| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078843
Identifier: 170078843
GI number: 170078843
Start: 2329496
End: 2329873
Strand: Reverse
Name: 170078843
Synonym: SYNPCC7002_A2247
Alternate gene names: NA
Gene position: 2329873-2329496 (Counterclockwise)
Preceding gene: 170078850
Following gene: 170078842
Centisome position: 77.45
GC content: 42.33
Gene sequence:
>378_bases ATGTTACGCCAAGGCGATCGCCTTTTGGTCATCCACGAAAAATCAAGGGTTTCAGGCACATTTTGTTTACGGTTCTTTAC ATTTATGCGCCCTTGCAGTGTGGATCTTGAGTTCAAAAAGAGAATTCCCCAGACCAATGCTAAGCCCCAAGAAAATCGTT TTGAGCTGTGGAAAACCTGGGGAAAGTTGTGGAAAAAAATGAAACAGATTGGGGAAACCATGGGGAATCATTGGGGGAAT TTTTGCGGGAAAAATAAGAATTGCAAATTTGTGAGGAAAGATGAATTTTGTCAGGATTTTTGTTTAAATTTGAGAATTAA AATATCCTCCGGTACTCCCCTTCCCCATGCACAATCGCCACCCCCAAGCCGTTGCTAG
Upstream 100 bases:
>100_bases ATTTCAGAACTGCTGAAAAATAGTCTTGGCGTTTTGTTCGGTTTCGTCTGTCGTCGCCCTATTGTTGTCTATGGAGGGGT GGGTTTGTCAATATTGCAAA
Downstream 100 bases:
>100_bases TTCGAATTCTGTGACCCCCCAAAAGCTTGATGTGCGCGCCTGTGGCATCAACAAAAACCATTGGTATGTGGCGGCTCGCA GTGCCGAGTTAACGGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MLRQGDRLLVIHEKSRVSGTFCLRFFTFMRPCSVDLEFKKRIPQTNAKPQENRFELWKTWGKLWKKMKQIGETMGNHWGN FCGKNKNCKFVRKDEFCQDFCLNLRIKISSGTPLPHAQSPPPSRC
Sequences:
>Translated_125_residues MLRQGDRLLVIHEKSRVSGTFCLRFFTFMRPCSVDLEFKKRIPQTNAKPQENRFELWKTWGKLWKKMKQIGETMGNHWGN FCGKNKNCKFVRKDEFCQDFCLNLRIKISSGTPLPHAQSPPPSRC >Mature_125_residues MLRQGDRLLVIHEKSRVSGTFCLRFFTFMRPCSVDLEFKKRIPQTNAKPQENRFELWKTWGKLWKKMKQIGETMGNHWGN FCGKNKNCKFVRKDEFCQDFCLNLRIKISSGTPLPHAQSPPPSRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14737; Mature: 14737
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQGDRLLVIHEKSRVSGTFCLRFFTFMRPCSVDLEFKKRIPQTNAKPQENRFELWKTW CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH GKLWKKMKQIGETMGNHWGNFCGKNKNCKFVRKDEFCQDFCLNLRIKISSGTPLPHAQSP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHEEEEEECCCCCCCCCCCC PPSRC CCCCC >Mature Secondary Structure MLRQGDRLLVIHEKSRVSGTFCLRFFTFMRPCSVDLEFKKRIPQTNAKPQENRFELWKTW CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHH GKLWKKMKQIGETMGNHWGNFCGKNKNCKFVRKDEFCQDFCLNLRIKISSGTPLPHAQSP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHEEEEEECCCCCCCCCCCC PPSRC CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA