Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078853

Identifier: 170078853

GI number: 170078853

Start: 2339642

End: 2340400

Strand: Reverse

Name: 170078853

Synonym: SYNPCC7002_A2257

Alternate gene names: NA

Gene position: 2340400-2339642 (Counterclockwise)

Preceding gene: 170078854

Following gene: 170078852

Centisome position: 77.8

GC content: 50.72

Gene sequence:

>759_bases
GTGAAATTTCTGGGGGTTGATTTTGGTTGGACGTCCGGTGCCAGTGGTTTGTGTTGTTTAGAAATACAAGATCAGCAATT
GGCGATCGCCCAGTTTGATCTGCTTCTTGATCCCGCCGAAATTGTCACTTGGGTTGATCAACTGCTCCCGAAAGAAACAA
TGGGCCTCGTTGCGGTGGATGCGCCGACGATTATCCCCAACGAAACGGGAACGCGCCTGCCAGATCGCCTCACCCACAAA
TATTTTGGGAAATACCACGCGGGTTGTTATCCAGCGAATTTAAACCGTCCCTTTGCGCCCCGCACCACCCAATTGGGCTT
GGATCTTGAAGCCTTAGGCTTTGGCCATGCCCCGGAAATTGACGCTCGAAAACCGGGCCGTTACCAGATTGAGGTGTTTC
CCCACCCGGCGATGGTGCGTCTATTTCAGCTAGAGCGAATCATCAAATACAAAAAAGGAAAGTTAGGCGATCGCCGCCAG
GAATTACAACGTTTGGTGGGTCTAATTGAAACAGTGTTGACGACTCTTACCCCGCAATTGAGCTTAAATCATCTCTGGGA
CGATCTCGTTCAACCGATCCCAACAGCCAAAGGCAGTGATCTCAAAGAAATCGAAGACCGCATCGATGCCTTAGTTTGTG
CCTATGTGGGAGCCTACTGGTGGTACTGGGGCCAGGCGAAAAACCAAACCCTTGGCGATCACCACTCCGGTTACATTATC
GTCCCAGCACCTGTTACGATGGGTGATCAGCAATCATAA

Upstream 100 bases:

>100_bases
CCGGGCCGTGCTGCTAGATGCAACGGTGGATCAAGTAAATTTCCACAACGCGATTTTTGATGGGACAATTCTCCCCGAAG
GTCTTGATGTGGGTAATTAA

Downstream 100 bases:

>100_bases
ATTGTGAATTTTTAAGATAAAAAATTACGTTCCCTTACAAAAGTTTCTATTGATATGACAGTAACGGCTGAAGCTCCTCC
CCAAGAAAAAGTAAAACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVDAPTIIPNETGTRLPDRLTHK
YFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEIDARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQ
ELQRLVGLIETVLTTLTPQLSLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII
VPAPVTMGDQQS

Sequences:

>Translated_252_residues
MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVDAPTIIPNETGTRLPDRLTHK
YFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEIDARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQ
ELQRLVGLIETVLTTLTPQLSLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII
VPAPVTMGDQQS
>Mature_252_residues
MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVDAPTIIPNETGTRLPDRLTHK
YFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEIDARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQ
ELQRLVGLIETVLTTLTPQLSLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII
VPAPVTMGDQQS

Specific function: Unknown

COG id: COG4328

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28264; Mature: 28264

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVD
CCEEEECCCCCCCCCCEEEEEECCCEEEHHHHHHHCCHHHHHHHHHHHCCHHHCCEEEEC
APTIIPNETGTRLPDRLTHKYFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEI
CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCC
DARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQELQRLVGLIETVLTTLTPQL
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEE
VPAPVTMGDQQS
ECCCCCCCCCCC
>Mature Secondary Structure
MKFLGVDFGWTSGASGLCCLEIQDQQLAIAQFDLLLDPAEIVTWVDQLLPKETMGLVAVD
CCEEEECCCCCCCCCCEEEEEECCCEEEHHHHHHHCCHHHHHHHHHHHCCHHHCCEEEEC
APTIIPNETGTRLPDRLTHKYFGKYHAGCYPANLNRPFAPRTTQLGLDLEALGFGHAPEI
CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCC
DARKPGRYQIEVFPHPAMVRLFQLERIIKYKKGKLGDRRQELQRLVGLIETVLTTLTPQL
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SLNHLWDDLVQPIPTAKGSDLKEIEDRIDALVCAYVGAYWWYWGQAKNQTLGDHHSGYII
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEE
VPAPVTMGDQQS
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA