Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078874

Identifier: 170078874

GI number: 170078874

Start: 2361674

End: 2362420

Strand: Reverse

Name: 170078874

Synonym: SYNPCC7002_A2278

Alternate gene names: NA

Gene position: 2362420-2361674 (Counterclockwise)

Preceding gene: 170078875

Following gene: 170078873

Centisome position: 78.54

GC content: 51.41

Gene sequence:

>747_bases
GTGCCTCGTGGATGGTTGGGCGATCGCCACTGCCCTGACTTTGTCCTAAGCTCCGGACATTATCTGCGGTTCTGGGCTTC
AGATCTGAGATTTCCTTCTAATGTGGAAACAAAGTCATCTGCAAGGGAAGGAAGAAAAAACATGGTGCGAGTCAAACCTT
ACCTATTTTGTTTGGCGATCGGGTGTTGGCTGGGTGCGACCCCAGGGGCGATCGCCAACCCGGAACCCGGTTGGGAACCC
TGGCGACCCAACGAAACAGAAGACGACAACTGGTCGTTTAGTGCGGGGTTTTCTAATCTGGAACTGGGGGGCTACATGGA
CTATGAATATACCTGCACCCAAGCCGCTACAGCAGCAGGGCAAGAACCCGTTTTTGAATATCGCTTAAATAGTTTAGTCA
AGGCTATTGGCACAGGTCAGGTGCAATATCGCTGCCTCGTCAATGATCAAGTCGTTGCCCAGCACACCAGTACAGCCACC
TTAAATGATCAACCCTCTCGCGGTTGTTTGATCGTTCAGAGTGATTTGGGGACGGGTCTTAATGTTAGGCAGGAACCCAC
TGTCTCAGCGCCAGTTGTAGGCTTTCTCAGCAACGGCAGTCAGATTATGGTGACAGGATCGCCCGCCTATCTCAGTGAAG
ATGCCACCGGACGAACTTGGCTTTATATTCCCTTTCAGCAGGATTACGCCTGGACATCTGTCATGGCCGAAGCCGGTGGT
CACATTAATTACCGCTTCTGTGATTAA

Upstream 100 bases:

>100_bases
TGGGCTTGATTGAAGCACAAACCAATATTGATACCAGCGATGTGCGGCCCCTGTCTCAACCGTGGATGTACATGATTTTG
CTGGGGTTTACGGTGCTGCT

Downstream 100 bases:

>100_bases
TCAGGCTCAATTTTTGGTTTGCGATTCCCCAGGCGATCGCCACTGCCTTAACCTAGGCATAACACGCTAAAATCAGGGTT
CTGTTTCGGGACTTGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPRGWLGDRHCPDFVLSSGHYLRFWASDLRFPSNVETKSSAREGRKNMVRVKPYLFCLAIGCWLGATPGAIANPEPGWEP
WRPNETEDDNWSFSAGFSNLELGGYMDYEYTCTQAATAAGQEPVFEYRLNSLVKAIGTGQVQYRCLVNDQVVAQHTSTAT
LNDQPSRGCLIVQSDLGTGLNVRQEPTVSAPVVGFLSNGSQIMVTGSPAYLSEDATGRTWLYIPFQQDYAWTSVMAEAGG
HINYRFCD

Sequences:

>Translated_248_residues
MPRGWLGDRHCPDFVLSSGHYLRFWASDLRFPSNVETKSSAREGRKNMVRVKPYLFCLAIGCWLGATPGAIANPEPGWEP
WRPNETEDDNWSFSAGFSNLELGGYMDYEYTCTQAATAAGQEPVFEYRLNSLVKAIGTGQVQYRCLVNDQVVAQHTSTAT
LNDQPSRGCLIVQSDLGTGLNVRQEPTVSAPVVGFLSNGSQIMVTGSPAYLSEDATGRTWLYIPFQQDYAWTSVMAEAGG
HINYRFCD
>Mature_247_residues
PRGWLGDRHCPDFVLSSGHYLRFWASDLRFPSNVETKSSAREGRKNMVRVKPYLFCLAIGCWLGATPGAIANPEPGWEPW
RPNETEDDNWSFSAGFSNLELGGYMDYEYTCTQAATAAGQEPVFEYRLNSLVKAIGTGQVQYRCLVNDQVVAQHTSTATL
NDQPSRGCLIVQSDLGTGLNVRQEPTVSAPVVGFLSNGSQIMVTGSPAYLSEDATGRTWLYIPFQQDYAWTSVMAEAGGH
INYRFCD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27457; Mature: 27326

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRGWLGDRHCPDFVLSSGHYLRFWASDLRFPSNVETKSSAREGRKNMVRVKPYLFCLAI
CCCCCCCCCCCCHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHCEEEEHHHHHHHHH
GCWLGATPGAIANPEPGWEPWRPNETEDDNWSFSAGFSNLELGGYMDYEYTCTQAATAAG
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCEECCEEEHHHHHHCCC
QEPVFEYRLNSLVKAIGTGQVQYRCLVNDQVVAQHTSTATLNDQPSRGCLIVQSDLGTGL
CCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCEECCCCCCCCEEEEECCCCCCC
NVRQEPTVSAPVVGFLSNGSQIMVTGSPAYLSEDATGRTWLYIPFQQDYAWTSVMAEAGG
CCCCCCCCCCCEEEEECCCCEEEEECCCCEECCCCCCCEEEEEEECCCCHHHHHHHHCCC
HINYRFCD
EEEEEECC
>Mature Secondary Structure 
PRGWLGDRHCPDFVLSSGHYLRFWASDLRFPSNVETKSSAREGRKNMVRVKPYLFCLAI
CCCCCCCCCCCHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHCEEEEHHHHHHHHH
GCWLGATPGAIANPEPGWEPWRPNETEDDNWSFSAGFSNLELGGYMDYEYTCTQAATAAG
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCEECCEEEHHHHHHCCC
QEPVFEYRLNSLVKAIGTGQVQYRCLVNDQVVAQHTSTATLNDQPSRGCLIVQSDLGTGL
CCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCEECCCCCCCCEEEEECCCCCCC
NVRQEPTVSAPVVGFLSNGSQIMVTGSPAYLSEDATGRTWLYIPFQQDYAWTSVMAEAGG
CCCCCCCCCCCEEEEECCCCEEEEECCCCEECCCCCCCEEEEEEECCCCHHHHHHHHCCC
HINYRFCD
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA