| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078861
Identifier: 170078861
GI number: 170078861
Start: 2344998
End: 2345948
Strand: Reverse
Name: 170078861
Synonym: SYNPCC7002_A2265
Alternate gene names: NA
Gene position: 2345948-2344998 (Counterclockwise)
Preceding gene: 170078862
Following gene: 170078859
Centisome position: 77.99
GC content: 45.53
Gene sequence:
>951_bases GTGCGCAAACCCTGGTTAGAACTTCCCTTGGCGATTTTTTCCTTTGGCTTTTATAAAGTCAACAAATTTCTGATTGGGAA TCTCTACACTTTGTATTTAGCGCTGAATAAAAAAAATGCTAAGGAATGGCGCATTATTGGAGAAAAATCCCTCCAGAAAT TCCTGAGTTTACCCGTTTTAATGACCAAAGCGCCCCGGTGGAATACCCACGCCATTATCGGCACCCTGGGACCACTCTCT GTAGAAAAAGAACTCACCATTAACCTCGAAACGATTCGTCAATCCACGGAAGCTTGGGTCGGTTGCATCTATGACTTTCC GGGCTATCGCACGGTGTTAAATTTCACGCAACTCACCGATGACCCCAACCAAACAGAACTCAAAATTTTCTTACCTAAAG GGAAATATACCGTCGGGTTACGTTACTACCATCCCAAGGTAAATCCTCGCTTTCCGGTCGTTAAAACAGATCTAAATCTA ACCGTGCCGACTTTGGTTGTTTCGCCCCAAAACAACGACTTTTATCAAGCCCTGGCCCAGAAAACAAACCTTTATTTTCG TCTGCTTCACTACTACATTTTTACGCTATTTAAATTTCGCGATGTCTTACCCGCTGCTTTTGTGAAAGGAGAATTCCTCC CTGTCGGCGCCACCGATACTCAATTTTTTTACGGCGCTTTAGAAGCAGCAGAAAACTTAGAGATTACCATCCCAGCCCCC TGGCTTCAGACCTTTGATTTTTATCTCACCTTCTATAACCGCGCCAGTTTTCCCCTACGTTGGCAAAAAATCACCGAAGC GATGATCTGTGATCCCCTGGGAGAAAAAGGCTATTACCTAATTCGGATGCGGCCCCGTACTCAGGACGCCGAGGCACAAT TACCAACGGTTAGAGGAGAAGAAACCCAGGTCACGCCCCAGCAGAAAAAACTGGCGATCCAGTCCCTATAA
Upstream 100 bases:
>100_bases TGGCATTTTTCCTATGGGGATCAGCTCTGGGCCTGGCAAACCCAAAGGGCGATCGCCCACTACGGTAGAATTTAAAACAT AATTTTTTTGATGAATAATA
Downstream 100 bases:
>100_bases ATAGCCATGTTCCTGGAGGAAGTCGAGGCCAATGTCAGGGGCTTTTTGTTCCCGTTGGTAACTGACAAATCGCTGGACAT ATTTCGCGAGGATATCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MRKPWLELPLAIFSFGFYKVNKFLIGNLYTLYLALNKKNAKEWRIIGEKSLQKFLSLPVLMTKAPRWNTHAIIGTLGPLS VEKELTINLETIRQSTEAWVGCIYDFPGYRTVLNFTQLTDDPNQTELKIFLPKGKYTVGLRYYHPKVNPRFPVVKTDLNL TVPTLVVSPQNNDFYQALAQKTNLYFRLLHYYIFTLFKFRDVLPAAFVKGEFLPVGATDTQFFYGALEAAENLEITIPAP WLQTFDFYLTFYNRASFPLRWQKITEAMICDPLGEKGYYLIRMRPRTQDAEAQLPTVRGEETQVTPQQKKLAIQSL
Sequences:
>Translated_316_residues MRKPWLELPLAIFSFGFYKVNKFLIGNLYTLYLALNKKNAKEWRIIGEKSLQKFLSLPVLMTKAPRWNTHAIIGTLGPLS VEKELTINLETIRQSTEAWVGCIYDFPGYRTVLNFTQLTDDPNQTELKIFLPKGKYTVGLRYYHPKVNPRFPVVKTDLNL TVPTLVVSPQNNDFYQALAQKTNLYFRLLHYYIFTLFKFRDVLPAAFVKGEFLPVGATDTQFFYGALEAAENLEITIPAP WLQTFDFYLTFYNRASFPLRWQKITEAMICDPLGEKGYYLIRMRPRTQDAEAQLPTVRGEETQVTPQQKKLAIQSL >Mature_316_residues MRKPWLELPLAIFSFGFYKVNKFLIGNLYTLYLALNKKNAKEWRIIGEKSLQKFLSLPVLMTKAPRWNTHAIIGTLGPLS VEKELTINLETIRQSTEAWVGCIYDFPGYRTVLNFTQLTDDPNQTELKIFLPKGKYTVGLRYYHPKVNPRFPVVKTDLNL TVPTLVVSPQNNDFYQALAQKTNLYFRLLHYYIFTLFKFRDVLPAAFVKGEFLPVGATDTQFFYGALEAAENLEITIPAP WLQTFDFYLTFYNRASFPLRWQKITEAMICDPLGEKGYYLIRMRPRTQDAEAQLPTVRGEETQVTPQQKKLAIQSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36649; Mature: 36649
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKPWLELPLAIFSFGFYKVNKFLIGNLYTLYLALNKKNAKEWRIIGEKSLQKFLSLPVL CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEECHHHHHHHHCCCCE MTKAPRWNTHAIIGTLGPLSVEKELTINLETIRQSTEAWVGCIYDFPGYRTVLNFTQLTD EECCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHEEEEECCCCHHHEEEHHHHCC DPNQTELKIFLPKGKYTVGLRYYHPKVNPRFPVVKTDLNLTVPTLVVSPQNNDFYQALAQ CCCCCEEEEEEECCCEEEEEEEECCCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHH KTNLYFRLLHYYIFTLFKFRDVLPAAFVKGEFLPVGATDTQFFYGALEAAENLEITIPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCEEEECCH WLQTFDFYLTFYNRASFPLRWQKITEAMICDPLGEKGYYLIRMRPRTQDAEAQLPTVRGE HHHHHHEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC ETQVTPQQKKLAIQSL CCCCCCHHHHHHCCCC >Mature Secondary Structure MRKPWLELPLAIFSFGFYKVNKFLIGNLYTLYLALNKKNAKEWRIIGEKSLQKFLSLPVL CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCEEEECHHHHHHHHCCCCE MTKAPRWNTHAIIGTLGPLSVEKELTINLETIRQSTEAWVGCIYDFPGYRTVLNFTQLTD EECCCCCCCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHEEEEECCCCHHHEEEHHHHCC DPNQTELKIFLPKGKYTVGLRYYHPKVNPRFPVVKTDLNLTVPTLVVSPQNNDFYQALAQ CCCCCEEEEEEECCCEEEEEEEECCCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHH KTNLYFRLLHYYIFTLFKFRDVLPAAFVKGEFLPVGATDTQFFYGALEAAENLEITIPAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCEEEECCH WLQTFDFYLTFYNRASFPLRWQKITEAMICDPLGEKGYYLIRMRPRTQDAEAQLPTVRGE HHHHHHEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC ETQVTPQQKKLAIQSL CCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA