| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078928
Identifier: 170078928
GI number: 170078928
Start: 2410573
End: 2411073
Strand: Direct
Name: 170078928
Synonym: SYNPCC7002_A2333
Alternate gene names: NA
Gene position: 2410573-2411073 (Clockwise)
Preceding gene: 170078927
Following gene: 170078930
Centisome position: 80.14
GC content: 46.11
Gene sequence:
>501_bases ATGAAACAGCGCTATATCTACTCATTATTGTTCCTATTACCTGGCTTCTCTGTCTCTCTACTGGGTACTTGGATAATAAT GGGTACTGTCCTCGGAATACTCTGGTTATATGTCTTTGGCGACAATCCATGGCCAACGTGGATAGAGCCGCTGATATCTG TCTTGTTTTTGTTAATATTCTCTGGCTCATGGCTAACAATTACCGTAGCGGGCTACCGTGTCGGCAAAAAATTAGAGGCG AGGTCAGGGTTTAAAAGCAAACACCTTTGGCTATCTCTATGGGCAACCTTACTACCAATCGCGATTATCTTGCTCCATCA GTTGGGTAATGGCAACCTCGGCCCCAAATCTCCACAAGAACGTTGTCACGACTATTGTCGTTATCATGGCTATCAATCCA GCAGCACATCGCCACAGAACTCTGGCGGACAAACCTGTAGTTGCCTGGGACAGTATGGTGCGATGGAAAGAATACAGCCG ATTGATCAATTGCCACGCTGA
Upstream 100 bases:
>100_bases TGTATCCGCGCCTGTACACACTACTTCACCACCCCCGCAGACATCGACCAATTGGCGATCGCCCTCACCACCCTCACCTG AGGCTCCCAAAACCTTTTAG
Downstream 100 bases:
>100_bases AGGGCGGAAGCGGTCAAGGCAAAATCCCCAATTCCTGTAAACAGCGACGGGTAACCTCCAGGCGAGCGGAACCATCTTGG GGACTATTGATATCAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKQRYIYSLLFLLPGFSVSLLGTWIIMGTVLGILWLYVFGDNPWPTWIEPLISVLFLLIFSGSWLTITVAGYRVGKKLEA RSGFKSKHLWLSLWATLLPIAIILLHQLGNGNLGPKSPQERCHDYCRYHGYQSSSTSPQNSGGQTCSCLGQYGAMERIQP IDQLPR
Sequences:
>Translated_166_residues MKQRYIYSLLFLLPGFSVSLLGTWIIMGTVLGILWLYVFGDNPWPTWIEPLISVLFLLIFSGSWLTITVAGYRVGKKLEA RSGFKSKHLWLSLWATLLPIAIILLHQLGNGNLGPKSPQERCHDYCRYHGYQSSSTSPQNSGGQTCSCLGQYGAMERIQP IDQLPR >Mature_166_residues MKQRYIYSLLFLLPGFSVSLLGTWIIMGTVLGILWLYVFGDNPWPTWIEPLISVLFLLIFSGSWLTITVAGYRVGKKLEA RSGFKSKHLWLSLWATLLPIAIILLHQLGNGNLGPKSPQERCHDYCRYHGYQSSSTSPQNSGGQTCSCLGQYGAMERIQP IDQLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18705; Mature: 18705
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRYIYSLLFLLPGFSVSLLGTWIIMGTVLGILWLYVFGDNPWPTWIEPLISVLFLLIF CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SGSWLTITVAGYRVGKKLEARSGFKSKHLWLSLWATLLPIAIILLHQLGNGNLGPKSPQE CCCEEEEEEECHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RCHDYCRYHGYQSSSTSPQNSGGQTCSCLGQYGAMERIQPIDQLPR HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCHHHCCCC >Mature Secondary Structure MKQRYIYSLLFLLPGFSVSLLGTWIIMGTVLGILWLYVFGDNPWPTWIEPLISVLFLLIF CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SGSWLTITVAGYRVGKKLEARSGFKSKHLWLSLWATLLPIAIILLHQLGNGNLGPKSPQE CCCEEEEEEECHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RCHDYCRYHGYQSSSTSPQNSGGQTCSCLGQYGAMERIQPIDQLPR HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA