Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is gpm

Identifier: 170078830

GI number: 170078830

Start: 2319434

End: 2321011

Strand: Direct

Name: gpm

Synonym: SYNPCC7002_A2233

Alternate gene names: 170078830

Gene position: 2319434-2321011 (Clockwise)

Preceding gene: 170078829

Following gene: 170078831

Centisome position: 77.11

GC content: 50.82

Gene sequence:

>1578_bases
ATGGCGAACGCACCTGTATCCCCAGTGGTGCTCGTAATCTTAGATGGCTGGGGCTACCGTCAAGAAGCTAACGCAAATGC
CATTGCGGCTGCCAATACACCAAATGTCGATGCCTTTTTCGCTACATACCCTTCGACATTAATCCATACATCCGGAAAAA
GGGTGGGGCTGCCAGATGGCCAAATGGGGAATTCTGAAGTCGGTCACTTAAACCTTGGAGCAGGACGTGTCGTCCCCCAG
GAACTGGTGCGTATTTCCGATGCCATTGAAGACGGTTCCTTCCTCCGCAATGACGTCCTCGTTAAAGTTTGCCGAGAAAC
CCGCCAAGCCGGAAAAAAATTACACCTTATCGGTCTTTGCTCAGATGGTGGTGTCCACTCCCATCTCAATCATCTCCTCG
GTTTGTTAGACCTAGCCAAGGTTAACGGCATTGCCGATGTCCATATCCATGCCATTACCGACGGGCGCGACACCAATACC
ACCGAAGGGATTAATTACCTCCAACAGATCCAAGCGCACATCGATAAATTTGGGGTCGGCTCGATCTCGACGATCAGTGG
CCGCTACTTTGCCATGGATCGCGATCGCCGCTGGGATCGCGTCAAGCAAGCCTATGACGTGATGACCCAAAACGGTAATC
TCGACCAACGTTCCTTCGCCGAGATTCTCCAAAGCCACTATGACAACGGTGTAACCGATGAATTTATCCCACCTGTGCGT
CTTAAAGAAGGTGCCATTGAACCAGGCGATGGGGTGATTTTCTACAATTTCCGACCCGACCGTGCCCGCCAACTCTCCTA
TGCCTTGGTAGACAAGAATTTCCAAGGGTTTGAGCGGGAACTGATTCCGGATCTCAATTTTGTCACCTTTACTCAATACG
ACGCCAACCTGCCTGTACAGGTCGCCTTTGCGCCCCAAAACCTGACGAAAATCCTTGGGGAAGTGATTGCGGACAATGGC
CTGAAGCAATTCCGCACCGCAGAAACAGAAAAATATCCCCATGTTACTTATTTCTTTAATGGTGGCTTAGAAGTTGCCTT
CGAAGGAGAAGACCGAGAGTTAATTTCTAGCCCCCAGGTGGCGACCTACGACCAAAAGCCAGAAATGTCCGCTAAGGCAG
TGACGGATGCTGCCTGCCAAGCCATCGAAAAAGGTATTTATAGTCTGGTGGTGATTAACTATGCCAATCCGGACATGGTT
GGTCATACTGGAAAACTCGAAGCGGCGGTACAGGCCATTGAGACCGTTGATCATTGTTTAGGCCGTTTGGTGGCAACCAT
CGGCAAAATGGGCGGCACGACATTAATCACCGCTGATCACGGCAATGCAGAATATATGGCCGATCAAAATGGGAAGTCTT
GGACAGCGCACACAACTAACCCTGTGCCCTTTATCTTGATTGAAGGGGAACGCCGTAAGGTAGTTGGCCATGGTGCTGAT
GTGGTGTTGCGGGAAAATGGCTGTTTAGCAGATGTCGCCCCGACGATCCTCGATATTCTTGGCATTGATAAACCACAGGA
AATGACGGGTCAGTCTCTCATTGCTCCGGCCCCCTATGCCGTGACCCGACGTCGATAA

Upstream 100 bases:

>100_bases
CATTATTAATTTTCGGGAATGATAGTCTAAATTACAGAAAGTGATATTATCGATTTGCATTCCCCCGTACAGACACCCAC
AATAGAGGAAAGAATTCATC

Downstream 100 bases:

>100_bases
ATCGGTTATCCTAAAGTTTCCCCGCTGAAATCAAACATTTATTCGTTCGTCATTGATCTATGTTGGAATCTATTTTGCAA
ATTGTGTGGATGGTCTCCGC

Product: phosphoglyceromutase

Products: NA

Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MANAPVSPVVLVILDGWGYRQEANANAIAAANTPNVDAFFATYPSTLIHTSGKRVGLPDGQMGNSEVGHLNLGAGRVVPQ
ELVRISDAIEDGSFLRNDVLVKVCRETRQAGKKLHLIGLCSDGGVHSHLNHLLGLLDLAKVNGIADVHIHAITDGRDTNT
TEGINYLQQIQAHIDKFGVGSISTISGRYFAMDRDRRWDRVKQAYDVMTQNGNLDQRSFAEILQSHYDNGVTDEFIPPVR
LKEGAIEPGDGVIFYNFRPDRARQLSYALVDKNFQGFERELIPDLNFVTFTQYDANLPVQVAFAPQNLTKILGEVIADNG
LKQFRTAETEKYPHVTYFFNGGLEVAFEGEDRELISSPQVATYDQKPEMSAKAVTDAACQAIEKGIYSLVVINYANPDMV
GHTGKLEAAVQAIETVDHCLGRLVATIGKMGGTTLITADHGNAEYMADQNGKSWTAHTTNPVPFILIEGERRKVVGHGAD
VVLRENGCLADVAPTILDILGIDKPQEMTGQSLIAPAPYAVTRRR

Sequences:

>Translated_525_residues
MANAPVSPVVLVILDGWGYRQEANANAIAAANTPNVDAFFATYPSTLIHTSGKRVGLPDGQMGNSEVGHLNLGAGRVVPQ
ELVRISDAIEDGSFLRNDVLVKVCRETRQAGKKLHLIGLCSDGGVHSHLNHLLGLLDLAKVNGIADVHIHAITDGRDTNT
TEGINYLQQIQAHIDKFGVGSISTISGRYFAMDRDRRWDRVKQAYDVMTQNGNLDQRSFAEILQSHYDNGVTDEFIPPVR
LKEGAIEPGDGVIFYNFRPDRARQLSYALVDKNFQGFERELIPDLNFVTFTQYDANLPVQVAFAPQNLTKILGEVIADNG
LKQFRTAETEKYPHVTYFFNGGLEVAFEGEDRELISSPQVATYDQKPEMSAKAVTDAACQAIEKGIYSLVVINYANPDMV
GHTGKLEAAVQAIETVDHCLGRLVATIGKMGGTTLITADHGNAEYMADQNGKSWTAHTTNPVPFILIEGERRKVVGHGAD
VVLRENGCLADVAPTILDILGIDKPQEMTGQSLIAPAPYAVTRRR
>Mature_524_residues
ANAPVSPVVLVILDGWGYRQEANANAIAAANTPNVDAFFATYPSTLIHTSGKRVGLPDGQMGNSEVGHLNLGAGRVVPQE
LVRISDAIEDGSFLRNDVLVKVCRETRQAGKKLHLIGLCSDGGVHSHLNHLLGLLDLAKVNGIADVHIHAITDGRDTNTT
EGINYLQQIQAHIDKFGVGSISTISGRYFAMDRDRRWDRVKQAYDVMTQNGNLDQRSFAEILQSHYDNGVTDEFIPPVRL
KEGAIEPGDGVIFYNFRPDRARQLSYALVDKNFQGFERELIPDLNFVTFTQYDANLPVQVAFAPQNLTKILGEVIADNGL
KQFRTAETEKYPHVTYFFNGGLEVAFEGEDRELISSPQVATYDQKPEMSAKAVTDAACQAIEKGIYSLVVINYANPDMVG
HTGKLEAAVQAIETVDHCLGRLVATIGKMGGTTLITADHGNAEYMADQNGKSWTAHTTNPVPFILIEGERRKVVGHGADV
VLRENGCLADVAPTILDILGIDKPQEMTGQSLIAPAPYAVTRRR

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate

COG id: COG0696

COG function: function code G; Phosphoglyceromutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family

Homologues:

Organism=Escherichia coli, GI1790041, Length=515, Percent_Identity=46.6019417475728, Blast_Score=483, Evalue=1e-137,
Organism=Caenorhabditis elegans, GI32564249, Length=523, Percent_Identity=41.8738049713193, Blast_Score=412, Evalue=1e-115,
Organism=Caenorhabditis elegans, GI17507741, Length=523, Percent_Identity=41.8738049713193, Blast_Score=411, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GPMI_SYNP2 (B1XJ47)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001735468.1
- ProteinModelPortal:   B1XJ47
- SMR:   B1XJ47
- GeneID:   6057145
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A2233
- HOGENOM:   HBG613255
- OMA:   DHGNAEL
- ProtClustDB:   PRK05434
- GO:   GO:0005737
- GO:   GO:0006096
- HAMAP:   MF_01038
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR011258
- InterPro:   IPR006124
- InterPro:   IPR005995
- Gene3D:   G3DSA:3.40.720.10
- Gene3D:   G3DSA:3.40.1450.10
- PIRSF:   PIRSF001492
- TIGRFAMs:   TIGR01307

Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core; SSF64158 BPG-indep_PGM_N

EC number: =5.4.2.1

Molecular weight: Translated: 57362; Mature: 57230

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: ACT_SITE 65-65

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANAPVSPVVLVILDGWGYRQEANANAIAAANTPNVDAFFATYPSTLIHTSGKRVGLPDG
CCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEECCCCEECCCCC
QMGNSEVGHLNLGAGRVVPQELVRISDAIEDGSFLRNDVLVKVCRETRQAGKKLHLIGLC
CCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE
SDGGVHSHLNHLLGLLDLAKVNGIADVHIHAITDGRDTNTTEGINYLQQIQAHIDKFGVG
CCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
SISTISGRYFAMDRDRRWDRVKQAYDVMTQNGNLDQRSFAEILQSHYDNGVTDEFIPPVR
CEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCE
LKEGAIEPGDGVIFYNFRPDRARQLSYALVDKNFQGFERELIPDLNFVTFTQYDANLPVQ
ECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCCCCEE
VAFAPQNLTKILGEVIADNGLKQFRTAETEKYPHVTYFFNGGLEVAFEGEDRELISSPQV
EEECCHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCEEEEEECCCHHHHCCCCE
ATYDQKPEMSAKAVTDAACQAIEKGIYSLVVINYANPDMVGHTGKLEAAVQAIETVDHCL
EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
GRLVATIGKMGGTTLITADHGNAEYMADQNGKSWTAHTTNPVPFILIEGERRKVVGHGAD
HHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCE
VVLRENGCLADVAPTILDILGIDKPQEMTGQSLIAPAPYAVTRRR
EEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCEECCCCCHHCCCC
>Mature Secondary Structure 
ANAPVSPVVLVILDGWGYRQEANANAIAAANTPNVDAFFATYPSTLIHTSGKRVGLPDG
CCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEECCCCEECCCCC
QMGNSEVGHLNLGAGRVVPQELVRISDAIEDGSFLRNDVLVKVCRETRQAGKKLHLIGLC
CCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE
SDGGVHSHLNHLLGLLDLAKVNGIADVHIHAITDGRDTNTTEGINYLQQIQAHIDKFGVG
CCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
SISTISGRYFAMDRDRRWDRVKQAYDVMTQNGNLDQRSFAEILQSHYDNGVTDEFIPPVR
CEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCE
LKEGAIEPGDGVIFYNFRPDRARQLSYALVDKNFQGFERELIPDLNFVTFTQYDANLPVQ
ECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCCCCEE
VAFAPQNLTKILGEVIADNGLKQFRTAETEKYPHVTYFFNGGLEVAFEGEDRELISSPQV
EEECCHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCEEEEEECCCHHHHCCCCE
ATYDQKPEMSAKAVTDAACQAIEKGIYSLVVINYANPDMVGHTGKLEAAVQAIETVDHCL
EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
GRLVATIGKMGGTTLITADHGNAEYMADQNGKSWTAHTTNPVPFILIEGERRKVVGHGAD
HHHHHHHHCCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCE
VVLRENGCLADVAPTILDILGIDKPQEMTGQSLIAPAPYAVTRRR
EEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCEECCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA