Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078926

Identifier: 170078926

GI number: 170078926

Start: 2408744

End: 2409355

Strand: Direct

Name: 170078926

Synonym: SYNPCC7002_A2331

Alternate gene names: NA

Gene position: 2408744-2409355 (Clockwise)

Preceding gene: 170078925

Following gene: 170078927

Centisome position: 80.08

GC content: 51.31

Gene sequence:

>612_bases
ATGGAGAAAGATGCGAAAAGCCCCTTGATCCTGATCATTCCCTGCACCCTGTTAATGACTGTATTTTTCAGTGTTTGGAC
GATCTGTGTGGTGGCGATCGCCTGTGTGGTGGCCTGGTATCTCTGGCAACAGTACCGCTGGCAGCAACTCTCAATCACCC
TCACCCCCGATTTCCGTCGCCTGATCGAAGTAAACCAAGGAAAAATTACCGTAGCCGACTTAACCCTTGCTACGGGCTTA
TCGGGGAATGATGTCCGTTGGTTTCTCGAACGCAAAGCAAAGGAGTACGCCGCCCAGGCTGTTGTTTATCAAAAAACAGG
CATTGTTTATTACTTTTTGACCAGCGGTGCCCTGGGCAGTATGTTCAATGGCAGTGATCCCGAAATCCCAGAGCCAGACC
TCCAGGAACCCACGCCACCACCCTTAACTCCAAAATCACCGCCAGCACCGATGATTCAAACGGAACTCGCGAAACGTTTT
TCCGTACATCCCAGCACCCTCCGCAAACGCCGGGGCCGTGATAATTTTGCTGAATGGAGTCAGGCTAAAGATCCCGATAA
TATTCCCTGGCGCTACGATCCCAATACCCGTCAGTTTTCGCCCCAGCAATAA

Upstream 100 bases:

>100_bases
TCCAGCGCCTCACATTGTCTGTATCGAGCAGCCCCGTTTAGGCAACCCCGTTTAAACTTAGCAAGTAGACCCTTCTCACC
AGCATTGCCTGACAAAACCA

Downstream 100 bases:

>100_bases
CCCTGTTCATTTTTACCCCCATAATTTCATTCATTCTCCCATGCCCGATCTGCACCAACATCGCCAACAGTTTCCTGCCC
TCGCCCACAAAACTTACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MEKDAKSPLILIIPCTLLMTVFFSVWTICVVAIACVVAWYLWQQYRWQQLSITLTPDFRRLIEVNQGKITVADLTLATGL
SGNDVRWFLERKAKEYAAQAVVYQKTGIVYYFLTSGALGSMFNGSDPEIPEPDLQEPTPPPLTPKSPPAPMIQTELAKRF
SVHPSTLRKRRGRDNFAEWSQAKDPDNIPWRYDPNTRQFSPQQ

Sequences:

>Translated_203_residues
MEKDAKSPLILIIPCTLLMTVFFSVWTICVVAIACVVAWYLWQQYRWQQLSITLTPDFRRLIEVNQGKITVADLTLATGL
SGNDVRWFLERKAKEYAAQAVVYQKTGIVYYFLTSGALGSMFNGSDPEIPEPDLQEPTPPPLTPKSPPAPMIQTELAKRF
SVHPSTLRKRRGRDNFAEWSQAKDPDNIPWRYDPNTRQFSPQQ
>Mature_203_residues
MEKDAKSPLILIIPCTLLMTVFFSVWTICVVAIACVVAWYLWQQYRWQQLSITLTPDFRRLIEVNQGKITVADLTLATGL
SGNDVRWFLERKAKEYAAQAVVYQKTGIVYYFLTSGALGSMFNGSDPEIPEPDLQEPTPPPLTPKSPPAPMIQTELAKRF
SVHPSTLRKRRGRDNFAEWSQAKDPDNIPWRYDPNTRQFSPQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23192; Mature: 23192

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDAKSPLILIIPCTLLMTVFFSVWTICVVAIACVVAWYLWQQYRWQQLSITLTPDFRR
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHH
LIEVNQGKITVADLTLATGLSGNDVRWFLERKAKEYAAQAVVYQKTGIVYYFLTSGALGS
HHHCCCCEEEEEEEHEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCC
MFNGSDPEIPEPDLQEPTPPPLTPKSPPAPMIQTELAKRFSVHPSTLRKRRGRDNFAEWS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHH
QAKDPDNIPWRYDPNTRQFSPQQ
CCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MEKDAKSPLILIIPCTLLMTVFFSVWTICVVAIACVVAWYLWQQYRWQQLSITLTPDFRR
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHH
LIEVNQGKITVADLTLATGLSGNDVRWFLERKAKEYAAQAVVYQKTGIVYYFLTSGALGS
HHHCCCCEEEEEEEHEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCC
MFNGSDPEIPEPDLQEPTPPPLTPKSPPAPMIQTELAKRFSVHPSTLRKRRGRDNFAEWS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHH
QAKDPDNIPWRYDPNTRQFSPQQ
CCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA