| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is pstS [H]
Identifier: 170078880
GI number: 170078880
Start: 2367149
End: 2368213
Strand: Direct
Name: pstS [H]
Synonym: SYNPCC7002_A2284
Alternate gene names: 170078880
Gene position: 2367149-2368213 (Clockwise)
Preceding gene: 170078878
Following gene: 170078881
Centisome position: 78.69
GC content: 51.17
Gene sequence:
>1065_bases ATGAAACAGAGCGCTACTCGCCTCCGTACCTTATCTTTGGGTCTTGCTGGCCTCACCCTTACCGCTGCACTTGCAGCTTG TAACACTACCCAAACACCGACTGAAGGCACTGGCACAACTGATGCTCCTGCAGATAGTGCGTCTGGTTTGTCTGGCGATG TCCTCATTGATGGTTCTAGTACCGTTTTCCCGATTACCGAAGCCATGGCCGAGGAATTCCAAATCGCAAACCCCGATACC CGCGTAACCGTTGGGGTTTCCGGGACTGGTGGTGGATTTTCTAAGTTCTGCGCTGGCGAAACTGATATTTCTAACGCTTC CCGCCCGATTTCCACCGAAGAAATCGAAGCTTGTGAACAGGCTGGCATCGAATATATCGAAATTCCCGTCGCCTATGACG CTATCTCCGTGGTTATTAACCCCGAAAACGATTGGGCCACTTGTTTAACCACCGAAGAATTGGCTAGCATTTGGTCTCCT GATTCTCAAATTAACAACTGGAGTCAAGTACGGGAAGGCTTCCCGGATGCTCCCCTCACTCTCTATGGGCCAGGGACTGA CTCTGGAACTTTCGACTACTTCACCGACGCCATCAATGGTGAAGAAGGGGCTAGCCGGGGTGATTACACTGCCAGTGAAG ATGACAACGTTGTTGTCCAAGGGGTTGTGAATGATCCCAACGCCATGGGCTATTTCGGTTTGGCTTACTACGAAGAAAAT GCTGATAACTTGAATGCGGCGGCCATTGATGACGGCGATCCCAGCAATGGTGATGGCTGTGTGGCTCCTAGCACTGCGAC GGTAGACGACTCTACCTATCAGCCTTTGGCTCGCCCTATTTTCATCTACGTTAGTGCAGCGTCTTTGGATGAGAAGCCCC AGGTTCAAGCCTTCATGGACTTCTACACGGCTGAAGAAAATTCTTCCCTCGTTTCTGAAGTTGGCTATGTTGCCCTCAAT TCTGAAATCTACGCCAAGGCCCAGGAACGCCTTGCTGCTCGCACCACTGGTTCGATCTTTAATGGTGGTTCCACCGTCGG TGTTCGATTGGGTGAAGTTCTCTAG
Upstream 100 bases:
>100_bases CTCTGACTAGCAGTCAATGCCTGAAAGCCTCGATCTCGCTAAAAAGTTTTAATCCATCGCTCACTTACGCTTAATTGCAC AGTACACAATAGAGGAAACT
Downstream 100 bases:
>100_bases GTTTTATTTTTAGGTTTCGCTGGGGAGTGGGGCAGATTCATTCAGAAAAGGCCCGACTCCCTTTATGCTTTGAATGAATA CCGCTGTTTTGCAGTGGTGT
Product: phosphate transport system substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKQSATRLRTLSLGLAGLTLTAALAACNTTQTPTEGTGTTDAPADSASGLSGDVLIDGSSTVFPITEAMAEEFQIANPDT RVTVGVSGTGGGFSKFCAGETDISNASRPISTEEIEACEQAGIEYIEIPVAYDAISVVINPENDWATCLTTEELASIWSP DSQINNWSQVREGFPDAPLTLYGPGTDSGTFDYFTDAINGEEGASRGDYTASEDDNVVVQGVVNDPNAMGYFGLAYYEEN ADNLNAAAIDDGDPSNGDGCVAPSTATVDDSTYQPLARPIFIYVSAASLDEKPQVQAFMDFYTAEENSSLVSEVGYVALN SEIYAKAQERLAARTTGSIFNGGSTVGVRLGEVL
Sequences:
>Translated_354_residues MKQSATRLRTLSLGLAGLTLTAALAACNTTQTPTEGTGTTDAPADSASGLSGDVLIDGSSTVFPITEAMAEEFQIANPDT RVTVGVSGTGGGFSKFCAGETDISNASRPISTEEIEACEQAGIEYIEIPVAYDAISVVINPENDWATCLTTEELASIWSP DSQINNWSQVREGFPDAPLTLYGPGTDSGTFDYFTDAINGEEGASRGDYTASEDDNVVVQGVVNDPNAMGYFGLAYYEEN ADNLNAAAIDDGDPSNGDGCVAPSTATVDDSTYQPLARPIFIYVSAASLDEKPQVQAFMDFYTAEENSSLVSEVGYVALN SEIYAKAQERLAARTTGSIFNGGSTVGVRLGEVL >Mature_354_residues MKQSATRLRTLSLGLAGLTLTAALAACNTTQTPTEGTGTTDAPADSASGLSGDVLIDGSSTVFPITEAMAEEFQIANPDT RVTVGVSGTGGGFSKFCAGETDISNASRPISTEEIEACEQAGIEYIEIPVAYDAISVVINPENDWATCLTTEELASIWSP DSQINNWSQVREGFPDAPLTLYGPGTDSGTFDYFTDAINGEEGASRGDYTASEDDNVVVQGVVNDPNAMGYFGLAYYEEN ADNLNAAAIDDGDPSNGDGCVAPSTATVDDSTYQPLARPIFIYVSAASLDEKPQVQAFMDFYTAEENSSLVSEVGYVALN SEIYAKAQERLAARTTGSIFNGGSTVGVRLGEVL
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37095; Mature: 37095
Theoretical pI: Translated: 3.57; Mature: 3.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSATRLRTLSLGLAGLTLTAALAACNTTQTPTEGTGTTDAPADSASGLSGDVLIDGSS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC TVFPITEAMAEEFQIANPDTRVTVGVSGTGGGFSKFCAGETDISNASRPISTEEIEACEQ CEEHHHHHHHHHEECCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHH AGIEYIEIPVAYDAISVVINPENDWATCLTTEELASIWSPDSQINNWSQVREGFPDAPLT CCCEEEEEEEEEEEEEEEECCCCCCEEEEEHHHHHHHCCCCHHCCCHHHHHCCCCCCCEE LYGPGTDSGTFDYFTDAINGEEGASRGDYTASEDDNVVVQGVVNDPNAMGYFGLAYYEEN EECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECC ADNLNAAAIDDGDPSNGDGCVAPSTATVDDSTYQPLARPIFIYVSAASLDEKPQVQAFMD CCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHH FYTAEENSSLVSEVGYVALNSEIYAKAQERLAARTTGSIFNGGSTVGVRLGEVL HHHCCCCCHHHHHHCEEEECHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCC >Mature Secondary Structure MKQSATRLRTLSLGLAGLTLTAALAACNTTQTPTEGTGTTDAPADSASGLSGDVLIDGSS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC TVFPITEAMAEEFQIANPDTRVTVGVSGTGGGFSKFCAGETDISNASRPISTEEIEACEQ CEEHHHHHHHHHEECCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHH AGIEYIEIPVAYDAISVVINPENDWATCLTTEELASIWSPDSQINNWSQVREGFPDAPLT CCCEEEEEEEEEEEEEEEECCCCCCEEEEEHHHHHHHCCCCHHCCCHHHHHCCCCCCCEE LYGPGTDSGTFDYFTDAINGEEGASRGDYTASEDDNVVVQGVVNDPNAMGYFGLAYYEEN EECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECC ADNLNAAAIDDGDPSNGDGCVAPSTATVDDSTYQPLARPIFIYVSAASLDEKPQVQAFMD CCCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHH FYTAEENSSLVSEVGYVALNSEIYAKAQERLAARTTGSIFNGGSTVGVRLGEVL HHHCCCCCHHHHHHCEEEECHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]