| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078853
Identifier: 170078853
GI number: 170078853
Start: 2339642
End: 2340400
Strand: Reverse
Name: 170078853
Synonym: SYNPCC7002_A2257
Alternate gene names: NA
Gene position: 2340400-2339642 (Counterclockwise)
Preceding gene: 170078854
Following gene: 170078852
Centisome position: 77.8
GC content: 50.72
Gene sequence:
>759_bases GTGAAATTTCTGGGGGTTGATTTTGGTTGGACGTCCGGTGCCAGTGGTTTGTGTTGTTTAGAAATACAAGATCAGCAATT GGCGATCGCCCAGTTTGATCTGCTTCTTGATCCCGCCGAAATTGTCACTTGGGTTGATCAACTGCTCCCGAAAGAAACAA TGGGCCTCGTTGCGGTGGATGCGCCGACGATTATCCCCAACGAAACGGGAACGCGCCTGCCAGATCGCCTCACCCACAAA TATTTTGGGAAATACCACGCGGGTTGTTATCCAGCGAATTTAAACCGTCCCTTTGCGCCCCGCACCACCCAATTGGGCTT GGATCTTGAAGCCTTAGGCTTTGGCCATGCCCCGGAAATTGACGCTCGAAAACCGGGCCGTTACCAGATTGAGGTGTTTC CCCACCCGGCGATGGTGCGTCTATTTCAGCTAGAGCGAATCATCAAATACAAAAAAGGAAAGTTAGGCGATCGCCGCCAG GAATTACAACGTTTGGTGGGTCTAATTGAAACAGTGTTGACGACTCTTACCCCGCAATTGAGCTTAAATCATCTCTGGGA CGATCTCGTTCAACCGATCCCAACAGCCAAAGGCAGTGATCTCAAAGAAATCGAAGACCGCATCGATGCCTTAGTTTGTG CCTATGTGGGAGCCTACTGGTGGTACTGGGGCCAGGCGAAAAACCAAACCCTTGGCGATCACCACTCCGGTTACATTATC GTCCCAGCACCTGTTACGATGGGTGATCAGCAATCATAA
Upstream 100 bases:
>100_bases CCGGGCCGTGCTGCTAGATGCAACGGTGGATCAAGTAAATTTCCACAACGCGATTTTTGATGGGACAATTCTCCCCGAAG GTCTTGATGTGGGTAATTAA
Downstream 100 bases:
>100_bases ATTGTGAATTTTTAAGATAAAAAATTACGTTCCCTTACAAAAGTTTCTATTGATATGACAGTAACGGCTGAAGCTCCTCC CCAAGAAAAAGTAAAACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVDAPTIIPNETGTRLPDRLTHK YFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEIDARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQ ELQRLVGLIETVLTTLTPQLSLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII VPAPVTMGDQQS
Sequences:
>Translated_252_residues MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVDAPTIIPNETGTRLPDRLTHK YFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEIDARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQ ELQRLVGLIETVLTTLTPQLSLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII VPAPVTMGDQQS >Mature_252_residues MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVDAPTIIPNETGTRLPDRLTHK YFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEIDARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQ ELQRLVGLIETVLTTLTPQLSLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII VPAPVTMGDQQS
Specific function: Unknown
COG id: COG4328
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28264; Mature: 28264
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVD CCEEEECCCCCCCCCCEEEEEECCCEEEHHHHHHHCCHHHHHHHHHHHCCHHHCCEEEEC APTIIPNETGTRLPDRLTHKYFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEI CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCC DARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQELQRLVGLIETVLTTLTPQL CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEE VPAPVTMGDQQS ECCCCCCCCCCC >Mature Secondary Structure MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVD CCEEEECCCCCCCCCCEEEEEECCCEEEHHHHHHHCCHHHHHHHHHHHCCHHHCCEEEEC APTIIPNETGTRLPDRLTHKYFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEI CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCC DARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQELQRLVGLIETVLTTLTPQL CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEE VPAPVTMGDQQS ECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA