percent_Identity=26.4705882352941, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1788549, Length=259, Percent_Identity=27.4131274131274, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=28.3898305084746, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790861, Length=294, Percent_Identity=22.108843537415, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR001638
- InterPro:   IPR004358
- InterPro:   IPR008207
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 42259; Mature: 42259

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTK
CCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHCCCHHHHHHHHHCCCCHHH
VLATLEQAFAQQQAYELDYRFQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDR
HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHCCCCH
KQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSILGFTELLEQYAHKFNPEAQRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH
HLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCE
RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITIT
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEE
DRGIGIPQADLPHLFEPFHRAQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTF
ECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCEE
RVKIPCSFVSKP
EEEECHHCCCCC
>Mature Secondary Structure
MQYNPALIQALGDIVYERCLTSGAMVWYGDFTRVLGYSAAEMGNDCQTWLERLYPDDQTK
CCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCHHHHCCCHHHHHHHHHCCCCHHH
VLATLEQAFAQQQAYELDYRFQHHDGSYVWIQDRGVPKDITAQDSDQFWVIGVMRDISDR
HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEHHCCCCH
KQVELDMHNALMREKELNQLKTRFIDIASHEFRTPLTSILGFTELLEQYAHKFNPEAQRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH
HLQRIKGAAQRLQTLVDDVLSVSRVDAGQLTLEPAPVHFEGLCQDIIEELQVVFGHTHPI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCE
RFDFVPQYQGDRRLLPVLDAKIIRHILSNLLSNALKYSFPGEAVSLVVCCGDRQISITIT
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEE
DRGIGIPQADLPHLFEPFHRAQNVGKIPGTGLGLHIVKRYIDLHNGTIMVASLVNSGTTF
ECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHCCCCEE
RVKIPCSFVSKP
EEEECHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1791760; 12910271 [H]