| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078947
Identifier: 170078947
GI number: 170078947
Start: 2430554
End: 2432035
Strand: Direct
Name: 170078947
Synonym: SYNPCC7002_A2352
Alternate gene names: NA
Gene position: 2430554-2432035 (Clockwise)
Preceding gene: 170078945
Following gene: 170078950
Centisome position: 80.8
GC content: 51.01
Gene sequence:
>1482_bases ATGAACTTAAATAGTGGTGTGAAAAGCTTAGTGGCATCAATGGTGAAGCCCAAGCTAAAAGCTAGTTTCAAGTTAGCTCT CTTATCGACTCTTGCCGGCCTTCCATTGGGCACGCTAATCTTTCCGCCCCAAGCGATCGCCCAAAACGCAACTATTCGAG GTGAAGTTGTTTTCACATTAACGGATCTCGCCGGCGCAGAAATGCTCGCTGTCACAAAAGATGGTCGCCACGCCCTTGTG GTCGGCGCAAAAACAGCGACCTTAGTGGCGATCGAAGATAATGCCTTAACCGTCGAAGGGACTTGGACCCTAACGGATGA ATTTTTGCCCGCAGGTTCTGCGGACGCTGAACTCACTGGAGTTTCCATTAGCCCAGACGGGGCCTTCGCACTCATCGGGG TCAAAGACGCAGATGACGCAAATCTGGATACCTTTGACGAAATGCCAGGCAAGGTCGTGGCCCTCTCTCTCCCCGATCTA GAACCCCTTGGGCACGTAACTGTAGGTCGCGGCCCAGACTCCGTGGCGATCGCCCCGAATGGTCAGTTTGCTGCCGTCGC CAATGAAGATGAAGAAAACGAAGAAGATCTGACGAACCTAGAAAACGGCGCTGGAACCGTTTCGATCATTGATCTCCGAC GTGGCCCCAATCGCATGACCCAGGTCGAGGTGCCCATTCCCCCCGACAATATTCCCTTTTTCCCCCACGACCCACAGCCT GAGACGGTTCGCATCGCGGCTGATAGCTCTTTTATTGTCGCCACACTACAAGAAAATAATGCTGTCGCTCGCATTGAAAT TCCCTCTCCTTTGCCCAAACGTCTAACCCCTGATATCTTTTCGGTGCAAAACTTTGATGTCGGCGTTCGTACGGGTTTCG GTTTAGTTCAAGATAAAGTTGGAGAAGGAAGCTGTCGTTCTGGCAGCTATGACCTATCCCTCAGACAAGAATTCACCTCT GCCCGTGAACCCGATGGCATTGCCATTACCCCAGATGGTCGCTACTTTGTCACCGCCGATGAAGATAATTTGACCAATGT CAATAACCAGTCCTACGAAGGAATTCTCTTAAGTCCCCATGGTACCCGCAGTATTAGTGTCTTTGACGCAACCACGGGTG AACTTTTGGGAGATAGCGGCAATTCCATCGAAGAAAGCATCATCGCCCTCGGCTTGCCCCAGCGCTGTAACAGCAAAGGC CCAGAACCTGAGGTTGTTTCCGTTGGTGTTGTAAATGGTCGTACCCTAGCATTCGTGGCGATCGAGCGTTCAGATGCGAT CACAATCCATGACATTTCCAACCCTAGAAATGTTCAGCTGCTCGATACTGTCGTTCTCAACCCTGATGTTGTTCGGGCCA ATCAAGAGGCTGGGTTTGAGCCAGAAGGGATTGAATTTATTCCTGCAACGAATCAAGTGATTGTCTCCAACCCAGAAGGC AACGCCATGAGCTTGGTAAACATCAATGTGATGCCACGCTAG
Upstream 100 bases:
>100_bases AAATCTAAAATTAAACTTTGCTTAGTTTCTTTTTAACTCAAGCAATTCTCTTTCCATTGTATCGTTGGGGTCGTGGTATT AATCAAATAAATATTAGGTA
Downstream 100 bases:
>100_bases GCTTTTTCTTGCGTTGAGTTGACATAAATAAATATTTAGAAACTCAAGACCCTGTGTTAGCTTCTAAGCCTCTAACACAG GGTTTGTTGATGAAGATGAA
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline Phosphatase; Endonuclease/Exonuclease/Phosphatase
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MNLNSGVKSLVASMVKPKLKASFKLALLSTLAGLPLGTLIFPPQAIAQNATIRGEVVFTLTDLAGAEMLAVTKDGRHALV VGAKTATLVAIEDNALTVEGTWTLTDEFLPAGSADAELTGVSISPDGAFALIGVKDADDANLDTFDEMPGKVVALSLPDL EPLGHVTVGRGPDSVAIAPNGQFAAVANEDEENEEDLTNLENGAGTVSIIDLRRGPNRMTQVEVPIPPDNIPFFPHDPQP ETVRIAADSSFIVATLQENNAVARIEIPSPLPKRLTPDIFSVQNFDVGVRTGFGLVQDKVGEGSCRSGSYDLSLRQEFTS AREPDGIAITPDGRYFVTADEDNLTNVNNQSYEGILLSPHGTRSISVFDATTGELLGDSGNSIEESIIALGLPQRCNSKG PEPEVVSVGVVNGRTLAFVAIERSDAITIHDISNPRNVQLLDTVVLNPDVVRANQEAGFEPEGIEFIPATNQVIVSNPEG NAMSLVNINVMPR
Sequences:
>Translated_493_residues MNLNSGVKSLVASMVKPKLKASFKLALLSTLAGLPLGTLIFPPQAIAQNATIRGEVVFTLTDLAGAEMLAVTKDGRHALV VGAKTATLVAIEDNALTVEGTWTLTDEFLPAGSADAELTGVSISPDGAFALIGVKDADDANLDTFDEMPGKVVALSLPDL EPLGHVTVGRGPDSVAIAPNGQFAAVANEDEENEEDLTNLENGAGTVSIIDLRRGPNRMTQVEVPIPPDNIPFFPHDPQP ETVRIAADSSFIVATLQENNAVARIEIPSPLPKRLTPDIFSVQNFDVGVRTGFGLVQDKVGEGSCRSGSYDLSLRQEFTS AREPDGIAITPDGRYFVTADEDNLTNVNNQSYEGILLSPHGTRSISVFDATTGELLGDSGNSIEESIIALGLPQRCNSKG PEPEVVSVGVVNGRTLAFVAIERSDAITIHDISNPRNVQLLDTVVLNPDVVRANQEAGFEPEGIEFIPATNQVIVSNPEG NAMSLVNINVMPR >Mature_493_residues MNLNSGVKSLVASMVKPKLKASFKLALLSTLAGLPLGTLIFPPQAIAQNATIRGEVVFTLTDLAGAEMLAVTKDGRHALV VGAKTATLVAIEDNALTVEGTWTLTDEFLPAGSADAELTGVSISPDGAFALIGVKDADDANLDTFDEMPGKVVALSLPDL EPLGHVTVGRGPDSVAIAPNGQFAAVANEDEENEEDLTNLENGAGTVSIIDLRRGPNRMTQVEVPIPPDNIPFFPHDPQP ETVRIAADSSFIVATLQENNAVARIEIPSPLPKRLTPDIFSVQNFDVGVRTGFGLVQDKVGEGSCRSGSYDLSLRQEFTS AREPDGIAITPDGRYFVTADEDNLTNVNNQSYEGILLSPHGTRSISVFDATTGELLGDSGNSIEESIIALGLPQRCNSKG PEPEVVSVGVVNGRTLAFVAIERSDAITIHDISNPRNVQLLDTVVLNPDVVRANQEAGFEPEGIEFIPATNQVIVSNPEG NAMSLVNINVMPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52171; Mature: 52171
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNSGVKSLVASMVKPKLKASFKLALLSTLAGLPLGTLIFPPQAIAQNATIRGEVVFTL CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCEEEEEEEEEE TDLAGAEMLAVTKDGRHALVVGAKTATLVAIEDNALTVEGTWTLTDEFLPAGSADAELTG ECCCCCEEEEEECCCCEEEEEECCEEEEEEEECCEEEEEEEEEEEHHHCCCCCCCCEEEE VSISPDGAFALIGVKDADDANLDTFDEMPGKVVALSLPDLEPLGHVTVGRGPDSVAIAPN EEECCCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCCCCCCEEECCCCCEEEECCC GQFAAVANEDEENEEDLTNLENGAGTVSIIDLRRGPNRMTQVEVPIPPDNIPFFPHDPQP CCEEEEECCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC ETVRIAADSSFIVATLQENNAVARIEIPSPLPKRLTPDIFSVQNFDVGVRTGFGLVQDKV CEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCEEEECCCCCEECCC GEGSCRSGSYDLSLRQEFTSAREPDGIAITPDGRYFVTADEDNLTNVNNQSYEGILLSPH CCCCCCCCCCCEEHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCC GTRSISVFDATTGELLGDSGNSIEESIIALGLPQRCNSKGPEPEVVSVGVVNGRTLAFVA CCCEEEEEECCCCCEECCCCCCHHHHHEEECCCHHHCCCCCCCCEEEEEEECCCEEEEEE IERSDAITIHDISNPRNVQLLDTVVLNPDVVRANQEAGFEPEGIEFIPATNQVIVSNPEG EECCCEEEEEECCCCCCEEEEEEEEECCCEEECCHHCCCCCCCEEEECCCCEEEEECCCC NAMSLVNINVMPR CEEEEEEEEEECC >Mature Secondary Structure MNLNSGVKSLVASMVKPKLKASFKLALLSTLAGLPLGTLIFPPQAIAQNATIRGEVVFTL CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCCEEEEEEEEEE TDLAGAEMLAVTKDGRHALVVGAKTATLVAIEDNALTVEGTWTLTDEFLPAGSADAELTG ECCCCCEEEEEECCCCEEEEEECCEEEEEEEECCEEEEEEEEEEEHHHCCCCCCCCEEEE VSISPDGAFALIGVKDADDANLDTFDEMPGKVVALSLPDLEPLGHVTVGRGPDSVAIAPN EEECCCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCCCCCCEEECCCCCEEEECCC GQFAAVANEDEENEEDLTNLENGAGTVSIIDLRRGPNRMTQVEVPIPPDNIPFFPHDPQP CCEEEEECCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC ETVRIAADSSFIVATLQENNAVARIEIPSPLPKRLTPDIFSVQNFDVGVRTGFGLVQDKV CEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCEEEECCCCCEECCC GEGSCRSGSYDLSLRQEFTSAREPDGIAITPDGRYFVTADEDNLTNVNNQSYEGILLSPH CCCCCCCCCCCEEHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCC GTRSISVFDATTGELLGDSGNSIEESIIALGLPQRCNSKGPEPEVVSVGVVNGRTLAFVA CCCEEEEEECCCCCEECCCCCCHHHHHEEECCCHHHCCCCCCCCEEEEEEECCCEEEEEE IERSDAITIHDISNPRNVQLLDTVVLNPDVVRANQEAGFEPEGIEFIPATNQVIVSNPEG EECCCEEEEEECCCCCCEEEEEEEEECCCEEECCHHCCCCCCCEEEECCCCEEEEECCCC NAMSLVNINVMPR CEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA