Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078944

Identifier: 170078944

GI number: 170078944

Start: 2427661

End: 2428065

Strand: Direct

Name: 170078944

Synonym: SYNPCC7002_A2349

Alternate gene names: NA

Gene position: 2427661-2428065 (Clockwise)

Preceding gene: 170078939

Following gene: 170078945

Centisome position: 80.71

GC content: 53.09

Gene sequence:

>405_bases
ATGGCTTCCTGTAATTGGCGGATTGCGGAGTTACCCGGCCTGAGCAAAGAACAACAGACCCAACTCGCCGCCCAAGGGAT
TCGCACCACCCATCAGCTTTTGTTAGCTACTCGCACATCCCAGGCAAAACAACAGTTAGCCCGTCGCCTCAAAATTCATC
CCAATTACGTTTTGAAATGGGTGGCCCTGGCGGATCTGGCGAGAGTACCGAGTATTGGCACACAATATTGCGGCCTAGTA
TTGCACAGTGGCGTGGCATCGGTAAATCAGCTCGCCCAAACACCCTTTTCGCGACTCCACCAAAATATTATGAAGTTACA
GGTGGCGAACCTCCAGCGTAAGGATCTGGCGCCGCCCCTGGGGTTGGTCAAGCAATGGGTGACAGAAGCACGACAGTTCC
TTTAG

Upstream 100 bases:

>100_bases
CTTTTTCGACAGATATACCAACAGTCATAAATTTTCTAAAGTTTTAGGGTAACGACAATTTTTCTTGATATCATGTGCTT
CCATTTTAACAAGGATTCCT

Downstream 100 bases:

>100_bases
ACATTGGACTAGGGCTTTGCTCTGGGAGGGAAAACACTGTAACCCAGAATCATTAAGCCTTGTGTGTTCTTAATCGGGTT
TTAACGACAAAGGGTTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MASCNWRIAELPGLSKEQQTQLAAQGIRTTHQLLLATRTSQAKQQLARRLKIHPNYVLKWVALADLARVPSIGTQYCGLV
LHSGVASVNQLAQTPFSRLHQNIMKLQVANLQRKDLAPPLGLVKQWVTEARQFL

Sequences:

>Translated_134_residues
MASCNWRIAELPGLSKEQQTQLAAQGIRTTHQLLLATRTSQAKQQLARRLKIHPNYVLKWVALADLARVPSIGTQYCGLV
LHSGVASVNQLAQTPFSRLHQNIMKLQVANLQRKDLAPPLGLVKQWVTEARQFL
>Mature_133_residues
ASCNWRIAELPGLSKEQQTQLAAQGIRTTHQLLLATRTSQAKQQLARRLKIHPNYVLKWVALADLARVPSIGTQYCGLVL
HSGVASVNQLAQTPFSRLHQNIMKLQVANLQRKDLAPPLGLVKQWVTEARQFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15000; Mature: 14869

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASCNWRIAELPGLSKEQQTQLAAQGIRTTHQLLLATRTSQAKQQLARRLKIHPNYVLKW
CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VALADLARVPSIGTQYCGLVLHSGVASVNQLAQTPFSRLHQNIMKLQVANLQRKDLAPPL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCH
GLVKQWVTEARQFL
HHHHHHHHHHHHCC
>Mature Secondary Structure 
ASCNWRIAELPGLSKEQQTQLAAQGIRTTHQLLLATRTSQAKQQLARRLKIHPNYVLKW
CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VALADLARVPSIGTQYCGLVLHSGVASVNQLAQTPFSRLHQNIMKLQVANLQRKDLAPPL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCH
GLVKQWVTEARQFL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA