Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078939

Identifier: 170078939

GI number: 170078939

Start: 2422103

End: 2423425

Strand: Direct

Name: 170078939

Synonym: SYNPCC7002_A2344

Alternate gene names: NA

Gene position: 2422103-2423425 (Clockwise)

Preceding gene: 170078938

Following gene: 170078944

Centisome position: 80.52

GC content: 55.25

Gene sequence:

>1323_bases
ATGTTTTTTCCCTTCTTTGTTGCCCAAGCGCCGCCCCCAGTTGAAATTGTGCGTCCCCAGGAAGTACGGGTTTTACCGGG
ACAGCTAGACCAAACCCCTGTGTTTAATAGCAACAGCCCAGAAAAGGTGTTGGGGGAAGGGATTCTACTGTCCACATTTC
CGGCCACTGGCAAAACCCATCCAGATGCCCACCTCGATTTTGCCTTTTCGGGACGCTTTGATCTGTTTGCCCACCACGTC
GCCCAGGGTTCTCCGGAGGATCTACGCAGCCTACATATTGGGGCGATCGCCTACAATCCGAGTGATCAACCTGTTACCCT
TTATTTTCTGAATGGGGCTAGTTATTTAAGTCAACCGGATGCCCCTTTTATTGCCCTTGATCCCCAAGTGCCGAATCCGA
GGGGAAATGTCTACGCCGGGCCGGGCAGCCGGGTAATGGATAATCTGCTGCGTCGCCGTCTCCAGGAACAGTTCCCGAAG
CAGTTGACCATCGCCCCCCAGAACTACCAGATGATTTTTGATCTGCCGATTCCGGTGCGGGAATTGGAGCCTCCCCTCAA
TGGTCGCTCGACCTATTTGGAACTAACGAGCACTGGCCCCGTTTATGTGGCAAGTTTAGCCCTCTTTGAAAAGCCCGATG
GCCAAGGTGATTTCCGGCCTCCTACCCTGGCAGAATGGCAAGCACTCTTAGAAACCGGGGAACTCTCTAGCCCGCGCGAT
CGCGAACCTACAGTGCCCGGTGCCCCAGGGGGATTAATCTATGGTCGGGTGGCTGGCGTTTCTGAAGGCAGCACTTGGAA
AACCCAAATTTATGACAGTCCCACCTGGGATCTCACCATTCCTGCCCCAGGGGAAGCCTTTTCCTATGGCATCAGCACCC
TCGTCGGCGGCACCCATAGCACGGGCCAAATCCAAACGGCAGAAATGTTGCGCCGCTATCCGGATACCGCCTATGCTGCC
CACGGCAACTATGGGGTGCTCTATGATTTGACGCTGCCCCTCCACAATCCCACTGGGGCAACCCAAACCGTGGCGATCGC
CCTTGAAACGCCCATTAAACAAGATGCTACGGATGAAGCATTGCGCTTTTTTGAGCCCCTGCCGACGGCGACCTTTTTCC
GGGGGCCAGTGCGGGTCAACTACAAAGATGATACGGGCCGTTTGCGTACCGACTATTTCCACCTGGTGCAAAAGCGCGGC
CAAGCTGGGGAACCCCTCGTCACCCTGGAAATGCCCCCAGGCGATCGCCGTTTGGTGAATATCCAACTGCGCTATCCTCC
TGATGCGACGCCACCTCAAGTTTTAACCGTTAAAACCCAATAA

Upstream 100 bases:

>100_bases
GAAACGGGCTACGAGATTCTCACGGATCGCAATCTGGTGTAATTACCCAAAAAGCGAAAAAACTCAATACAATGGGCGGC
AATGTGTGTGGAATGTTGGT

Downstream 100 bases:

>100_bases
AAAAAGAACCATCGTCTTGATGATTCTCTTTGTTGAGCACTCAAATTGTGGTGTTATTCAGGTGAGCACTTCTTCGCGGA
CTAACTTATCCCAGCCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MFFPFFVAQAPPPVEIVRPQEVRVLPGQLDQTPVFNSNSPEKVLGEGILLSTFPATGKTHPDAHLDFAFSGRFDLFAHHV
AQGSPEDLRSLHIGAIAYNPSDQPVTLYFLNGASYLSQPDAPFIALDPQVPNPRGNVYAGPGSRVMDNLLRRRLQEQFPK
QLTIAPQNYQMIFDLPIPVRELEPPLNGRSTYLELTSTGPVYVASLALFEKPDGQGDFRPPTLAEWQALLETGELSSPRD
REPTVPGAPGGLIYGRVAGVSEGSTWKTQIYDSPTWDLTIPAPGEAFSYGISTLVGGTHSTGQIQTAEMLRRYPDTAYAA
HGNYGVLYDLTLPLHNPTGATQTVAIALETPIKQDATDEALRFFEPLPTATFFRGPVRVNYKDDTGRLRTDYFHLVQKRG
QAGEPLVTLEMPPGDRRLVNIQLRYPPDATPPQVLTVKTQ

Sequences:

>Translated_440_residues
MFFPFFVAQAPPPVEIVRPQEVRVLPGQLDQTPVFNSNSPEKVLGEGILLSTFPATGKTHPDAHLDFAFSGRFDLFAHHV
AQGSPEDLRSLHIGAIAYNPSDQPVTLYFLNGASYLSQPDAPFIALDPQVPNPRGNVYAGPGSRVMDNLLRRRLQEQFPK
QLTIAPQNYQMIFDLPIPVRELEPPLNGRSTYLELTSTGPVYVASLALFEKPDGQGDFRPPTLAEWQALLETGELSSPRD
REPTVPGAPGGLIYGRVAGVSEGSTWKTQIYDSPTWDLTIPAPGEAFSYGISTLVGGTHSTGQIQTAEMLRRYPDTAYAA
HGNYGVLYDLTLPLHNPTGATQTVAIALETPIKQDATDEALRFFEPLPTATFFRGPVRVNYKDDTGRLRTDYFHLVQKRG
QAGEPLVTLEMPPGDRRLVNIQLRYPPDATPPQVLTVKTQ
>Mature_440_residues
MFFPFFVAQAPPPVEIVRPQEVRVLPGQLDQTPVFNSNSPEKVLGEGILLSTFPATGKTHPDAHLDFAFSGRFDLFAHHV
AQGSPEDLRSLHIGAIAYNPSDQPVTLYFLNGASYLSQPDAPFIALDPQVPNPRGNVYAGPGSRVMDNLLRRRLQEQFPK
QLTIAPQNYQMIFDLPIPVRELEPPLNGRSTYLELTSTGPVYVASLALFEKPDGQGDFRPPTLAEWQALLETGELSSPRD
REPTVPGAPGGLIYGRVAGVSEGSTWKTQIYDSPTWDLTIPAPGEAFSYGISTLVGGTHSTGQIQTAEMLRRYPDTAYAA
HGNYGVLYDLTLPLHNPTGATQTVAIALETPIKQDATDEALRFFEPLPTATFFRGPVRVNYKDDTGRLRTDYFHLVQKRG
QAGEPLVTLEMPPGDRRLVNIQLRYPPDATPPQVLTVKTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48411; Mature: 48411

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFPFFVAQAPPPVEIVRPQEVRVLPGQLDQTPVFNSNSPEKVLGEGILLSTFPATGKTH
CCCCEEECCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCCCCC
PDAHLDFAFSGRFDLFAHHVAQGSPEDLRSLHIGAIAYNPSDQPVTLYFLNGASYLSQPD
CCCEEEEEECCCHHHHHHHHHCCCHHHHHEEEEEEEEECCCCCCEEEEEECCCHHCCCCC
APFIALDPQVPNPRGNVYAGPGSRVMDNLLRRRLQEQFPKQLTIAPQNYQMIFDLPIPVR
CCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCHH
ELEPPLNGRSTYLELTSTGPVYVASLALFEKPDGQGDFRPPTLAEWQALLETGELSSPRD
HCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
REPTVPGAPGGLIYGRVAGVSEGSTWKTQIYDSPTWDLTIPAPGEAFSYGISTLVGGTHS
CCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCC
TGQIQTAEMLRRYPDTAYAAHGNYGVLYDLTLPLHNPTGATQTVAIALETPIKQDATDEA
CCCEEHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCHHHH
LRFFEPLPTATFFRGPVRVNYKDDTGRLRTDYFHLVQKRGQAGEPLVTLEMPPGDRRLVN
HHHHCCCCCHHEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEE
IQLRYPPDATPPQVLTVKTQ
EEEECCCCCCCCCEEEEECC
>Mature Secondary Structure
MFFPFFVAQAPPPVEIVRPQEVRVLPGQLDQTPVFNSNSPEKVLGEGILLSTFPATGKTH
CCCCEEECCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCHHHHCCCEEEEECCCCCCCC
PDAHLDFAFSGRFDLFAHHVAQGSPEDLRSLHIGAIAYNPSDQPVTLYFLNGASYLSQPD
CCCEEEEEECCCHHHHHHHHHCCCHHHHHEEEEEEEEECCCCCCEEEEEECCCHHCCCCC
APFIALDPQVPNPRGNVYAGPGSRVMDNLLRRRLQEQFPKQLTIAPQNYQMIFDLPIPVR
CCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCHH
ELEPPLNGRSTYLELTSTGPVYVASLALFEKPDGQGDFRPPTLAEWQALLETGELSSPRD
HCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
REPTVPGAPGGLIYGRVAGVSEGSTWKTQIYDSPTWDLTIPAPGEAFSYGISTLVGGTHS
CCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCC
TGQIQTAEMLRRYPDTAYAAHGNYGVLYDLTLPLHNPTGATQTVAIALETPIKQDATDEA
CCCEEHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCHHHH
LRFFEPLPTATFFRGPVRVNYKDDTGRLRTDYFHLVQKRGQAGEPLVTLEMPPGDRRLVN
HHHHCCCCCHHEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEE
IQLRYPPDATPPQVLTVKTQ
EEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA