Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078870

Identifier: 170078870

GI number: 170078870

Start: 2356253

End: 2358457

Strand: Reverse

Name: 170078870

Synonym: SYNPCC7002_A2274

Alternate gene names: NA

Gene position: 2358457-2356253 (Counterclockwise)

Preceding gene: 170078871

Following gene: 170078869

Centisome position: 78.4

GC content: 54.78

Gene sequence:

>2205_bases
ATGGTGCACTGGCAATTTCTGCTACAAAAAAAAGGCGATCGCAATTGGGACATCCTCCAGACCGAGACCCTGAGCTTAGC
GCCTGGGGAGTATCGTCTAGCTGCCCGGGGCGACGCCCAAGTAGAAATTCACTGTGAGATTTGCTTCCCCCAAGGGCAAA
GATCGCAGCGCACAGATGTCACCACCGACCAGGGCTTATTTGCGATCATGCCCCTGCAACACCTCGGTGCTGGAAAGTGG
GTGATCATCTGCCGGAGCCTTGAGGTGACTAACCCTTGGGAAAAACGTCTCATGCTCCAGGTCACCCAGCCAACATTTAA
GCCGTTGCCGCTGCCCCCAAACCCCAATGTCTTTTCCTTTGAAACAACGTTTTCCTTGGCAGACAGTCACCCAAAAACAG
CAGATCAGCCTACCCAAAAAACAAGCGACGATATTCCCCCTCCACGGGAGGAAACAGCAGCAACACCCGTGATGAATTCT
TTGGCCGACGCTGACCAAAGTGCAGCAAACCATGAAACGTTAGAAGAATTAGCCGGAGTAGATGAGGCTCCCACTCTGTT
AGAAACATCAGAAACATCCACACCCCCAGCATCTCCAGAACCAGACGAAGAGGAACACGCCACCGCCCTGCTAGAAGATT
CCCTCACGGCATTGGATGAGCTGCTCAGGGAAGAATTAGAGCCGATTTGGGCAGAAATGGATCAAGTGGCCCAAGCTCAA
ATTGCCGCTGCACCACCTGCGCCGCCCACTTTGGATATTCCTCCGGCCCCACTCCCCTATCAGATCGTTCTGGCGCAGAC
CGTTTATCCTTGGGACACAACTCATGCACCGGAACTCCGGGGAGAAATTCAACCCAATCCCGCCGCTGGCGATCGCCAAC
CAATTTCTGAGCCTGGCACCCTAACGTTTACCCTCCGGGATCCCCAGACAGCCACAGTGGTAACCACCTTAACGGCGGCG
ATCGCCCTTGATGATTTTCCCTGTGCCTTTAGCCAAACCATTACCATCGATGGGTCTTTGACAACCCTGCTCTTGGTCGG
CGAAATTACTTTACACATAGGGGCAGGGGCATTACTCGCCCAGCAAACCTTTAGCCTCATGGCAGATTATGGGGCGATCG
CCAGTCAACTCCAAGCAACCGCGCCCCCAAAACCAGACTCCCCAGCGCCAACTACGCCCACACCCAAACCCCTCAAGCTT
CCTACCCCTGAGGCCGTGGCCCCTAGTCCCCAGCCTCAAAGTCAGCAAACCCCGACCATTCTGCCCCCCAAGCTCAAAGC
CAAAAGCCAAAAGTCAACCACGGGTCTGCAATTGCCCAACTTTACCCCCAAGGCGACTGTGTCTGATGTTCCCCCGTCAG
ACCAAACTGAACCGACCGATGAAGCACCTGTAAGCTCCTCGGATCATGCCCTAGAAGTCTCAGAAGCTAATGACCCCCAG
ACAGCGGCACCAGCAATAGACACAGATACTGCTGCACAAAATTCTAATCCCCCTGCTGCCGAAGCCTCAGAAACGCCTCC
GGCAGAGGATTTGGATTGGAATTCACGGTTTTTTACCCGGTTAAATGCCCTGGCCGTGGATGGGGAAGATTCCACCTGGT
TAATGCCTGAACCGGAACCGCCAACAGTCCCCCCTGAAGCAACCCTAGAAGCAGAGAACCCAACACCGACACCATCGCCC
CGCTTGGAAATTGTTGTTGATAGCCTCTGGGATGAGCAACTTGAAGTCCAAAGCCCAGAAGAGGTACCGGAAACAACCCC
GGAAACAGCGTCTGAATTCCCTGAGCCGGAAATGCCTTTAGCTCCAGAAACACAAACTAATCCACCACCATTACCAGTCC
CAGAACCCCAGCTTCACCTTGATAAAACGGCCTACCAGGTGGCAGATTTAGCCGTCGTTGAGTTGAGTTTACCCGCCGGG
GGCGATCGCCTCCATGGACAACTGTGGCTCCAGGATCGCCAAACGCGGGAACTTTTAGCCGGGCCATTTCAACTAATGAC
CTTTACCCCAGGCCCCGAAGGACGGCTCTATTGTCGCCAAGTGGTTTCGATTCCCCCCGGTGCTTTGGCGTTGAGGTTTG
AGGCGATCGCCCTTGACCCCCACTCCCAGCAAGAAAGCCGTAAAGTGAGCCAAGACTGTCAGGTGTTGCCAACCGCAGCC
ACGAACGGAGACTGGCCTGCCCTCGAATCTGGAGAATCTTGGTGA

Upstream 100 bases:

>100_bases
GCCCAAGAAACCCTGGCCCAAGCGGATCTGCTGGGAAATCTTGAGTCATGGCGTCAAAAAATGCAGCAGGCAAAACATTA
GAACCCCAGAGGAGGCGTCG

Downstream 100 bases:

>100_bases
TGTTACCCTTGGGCAAAGGATCGTCCACTCGGTTTGTCTGGCATAACGGAGCATTTTGATGAAAAAACCCATCCTGATCA
TTGCGAGTTCAATTTTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 734; Mature: 734

Protein sequence:

>734_residues
MVHWQFLLQKKGDRNWDILQTETLSLAPGEYRLAARGDAQVEIHCEICFPQGQRSQRTDVTTDQGLFAIMPLQHLGAGKW
VIICRSLEVTNPWEKRLMLQVTQPTFKPLPLPPNPNVFSFETTFSLADSHPKTADQPTQKTSDDIPPPREETAATPVMNS
LADADQSAANHETLEELAGVDEAPTLLETSETSTPPASPEPDEEEHATALLEDSLTALDELLREELEPIWAEMDQVAQAQ
IAAAPPAPPTLDIPPAPLPYQIVLAQTVYPWDTTHAPELRGEIQPNPAAGDRQPISEPGTLTFTLRDPQTATVVTTLTAA
IALDDFPCAFSQTITIDGSLTTLLLVGEITLHIGAGALLAQQTFSLMADYGAIASQLQATAPPKPDSPAPTTPTPKPLKL
PTPEAVAPSPQPQSQQTPTILPPKLKAKSQKSTTGLQLPNFTPKATVSDVPPSDQTEPTDEAPVSSSDHALEVSEANDPQ
TAAPAIDTDTAAQNSNPPAAEASETPPAEDLDWNSRFFTRLNALAVDGEDSTWLMPEPEPPTVPPEATLEAENPTPTPSP
RLEIVVDSLWDEQLEVQSPEEVPETTPETASEFPEPEMPLAPETQTNPPPLPVPEPQLHLDKTAYQVADLAVVELSLPAG
GDRLHGQLWLQDRQTRELLAGPFQLMTFTPGPEGRLYCRQVVSIPPGALALRFEAIALDPHSQQESRKVSQDCQVLPTAA
TNGDWPALESGESW

Sequences:

>Translated_734_residues
MVHWQFLLQKKGDRNWDILQTETLSLAPGEYRLAARGDAQVEIHCEICFPQGQRSQRTDVTTDQGLFAIMPLQHLGAGKW
VIICRSLEVTNPWEKRLMLQVTQPTFKPLPLPPNPNVFSFETTFSLADSHPKTADQPTQKTSDDIPPPREETAATPVMNS
LADADQSAANHETLEELAGVDEAPTLLETSETSTPPASPEPDEEEHATALLEDSLTALDELLREELEPIWAEMDQVAQAQ
IAAAPPAPPTLDIPPAPLPYQIVLAQTVYPWDTTHAPELRGEIQPNPAAGDRQPISEPGTLTFTLRDPQTATVVTTLTAA
IALDDFPCAFSQTITIDGSLTTLLLVGEITLHIGAGALLAQQTFSLMADYGAIASQLQATAPPKPDSPAPTTPTPKPLKL
PTPEAVAPSPQPQSQQTPTILPPKLKAKSQKSTTGLQLPNFTPKATVSDVPPSDQTEPTDEAPVSSSDHALEVSEANDPQ
TAAPAIDTDTAAQNSNPPAAEASETPPAEDLDWNSRFFTRLNALAVDGEDSTWLMPEPEPPTVPPEATLEAENPTPTPSP
RLEIVVDSLWDEQLEVQSPEEVPETTPETASEFPEPEMPLAPETQTNPPPLPVPEPQLHLDKTAYQVADLAVVELSLPAG
GDRLHGQLWLQDRQTRELLAGPFQLMTFTPGPEGRLYCRQVVSIPPGALALRFEAIALDPHSQQESRKVSQDCQVLPTAA
TNGDWPALESGESW
>Mature_734_residues
MVHWQFLLQKKGDRNWDILQTETLSLAPGEYRLAARGDAQVEIHCEICFPQGQRSQRTDVTTDQGLFAIMPLQHLGAGKW
VIICRSLEVTNPWEKRLMLQVTQPTFKPLPLPPNPNVFSFETTFSLADSHPKTADQPTQKTSDDIPPPREETAATPVMNS
LADADQSAANHETLEELAGVDEAPTLLETSETSTPPASPEPDEEEHATALLEDSLTALDELLREELEPIWAEMDQVAQAQ
IAAAPPAPPTLDIPPAPLPYQIVLAQTVYPWDTTHAPELRGEIQPNPAAGDRQPISEPGTLTFTLRDPQTATVVTTLTAA
IALDDFPCAFSQTITIDGSLTTLLLVGEITLHIGAGALLAQQTFSLMADYGAIASQLQATAPPKPDSPAPTTPTPKPLKL
PTPEAVAPSPQPQSQQTPTILPPKLKAKSQKSTTGLQLPNFTPKATVSDVPPSDQTEPTDEAPVSSSDHALEVSEANDPQ
TAAPAIDTDTAAQNSNPPAAEASETPPAEDLDWNSRFFTRLNALAVDGEDSTWLMPEPEPPTVPPEATLEAENPTPTPSP
RLEIVVDSLWDEQLEVQSPEEVPETTPETASEFPEPEMPLAPETQTNPPPLPVPEPQLHLDKTAYQVADLAVVELSLPAG
GDRLHGQLWLQDRQTRELLAGPFQLMTFTPGPEGRLYCRQVVSIPPGALALRFEAIALDPHSQQESRKVSQDCQVLPTAA
TNGDWPALESGESW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79328; Mature: 79328

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHWQFLLQKKGDRNWDILQTETLSLAPGEYRLAARGDAQVEIHCEICFPQGQRSQRTDV
CCCEEEEHCCCCCCCCCEEEEEEEEECCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCC
TTDQGLFAIMPLQHLGAGKWVIICRSLEVTNPWEKRLMLQVTQPTFKPLPLPPNPNVFSF
CCCCCEEEEECHHHCCCCCEEEEEEECCCCCHHHHEEEEEECCCCCCCCCCCCCCCEEEE
ETTFSLADSHPKTADQPTQKTSDDIPPPREETAATPVMNSLADADQSAANHETLEELAGV
EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
DEAPTLLETSETSTPPASPEPDEEEHATALLEDSLTALDELLREELEPIWAEMDQVAQAQ
CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAAPPAPPTLDIPPAPLPYQIVLAQTVYPWDTTHAPELRGEIQPNPAAGDRQPISEPGT
HCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCE
LTFTLRDPQTATVVTTLTAAIALDDFPCAFSQTITIDGSLTTLLLVGEITLHIGAGALLA
EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEEEEECCCHHHH
QQTFSLMADYGAIASQLQATAPPKPDSPAPTTPTPKPLKLPTPEAVAPSPQPQSQQTPTI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPPKLKAKSQKSTTGLQLPNFTPKATVSDVPPSDQTEPTDEAPVSSSDHALEVSEANDPQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
TAAPAIDTDTAAQNSNPPAAEASETPPAEDLDWNSRFFTRLNALAVDGEDSTWLMPEPEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCCEEECCCCCC
PTVPPEATLEAENPTPTPSPRLEIVVDSLWDEQLEVQSPEEVPETTPETASEFPEPEMPL
CCCCCCCEEECCCCCCCCCCCEEEEEEHHCCCHHCCCCCHHCCCCCCHHHHHCCCCCCCC
APETQTNPPPLPVPEPQLHLDKTAYQVADLAVVELSLPAGGDRLHGQLWLQDRQTRELLA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCCCCCCCEEEECCHHHHHHHC
GPFQLMTFTPGPEGRLYCRQVVSIPPGALALRFEAIALDPHSQQESRKVSQDCQVLPTAA
CCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCEEEECCC
TNGDWPALESGESW
CCCCCCCCCCCCCC
>Mature Secondary Structure
MVHWQFLLQKKGDRNWDILQTETLSLAPGEYRLAARGDAQVEIHCEICFPQGQRSQRTDV
CCCEEEEHCCCCCCCCCEEEEEEEEECCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCC
TTDQGLFAIMPLQHLGAGKWVIICRSLEVTNPWEKRLMLQVTQPTFKPLPLPPNPNVFSF
CCCCCEEEEECHHHCCCCCEEEEEEECCCCCHHHHEEEEEECCCCCCCCCCCCCCCEEEE
ETTFSLADSHPKTADQPTQKTSDDIPPPREETAATPVMNSLADADQSAANHETLEELAGV
EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
DEAPTLLETSETSTPPASPEPDEEEHATALLEDSLTALDELLREELEPIWAEMDQVAQAQ
CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAAPPAPPTLDIPPAPLPYQIVLAQTVYPWDTTHAPELRGEIQPNPAAGDRQPISEPGT
HCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCE
LTFTLRDPQTATVVTTLTAAIALDDFPCAFSQTITIDGSLTTLLLVGEITLHIGAGALLA
EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEEEEECCCHHHH
QQTFSLMADYGAIASQLQATAPPKPDSPAPTTPTPKPLKLPTPEAVAPSPQPQSQQTPTI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPPKLKAKSQKSTTGLQLPNFTPKATVSDVPPSDQTEPTDEAPVSSSDHALEVSEANDPQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
TAAPAIDTDTAAQNSNPPAAEASETPPAEDLDWNSRFFTRLNALAVDGEDSTWLMPEPEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCCEEECCCCCC
PTVPPEATLEAENPTPTPSPRLEIVVDSLWDEQLEVQSPEEVPETTPETASEFPEPEMPL
CCCCCCCEEECCCCCCCCCCCEEEEEEHHCCCHHCCCCCHHCCCCCCHHHHHCCCCCCCC
APETQTNPPPLPVPEPQLHLDKTAYQVADLAVVELSLPAGGDRLHGQLWLQDRQTRELLA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCCCCCCCEEEECCHHHHHHHC
GPFQLMTFTPGPEGRLYCRQVVSIPPGALALRFEAIALDPHSQQESRKVSQDCQVLPTAA
CCEEEEEECCCCCCCHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCEEEECCC
TNGDWPALESGESW
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA