Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078859

Identifier: 170078859

GI number: 170078859

Start: 2343652

End: 2344158

Strand: Reverse

Name: 170078859

Synonym: SYNPCC7002_A2263

Alternate gene names: NA

Gene position: 2344158-2343652 (Counterclockwise)

Preceding gene: 170078861

Following gene: 170078858

Centisome position: 77.93

GC content: 50.69

Gene sequence:

>507_bases
ATGATTGAAATGCACGTTGCTGGCATTGCCCTTGATGCCATTACTCGGAGCCCGATCATTCTCCTGAAAGATGCCTCGGA
ACGGCGTGCTTTACCGATCTATATTGCCCAGGATCAAGCCCGCTCAATTATGAATGTCTTGGAGCAAAAAACACCGCCAC
GGCCCCTCACCCATGATCTCTTTGCGGATCTATTGGAAGCTTGGGATCTCACCCTCGATAAAATTATTATCCATGCCCTA
GAAGAACACACTTTCTATGCGGTGCTTTGTACCTCCCAGGGGGAAGAAACCCAAGAAATTGACTGTCGCCCCAGTGATGC
GATCGCCATTGCCCTGCGCACCGAAAGTCCGATTTGGGTCGTCGAAGAAGTGATTTCTGAGGCTTCAATTCCCGTAGACC
GCGATGCTGACGAAGAAGAACGGCAAGCCTTCCGCGCCTTTGTCGATCAGATTAGCCCCGAAGATTTAATCCGCCACAGC
CAATCCGCCAATCCAGAAGAAAGCTAA

Upstream 100 bases:

>100_bases
AGGCCCAACATCCCCCCAGAATATCGAAGCTGTAGGATACTAGTTAGTAAGGGAATCAAATATTGCTCCCGTTGCCATCC
CTACCCCGAGGCCCAGATCC

Downstream 100 bases:

>100_bases
GGCATTGGGGGTTAAAGCCGGATGACGATTTTTGTCTACAGCTACAGTGACCCACTCCTGGATGCCGCCCCAGAACCGGA
ACTTTGGGGGGTTGAGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MIEMHVAGIALDAITRSPIILLKDASERRALPIYIAQDQARSIMNVLEQKTPPRPLTHDLFADLLEAWDLTLDKIIIHAL
EEHTFYAVLCTSQGEETQEIDCRPSDAIAIALRTESPIWVVEEVISEASIPVDRDADEEERQAFRAFVDQISPEDLIRHS
QSANPEES

Sequences:

>Translated_168_residues
MIEMHVAGIALDAITRSPIILLKDASERRALPIYIAQDQARSIMNVLEQKTPPRPLTHDLFADLLEAWDLTLDKIIIHAL
EEHTFYAVLCTSQGEETQEIDCRPSDAIAIALRTESPIWVVEEVISEASIPVDRDADEEERQAFRAFVDQISPEDLIRHS
QSANPEES
>Mature_168_residues
MIEMHVAGIALDAITRSPIILLKDASERRALPIYIAQDQARSIMNVLEQKTPPRPLTHDLFADLLEAWDLTLDKIIIHAL
EEHTFYAVLCTSQGEETQEIDCRPSDAIAIALRTESPIWVVEEVISEASIPVDRDADEEERQAFRAFVDQISPEDLIRHS
QSANPEES

Specific function: Unknown

COG id: COG1259

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003729 [H]

Pfam domain/function: PF02577 DUF151 [H]

EC number: NA

Molecular weight: Translated: 18942; Mature: 18942

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMHVAGIALDAITRSPIILLKDASERRALPIYIAQDQARSIMNVLEQKTPPRPLTHDL
CCEEEEHHHHHHHHCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHH
FADLLEAWDLTLDKIIIHALEEHTFYAVLCTSQGEETQEIDCRPSDAIAIALRTESPIWV
HHHHHHHHCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHH
VEEVISEASIPVDRDADEEERQAFRAFVDQISPEDLIRHSQSANPEES
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIEMHVAGIALDAITRSPIILLKDASERRALPIYIAQDQARSIMNVLEQKTPPRPLTHDL
CCEEEEHHHHHHHHCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHH
FADLLEAWDLTLDKIIIHALEEHTFYAVLCTSQGEETQEIDCRPSDAIAIALRTESPIWV
HHHHHHHHCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHH
VEEVISEASIPVDRDADEEERQAFRAFVDQISPEDLIRHSQSANPEES
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]