| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is pstC [H]
Identifier: 170078881
GI number: 170078881
Start: 2368344
End: 2369282
Strand: Direct
Name: pstC [H]
Synonym: SYNPCC7002_A2285
Alternate gene names: 170078881
Gene position: 2368344-2369282 (Clockwise)
Preceding gene: 170078880
Following gene: 170078882
Centisome position: 78.73
GC content: 50.05
Gene sequence:
>939_bases ATGACAACTAGTCCTTTCCCCCCCCTTGCTGATGCGGGACTCTGGCGGACAACACGGACATTTAGTAAATGGAGCCAACG TTTAATCGTGGGGCTTTTTGGTTTATTTGCCCTGGTGTCAGTGTTAACCACGTTTGGAATTGTCATCACATTGGTCGTCG ATGCGGCGGGCTTCTTTAATGAGGTTTCCCTGTTTACTTTCCTAACAGATACCCGCTGGACACCACTATTTGTCGATCCA CAATTTGGTATTTTTGTGCTGGTTTCTGGCACCCTGATGACGACGGCGATCGCCATTTCCGTGGCCTTGCCGTTGGGTCT GTTGGCCGCTATTTGCTTAAGTGAATATGCTTCCCCTGGGATCCGAAAATGGCTCAAGCCCGCCCTCGAAATTCTGGCAG GGGTGCCCTCCGTTGTCTATGGTTATTTTGCCCTGTTATTGGTGACCCCAGCGCTACGGGCGATTATTCCAGGGCTTTCT CCCTTCAATGCCTTGAGTGCCGGTTTAGTGTTAGGGATTTCAATTTTGCCCTTGGTTGCCTCCCTCAGTGAAGATGCAAT CTATGCCGTGCCCGATAGCCTACGTCAAGGTTCCTACGGACTGGGGGCCACCAAACGAGAAACCATCGTGAATGTCGTCT TACCCGCCGCCTTGTCCGGGATTGTTTCTTCCTTTATTTTGGCCATTTCTAGGGCCGTCGGAGAAACAATGATTGTGACT ATTGCCGCTGGTTTAAACCCGACCCTCACCCTCAATCCCACGGTGCCCATCGCCACCATGACTGCTTTTATTGTTCAAGT TAGTCTTGGGGATGCCCCGGCTGGCAGTTTGGCTTTTAAGACCATTTATGCCGTTGGTTTATCTTTATTCTTAATCACCC TGACCCTAAACATCCTCAGTTACTGGGTTGTGCGTCGCTATAGACAGAAATACGAATGA
Upstream 100 bases:
>100_bases GGCAGATTCATTCAGAAAAGGCCCGACTCCCTTTATGCTTTGAATGAATACCGCTGTTTTGCAGTGGTGTTGGTAGATAA ATCATAAGTATTTAAAGATT
Downstream 100 bases:
>100_bases ATAGTAACCCTCCCAATTCTCAAAATACGAACACCCTGTTTGATACTCGTCTTAAAACCCGTTACCGCTGGGATACCGCA TTTCAAACTCTCAGTTGGAT
Product: phosphate ABC transporter, permease protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTTSPFPPLADAGLWRTTRTFSKWSQRLIVGLFGLFALVSVLTTFGIVITLVVDAAGFFNEVSLFTFLTDTRWTPLFVDP QFGIFVLVSGTLMTTAIAISVALPLGLLAAICLSEYASPGIRKWLKPALEILAGVPSVVYGYFALLLVTPALRAIIPGLS PFNALSAGLVLGISILPLVASLSEDAIYAVPDSLRQGSYGLGATKRETIVNVVLPAALSGIVSSFILAISRAVGETMIVT IAAGLNPTLTLNPTVPIATMTAFIVQVSLGDAPAGSLAFKTIYAVGLSLFLITLTLNILSYWVVRRYRQKYE
Sequences:
>Translated_312_residues MTTSPFPPLADAGLWRTTRTFSKWSQRLIVGLFGLFALVSVLTTFGIVITLVVDAAGFFNEVSLFTFLTDTRWTPLFVDP QFGIFVLVSGTLMTTAIAISVALPLGLLAAICLSEYASPGIRKWLKPALEILAGVPSVVYGYFALLLVTPALRAIIPGLS PFNALSAGLVLGISILPLVASLSEDAIYAVPDSLRQGSYGLGATKRETIVNVVLPAALSGIVSSFILAISRAVGETMIVT IAAGLNPTLTLNPTVPIATMTAFIVQVSLGDAPAGSLAFKTIYAVGLSLFLITLTLNILSYWVVRRYRQKYE >Mature_311_residues TTSPFPPLADAGLWRTTRTFSKWSQRLIVGLFGLFALVSVLTTFGIVITLVVDAAGFFNEVSLFTFLTDTRWTPLFVDPQ FGIFVLVSGTLMTTAIAISVALPLGLLAAICLSEYASPGIRKWLKPALEILAGVPSVVYGYFALLLVTPALRAIIPGLSP FNALSAGLVLGISILPLVASLSEDAIYAVPDSLRQGSYGLGATKRETIVNVVLPAALSGIVSSFILAISRAVGETMIVTI AAGLNPTLTLNPTVPIATMTAFIVQVSLGDAPAGSLAFKTIYAVGLSLFLITLTLNILSYWVVRRYRQKYE
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=299, Percent_Identity=28.0936454849498, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790163, Length=211, Percent_Identity=29.3838862559242, Blast_Score=74, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33190; Mature: 33059
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPFPPLADAGLWRTTRTFSKWSQRLIVGLFGLFALVSVLTTFGIVITLVVDAAGFFN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVSLFTFLTDTRWTPLFVDPQFGIFVLVSGTLMTTAIAISVALPLGLLAAICLSEYASPG HHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH IRKWLKPALEILAGVPSVVYGYFALLLVTPALRAIIPGLSPFNALSAGLVLGISILPLVA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SLSEDAIYAVPDSLRQGSYGLGATKRETIVNVVLPAALSGIVSSFILAISRAVGETMIVT HHCCCCEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE IAAGLNPTLTLNPTVPIATMTAFIVQVSLGDAPAGSLAFKTIYAVGLSLFLITLTLNILS EECCCCCCEEECCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YWVVRRYRQKYE HHHHHHHHHHCC >Mature Secondary Structure TTSPFPPLADAGLWRTTRTFSKWSQRLIVGLFGLFALVSVLTTFGIVITLVVDAAGFFN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVSLFTFLTDTRWTPLFVDPQFGIFVLVSGTLMTTAIAISVALPLGLLAAICLSEYASPG HHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH IRKWLKPALEILAGVPSVVYGYFALLLVTPALRAIIPGLSPFNALSAGLVLGISILPLVA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SLSEDAIYAVPDSLRQGSYGLGATKRETIVNVVLPAALSGIVSSFILAISRAVGETMIVT HHCCCCEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE IAAGLNPTLTLNPTVPIATMTAFIVQVSLGDAPAGSLAFKTIYAVGLSLFLITLTLNILS EECCCCCCEEECCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YWVVRRYRQKYE HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]