Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078900

Identifier: 170078900

GI number: 170078900

Start: 2384495

End: 2385037

Strand: Reverse

Name: 170078900

Synonym: SYNPCC7002_A2305

Alternate gene names: NA

Gene position: 2385037-2384495 (Counterclockwise)

Preceding gene: 170078903

Following gene: 170078899

Centisome position: 79.29

GC content: 51.38

Gene sequence:

>543_bases
GTGAGCTTTTCCCAGAAGCCTTTTAGATTGCAACAAAAGACAAAATTTTCACCGACAGCCCAGGACAAATTCGGTAGCGA
TCTGACGGCCTCAGAGAATGAACTGCATAGGTTCTGGGGGGCCGCCACTACAACCCCGTGGAGGTTAGTCCCTAATCTCT
CAATTTATTCTCCTTTGCAATGGAGCAAAACCATGAAATCAACACAAGGTATTGGCGTACAGTTGTTGGATGGTCTGTCT
TTGGGGTTGATGGTGCTGTTGTCTGGTGTCCCAGCGGCGATCGCCACCCCCACAGAAATGACCTGTCCAGAGGGATGGCG
TCTCCATACCCAAGAACTCAATCCCCAGATCCGTGTCTGTTTACCCAAAAATATCCACCTCCCAACGCTCGCGGATCTCA
GCCGACAACCGGCCCAGGTGCAGGTGCAACAACTGCGAATTATCCAAACTGGCGCTCAGATCGATCCGAGCCACCCCAAG
GAATCCCACATTCAAAGTTCGAGCCGTGCCTCAATCCAGGTTTACCAACATACCAGCCAGTAA

Upstream 100 bases:

>100_bases
GCTTTCTCCCTCAGTAATACTTGATTTCAAACAATCACAACAGCATTGGGGGCACTTTTCAGGATTTTTCCGCCGCCCGA
AAATCTGCTCCATTAGTATA

Downstream 100 bases:

>100_bases
CAATTTGGCGAGTTGTCGGGGGTTGATATTGTGCCAGAGTCAGCAAGCTCTGGTTTTTTGTTGGCGAAAGTGACTGGGGA
GATTTTTTCTGAATCTAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSFSQKPFRLQQKTKFSPTAQDKFGSDLTASENELHRFWGAATTTPWRLVPNLSIYSPLQWSKTMKSTQGIGVQLLDGLS
LGLMVLLSGVPAAIATPTEMTCPEGWRLHTQELNPQIRVCLPKNIHLPTLADLSRQPAQVQVQQLRIIQTGAQIDPSHPK
ESHIQSSSRASIQVYQHTSQ

Sequences:

>Translated_180_residues
MSFSQKPFRLQQKTKFSPTAQDKFGSDLTASENELHRFWGAATTTPWRLVPNLSIYSPLQWSKTMKSTQGIGVQLLDGLS
LGLMVLLSGVPAAIATPTEMTCPEGWRLHTQELNPQIRVCLPKNIHLPTLADLSRQPAQVQVQQLRIIQTGAQIDPSHPK
ESHIQSSSRASIQVYQHTSQ
>Mature_179_residues
SFSQKPFRLQQKTKFSPTAQDKFGSDLTASENELHRFWGAATTTPWRLVPNLSIYSPLQWSKTMKSTQGIGVQLLDGLSL
GLMVLLSGVPAAIATPTEMTCPEGWRLHTQELNPQIRVCLPKNIHLPTLADLSRQPAQVQVQQLRIIQTGAQIDPSHPKE
SHIQSSSRASIQVYQHTSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20037; Mature: 19906

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSQKPFRLQQKTKFSPTAQDKFGSDLTASENELHRFWGAATTTPWRLVPNLSIYSPLQ
CCCCCCCCCHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCH
WSKTMKSTQGIGVQLLDGLSLGLMVLLSGVPAAIATPTEMTCPEGWRLHTQELNPQIRVC
HHHHHHHHCCCCEEECCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEHHHCCCEEEEE
LPKNIHLPTLADLSRQPAQVQVQQLRIIQTGAQIDPSHPKESHIQSSSRASIQVYQHTSQ
ECCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure 
SFSQKPFRLQQKTKFSPTAQDKFGSDLTASENELHRFWGAATTTPWRLVPNLSIYSPLQ
CCCCCCCCHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCH
WSKTMKSTQGIGVQLLDGLSLGLMVLLSGVPAAIATPTEMTCPEGWRLHTQELNPQIRVC
HHHHHHHHCCCCEEECCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEHHHCCCEEEEE
LPKNIHLPTLADLSRQPAQVQVQQLRIIQTGAQIDPSHPKESHIQSSSRASIQVYQHTSQ
ECCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA