| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is cruH [H]
Identifier: 170078842
GI number: 170078842
Start: 2328424
End: 2329527
Strand: Reverse
Name: cruH [H]
Synonym: SYNPCC7002_A2246
Alternate gene names: 170078842
Gene position: 2329527-2328424 (Counterclockwise)
Preceding gene: 170078843
Following gene: 170078840
Centisome position: 77.44
GC content: 50.91
Gene sequence:
>1104_bases ATGCACAATCGCCACCCCCAAGCCGTTGCTAGTTCGAATTCTGTGACCCCCCAAAAGCTTGATGTGCGCGCCTGTGGCAT CAACAAAAACCATTGGTATGTGGCGGCTCGCAGTGCCGAGTTAACGGATCAGCCCTTGGGTTTTACCCTCTGGAATGAAG ATTTTGTGCTCTACCGGGATCAAGCCGGTCAAGTCCAAGCCCTCGAAGACCGCTGTCCCCACCGCCAAGTGAAACTCAGT TCTGGCCAAGTGGTTGGGGATAACTTGGAATGTGCCTACCATGGCTGGCAGTTTGATGCGTCTGGAACCTGTGCCCATGT GCCCTATCTCGCGGAAAATCAAAAACGGCCTGCTTGTAAGATTCGCACCCTCCCCGTGCGGGAACAGGATGGTTTTATTT GGGTTTTTCCGGGGGATCCCGAACGTTTAACCGACGAAGCCATTCAACCGTTGCCGATTCCAGAATGGGAGCATTTAAAC TACATCGTCAGCGTCACAACCATTGACTGTGAGGGACATTTTTCCTATCTCATTGAAAACTTGATGGATATGTACCACGG TCACCTCCACGACAATTACCAAGCGTGGGCCTCGGCAAAGTTAGAGGATATCCAGGTGACTGAGCAGCGGGTAGATGCCC ACTACGAAGCCCAGAGCTATTACAAAATTGATAAGATTTGGTCGATCTCCCAATTGTTTTTTCCGGCCCTGCGCAAGCTG CACCCGGAACCGTTGGATGTGAGCTATGTTTACCCCAACTGGAGCGCGACTTTGGGGAATGATTTTAAGATTATGTGCTT GTTTTGTCCGACCCACAGCAGCCGCACCCGTGCTTATCTATTGCATTTCACTTCCCTCAATGCCTTTTGGCGACTCCATA AGCTACCTGTGCCGTTTCGCCGTTGGGTAAAGGATCTCTGTTTCAATGCGGCAAAGGGGTTACTCGACGGCCTTGTGGAA CAGGATGTGTTGATGATCGAGCAGGAGCAAAGGGCTTATCTGGAAAATCCCCAACGCCAAAATGTAGAACTGAACCGAGC ATTGATGGCGGTGCAACGATTGATTAAACAACAGGCGATCGCCCAAGATCAGACCAGTGCTTAA
Upstream 100 bases:
>100_bases GGGAAAAATAAGAATTGCAAATTTGTGAGGAAAGATGAATTTTGTCAGGATTTTTGTTTAAATTTGAGAATTAAAATATC CTCCGGTACTCCCCTTCCCC
Downstream 100 bases:
>100_bases TTCAAGTGCTTAACTCAGTAGCTGGCGACGTTTTTGCTCAAATTCATATTCGGTGATCAAACCTTCCACCCGGAGTTTTT CGAGTTCCCGGAGCGCTTCG
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MHNRHPQAVASSNSVTPQKLDVRACGINKNHWYVAARSAELTDQPLGFTLWNEDFVLYRDQAGQVQALEDRCPHRQVKLS SGQVVGDNLECAYHGWQFDASGTCAHVPYLAENQKRPACKIRTLPVREQDGFIWVFPGDPERLTDEAIQPLPIPEWEHLN YIVSVTTIDCEGHFSYLIENLMDMYHGHLHDNYQAWASAKLEDIQVTEQRVDAHYEAQSYYKIDKIWSISQLFFPALRKL HPEPLDVSYVYPNWSATLGNDFKIMCLFCPTHSSRTRAYLLHFTSLNAFWRLHKLPVPFRRWVKDLCFNAAKGLLDGLVE QDVLMIEQEQRAYLENPQRQNVELNRALMAVQRLIKQQAIAQDQTSA
Sequences:
>Translated_367_residues MHNRHPQAVASSNSVTPQKLDVRACGINKNHWYVAARSAELTDQPLGFTLWNEDFVLYRDQAGQVQALEDRCPHRQVKLS SGQVVGDNLECAYHGWQFDASGTCAHVPYLAENQKRPACKIRTLPVREQDGFIWVFPGDPERLTDEAIQPLPIPEWEHLN YIVSVTTIDCEGHFSYLIENLMDMYHGHLHDNYQAWASAKLEDIQVTEQRVDAHYEAQSYYKIDKIWSISQLFFPALRKL HPEPLDVSYVYPNWSATLGNDFKIMCLFCPTHSSRTRAYLLHFTSLNAFWRLHKLPVPFRRWVKDLCFNAAKGLLDGLVE QDVLMIEQEQRAYLENPQRQNVELNRALMAVQRLIKQQAIAQDQTSA >Mature_367_residues MHNRHPQAVASSNSVTPQKLDVRACGINKNHWYVAARSAELTDQPLGFTLWNEDFVLYRDQAGQVQALEDRCPHRQVKLS SGQVVGDNLECAYHGWQFDASGTCAHVPYLAENQKRPACKIRTLPVREQDGFIWVFPGDPERLTDEAIQPLPIPEWEHLN YIVSVTTIDCEGHFSYLIENLMDMYHGHLHDNYQAWASAKLEDIQVTEQRVDAHYEAQSYYKIDKIWSISQLFFPALRKL HPEPLDVSYVYPNWSATLGNDFKIMCLFCPTHSSRTRAYLLHFTSLNAFWRLHKLPVPFRRWVKDLCFNAAKGLLDGLVE QDVLMIEQEQRAYLENPQRQNVELNRALMAVQRLIKQQAIAQDQTSA
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.14.13.82 [H]
Molecular weight: Translated: 42406; Mature: 42406
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNRHPQAVASSNSVTPQKLDVRACGINKNHWYVAARSAELTDQPLGFTLWNEDFVLYRD CCCCCCCHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEEC QAGQVQALEDRCPHRQVKLSSGQVVGDNLECAYHGWQFDASGTCAHVPYLAENQKRPACK CCCCEEEHHHCCCCCEEEECCCCEECCCCEEEEECEEECCCCCEEECCCHHCCCCCCCEE IRTLPVREQDGFIWVFPGDPERLTDEAIQPLPIPEWEHLNYIVSVTTIDCEGHFSYLIEN EEEECCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHH LMDMYHGHLHDNYQAWASAKLEDIQVTEQRVDAHYEAQSYYKIDKIWSISQLFFPALRKL HHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCHHHEEEHHHHHHHHHHHHHHHHHC HPEPLDVSYVYPNWSATLGNDFKIMCLFCPTHSSRTRAYLLHFTSLNAFWRLHKLPVPFR CCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECHHHHHHHHCCCCCHH RWVKDLCFNAAKGLLDGLVEQDVLMIEQEQRAYLENPQRQNVELNRALMAVQRLIKQQAI HHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AQDQTSA HCCCCCC >Mature Secondary Structure MHNRHPQAVASSNSVTPQKLDVRACGINKNHWYVAARSAELTDQPLGFTLWNEDFVLYRD CCCCCCCHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEEC QAGQVQALEDRCPHRQVKLSSGQVVGDNLECAYHGWQFDASGTCAHVPYLAENQKRPACK CCCCEEEHHHCCCCCEEEECCCCEECCCCEEEEECEEECCCCCEEECCCHHCCCCCCCEE IRTLPVREQDGFIWVFPGDPERLTDEAIQPLPIPEWEHLNYIVSVTTIDCEGHFSYLIEN EEEECCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHH LMDMYHGHLHDNYQAWASAKLEDIQVTEQRVDAHYEAQSYYKIDKIWSISQLFFPALRKL HHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCHHHEEEHHHHHHHHHHHHHHHHHC HPEPLDVSYVYPNWSATLGNDFKIMCLFCPTHSSRTRAYLLHFTSLNAFWRLHKLPVPFR CCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECHHHHHHHHCCCCCHH RWVKDLCFNAAKGLLDGLVEQDVLMIEQEQRAYLENPQRQNVELNRALMAVQRLIKQQAI HHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AQDQTSA HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9098058 [H]