Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is ytfP [H]

Identifier: 170078950

GI number: 170078950

Start: 2436346

End: 2437578

Strand: Direct

Name: ytfP [H]

Synonym: SYNPCC7002_A2355

Alternate gene names: 170078950

Gene position: 2436346-2437578 (Clockwise)

Preceding gene: 170078947

Following gene: 170078951

Centisome position: 80.99

GC content: 51.91

Gene sequence:

>1233_bases
ATGGCAAGATTAATCGTCGTTGGGGGCGGTGCGGCGGGTTTTTTTGGGGCGATCGCCGCTGCCCGGACGAACCCAAAGTT
AGAGGTGATTATCCTCGAAGCGGGTAAAACATTTTTGAGCAAAGTGAAAATCTCTGGGGGCGGCCGCTGTAATGTTACCC
ACCATTGCTTTGATCCCGTGGAATTAGTCAAGGCCTATCCGAGGGGCCAGCGGGAATTACGGGGGGCCTTCAGTCAGTTT
CAACCCCAGGACATGATTGCTTGGCTCAAGGCCGAAGGGGTCAAGCTCAAAACCGAAGTCGACGGACGAATGTTCCCGGT
GACAGACGATTCCGAAACGATTATCCGGGCTTTTCTCGCAGCAGCAACCCAGGCAAAAATCCAATGTCGCACCGGGGCTG
TTGTGCAAAGCATTATTCAAGATGAAACAGGACAATTTCAGGTGAATCTCAAGGGGGGCGATCGCCTTTTGGCTGATTTC
ATTTTGTTGGCGACGGGAAGTCATCCTTCCGGGCATCGATTGGCCGCCACCTTGGGCCACAAGATTATTCCGCCGCAACC
ATCGTTATTTACGTTCCAGATTAATGATCCCCGTCTTCAGGGTTTAGCGGGAGTGAGTGTGTCTGAGGCGACCGTCAGCA
TCAAGTTAGATAAAAAGAAAAAGCTCGAACAAATGGGGCCACTGCTGATTACCCATTGGGGCCTCAGTGGGCCAGCGGTT
TTAAAACTCTCGGCTTGGGGGGCGCGCACGTTAGCCGAACACCGCTACACAATGTCCCTCACGGTGAATTGGCTCCCCGA
CATTAATCCAGAAACCCTCCGTCAAGACATCCAAACTTTTAAGACCCAACATCCCAAAAAGAAAATTACGACCCTTGCTC
CAGTAGACCTTCCCAAGCGTCTATGGCAAAGTTTGACCCAAGCTGCGGGGATCAGCCCCGATCAAAATTGGGCGGATCTC
GCGAAAAAACAACTGAATATCCTCTGTCAAGAATTAACCCAGGGCCAATACAACATCCAAGGGAAGGGCGTTTTCAAAGA
AGAATTTGTCACCTGCGGCGGTGTTTCCCTCAAGGAAGTGAACTTCAAAACCCTCGAAAGTCGCCGTTGTCCTGGCCTCT
TTTTCGCCGGGGAAGTGCTCGACATCGATGGGATTACGGGGGGCTTCAATTTCCAGAGTGCTTGGACGACCAGTTGGCTC
GCGGGTCAGGCGATCGCCCAAAATATTCATTAA

Upstream 100 bases:

>100_bases
TACGCTACTGCCGGGGGGCATCATCAATATCATGTTGCTCCTGACGCTCCTTTCTGGGATCCTCTATGGGCTGGAGTGGA
CAAAGAATTACTAACAAACC

Downstream 100 bases:

>100_bases
GATCACAACAACCTCATTCTTTTTTAAACCATGGTTCAAGCCGCGCCTCACCCCCAACATGTGACGTTTAGCGACCTCGC
CCAGGCCGCCATTCAGCTAA

Product: FAD dependent oxidoreductase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPVELVKAYPRGQRELRGAFSQF
QPQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLAAATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADF
ILLATGSHPSGHRLAATLGHKIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAV
LKLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKRLWQSLTQAAGISPDQNWADL
AKKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEVNFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWL
AGQAIAQNIH

Sequences:

>Translated_410_residues
MARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPVELVKAYPRGQRELRGAFSQF
QPQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLAAATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADF
ILLATGSHPSGHRLAATLGHKIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAV
LKLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKRLWQSLTQAAGISPDQNWADL
AKKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEVNFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWL
AGQAIAQNIH
>Mature_409_residues
ARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPVELVKAYPRGQRELRGAFSQFQ
PQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLAAATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADFI
LLATGSHPSGHRLAATLGHKIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAVL
KLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKRLWQSLTQAAGISPDQNWADLA
KKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEVNFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWLA
GQAIAQNIH

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=393, Percent_Identity=30.0254452926209, Blast_Score=165, Evalue=6e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 44776; Mature: 44645

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPV
CEEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHEEEECCCCEECCCCCCCCHH
ELVKAYPRGQRELRGAFSQFQPQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLA
HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHH
AATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADFILLATGSHPSGHRLAATLGH
HHHHCEEEEHHHHHHHHHHCCCCCEEEEEECCCHHHHEEEHEEEECCCCCCCCHHHHHCC
KIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAV
CCCCCCCCEEEEEECCCHHCCCCCCEEECEEEEEEECHHHHHHHHCCEEEEECCCCCCEE
LKLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKR
EEEECCCCHHHHHCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHCCEECCCCHHHH
LWQSLTQAAGISPDQNWADLAKKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEV
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHEECCCEEEEC
NFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWLAGQAIAQNIH
CHHHHHCCCCCCEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARLIVVGGGAAGFFGAIAAARTNPKLEVIILEAGKTFLSKVKISGGGRCNVTHHCFDPV
EEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHEEEECCCCEECCCCCCCCHH
ELVKAYPRGQRELRGAFSQFQPQDMIAWLKAEGVKLKTEVDGRMFPVTDDSETIIRAFLA
HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHH
AATQAKIQCRTGAVVQSIIQDETGQFQVNLKGGDRLLADFILLATGSHPSGHRLAATLGH
HHHHCEEEEHHHHHHHHHHCCCCCEEEEEECCCHHHHEEEHEEEECCCCCCCCHHHHHCC
KIIPPQPSLFTFQINDPRLQGLAGVSVSEATVSIKLDKKKKLEQMGPLLITHWGLSGPAV
CCCCCCCCEEEEEECCCHHCCCCCCEEECEEEEEEECHHHHHHHHCCEEEEECCCCCCEE
LKLSAWGARTLAEHRYTMSLTVNWLPDINPETLRQDIQTFKTQHPKKKITTLAPVDLPKR
EEEECCCCHHHHHCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHCCEECCCCHHHH
LWQSLTQAAGISPDQNWADLAKKQLNILCQELTQGQYNIQGKGVFKEEFVTCGGVSLKEV
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHEECCCEEEEC
NFKTLESRRCPGLFFAGEVLDIDGITGGFNFQSAWTTSWLAGQAIAQNIH
CHHHHHCCCCCCEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]