Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078829

Identifier: 170078829

GI number: 170078829

Start: 2317735

End: 2319276

Strand: Direct

Name: 170078829

Synonym: SYNPCC7002_A2232

Alternate gene names: NA

Gene position: 2317735-2319276 (Clockwise)

Preceding gene: 170078828

Following gene: 170078830

Centisome position: 77.05

GC content: 53.31

Gene sequence:

>1542_bases
ATGTTTCCACAGCAACGATTTTCACGATATTTCATTTGGTTAGGCTTGGCTCTGGTGGTCGCGGGCGCTGTCGTCCTGGG
GGCCACGGGAGAAGGCTTCGCCTATGGCTTGATTCTGGTTGGGTTATTGTTGTTGGGTTGGGGGATCAGTCATTTTCCAG
GTTTGGGAACGGGGCTGCAACGGTTCTGGCGCAAGCGATCTACCCAGATGGGGACGAATGGGGTTGTCGGGGCGATCGCC
ATTTTGCTGATTTTTTGTCTGACAAATTTTTTAGCTGTCCAGCTCCCCCTCCGAATTGATCTCACAGAAAACCAAATCCA
CACCCTCTCTAGCCAAACCCAAGGGGTGCTGCAAAATTTATCTCAACCTTTAACCCTGTGGCTCTTCCAGGAAACGGACG
ATGCGAATTTAAAGCCCTTTTTAGACAATTATCAACGGCTCAATCCTAATAATTTTCGCTACGTTTTTGTCGATCCAGAC
CGTAATCTTGACGCGGTACAGCGATTCCAGGTCGAGAGTCGCGGCGAAGTTCACCTTGAGTATGGCGATAAAACCCAACT
GCTGAAAGTGCTAGCCCAGGGGGAACCCCTCACAGAAAGTCAACTAACCAATGGCATTCTGCAAATCCAAGGCGATCGCC
AACCCCACTTCTACGTCCTCCAAGGCCACGGCGAACCGCCCCTCGATCAAATTCCCGGAGGGCTAGGGCAAATGGCCCAA
CTTTTGGCTACCCAAGGTTATGCAGTCTCTCCTTTAAATTTCACCCAAACGCCTACGATTCCCCCAGATGCCGATCTGAT
TGCAGTCATTGGCCCCCAAACGCCATTTCTCCCAGGGGAAGTTGCCCTCTTGGAAACTGCCCTTGCGAATAACCAAAGTC
TCCTCCTTCTGCTTGATCCCCAAACGGATCCCCAGTTAAATTCGCTCCTGGACAAGTGGGGCCTCAGCCTCGATCAACGG
CTTATTCTCGACCAAGGAAACCGGGCGGACTTCCTCGGTTTAGGACAATCGACCCTTGTCCTCAATCAATACGGCGACCA
TCCGATCACCACGGCCCTTGCTGGACAAAACTCTATCTATCAAGCGGTGCGCCCCATTTTCAGCGACACCACAGAGGCGA
TCGCCGCCACCGCAATCCTCCGTACCGATGACCAGGCCTGGGCCGAAAGCCAACCCGAAATCCCGGATCCGACCTTTGAC
CCCCCAGGCGATCGCCCCGGCCCCCTGACCTTTGGCTGGGCCCTGGAAAAAATAGATTCCCAAGCTACAATGAAGGCAAC
TCGCCTTGTGGCAATTGGTAACACCACCTTTGTGACCAATGGTTGGCTAGAACAATACCTAAACAGCGACCTCTTGCTCA
ATACCGTGAATTGGCTGGCCCAAACGGAAGAGGCGCCCCTCGCAATCCAACCAAGAACCCCCCAAGAGCGACGTCTAAAT
CTCCGTCGTTGGCAAATTGCAACCCTTGCCTGGTTTGCCCCCATCCTATTTCCCCTTGGTGGTTTAGGCGGCGCAATCTT
TTGCCTTTGGCGACGCCGTTAG

Upstream 100 bases:

>100_bases
TCAGCTATAGCATTCTGGGGGTTGTCCTCACGGCCCAATCCATTGAAGCTTTGCGCTGGACACGGCGTTGATGGTTTCTC
GATATTGTTAACAGAGCATC

Downstream 100 bases:

>100_bases
AAAAATATGTGAGATGACCGATAAATTTACGTAAACTTTGAGAAAACAACATTAAAACATTATTAATTTTCGGGAATGAT
AGTCTAAATTACAGAAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MFPQQRFSRYFIWLGLALVVAGAVVLGATGEGFAYGLILVGLLLLGWGISHFPGLGTGLQRFWRKRSTQMGTNGVVGAIA
ILLIFCLTNFLAVQLPLRIDLTENQIHTLSSQTQGVLQNLSQPLTLWLFQETDDANLKPFLDNYQRLNPNNFRYVFVDPD
RNLDAVQRFQVESRGEVHLEYGDKTQLLKVLAQGEPLTESQLTNGILQIQGDRQPHFYVLQGHGEPPLDQIPGGLGQMAQ
LLATQGYAVSPLNFTQTPTIPPDADLIAVIGPQTPFLPGEVALLETALANNQSLLLLLDPQTDPQLNSLLDKWGLSLDQR
LILDQGNRADFLGLGQSTLVLNQYGDHPITTALAGQNSIYQAVRPIFSDTTEAIAATAILRTDDQAWAESQPEIPDPTFD
PPGDRPGPLTFGWALEKIDSQATMKATRLVAIGNTTFVTNGWLEQYLNSDLLLNTVNWLAQTEEAPLAIQPRTPQERRLN
LRRWQIATLAWFAPILFPLGGLGGAIFCLWRRR

Sequences:

>Translated_513_residues
MFPQQRFSRYFIWLGLALVVAGAVVLGATGEGFAYGLILVGLLLLGWGISHFPGLGTGLQRFWRKRSTQMGTNGVVGAIA
ILLIFCLTNFLAVQLPLRIDLTENQIHTLSSQTQGVLQNLSQPLTLWLFQETDDANLKPFLDNYQRLNPNNFRYVFVDPD
RNLDAVQRFQVESRGEVHLEYGDKTQLLKVLAQGEPLTESQLTNGILQIQGDRQPHFYVLQGHGEPPLDQIPGGLGQMAQ
LLATQGYAVSPLNFTQTPTIPPDADLIAVIGPQTPFLPGEVALLETALANNQSLLLLLDPQTDPQLNSLLDKWGLSLDQR
LILDQGNRADFLGLGQSTLVLNQYGDHPITTALAGQNSIYQAVRPIFSDTTEAIAATAILRTDDQAWAESQPEIPDPTFD
PPGDRPGPLTFGWALEKIDSQATMKATRLVAIGNTTFVTNGWLEQYLNSDLLLNTVNWLAQTEEAPLAIQPRTPQERRLN
LRRWQIATLAWFAPILFPLGGLGGAIFCLWRRR
>Mature_513_residues
MFPQQRFSRYFIWLGLALVVAGAVVLGATGEGFAYGLILVGLLLLGWGISHFPGLGTGLQRFWRKRSTQMGTNGVVGAIA
ILLIFCLTNFLAVQLPLRIDLTENQIHTLSSQTQGVLQNLSQPLTLWLFQETDDANLKPFLDNYQRLNPNNFRYVFVDPD
RNLDAVQRFQVESRGEVHLEYGDKTQLLKVLAQGEPLTESQLTNGILQIQGDRQPHFYVLQGHGEPPLDQIPGGLGQMAQ
LLATQGYAVSPLNFTQTPTIPPDADLIAVIGPQTPFLPGEVALLETALANNQSLLLLLDPQTDPQLNSLLDKWGLSLDQR
LILDQGNRADFLGLGQSTLVLNQYGDHPITTALAGQNSIYQAVRPIFSDTTEAIAATAILRTDDQAWAESQPEIPDPTFD
PPGDRPGPLTFGWALEKIDSQATMKATRLVAIGNTTFVTNGWLEQYLNSDLLLNTVNWLAQTEEAPLAIQPRTPQERRLN
LRRWQIATLAWFAPILFPLGGLGGAIFCLWRRR

Specific function: Unknown

COG id: COG3225

COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56742; Mature: 56742

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPQQRFSRYFIWLGLALVVAGAVVLGATGEGFAYGLILVGLLLLGWGISHFPGLGTGLQ
CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHH
RFWRKRSTQMGTNGVVGAIAILLIFCLTNFLAVQLPLRIDLTENQIHTLSSQTQGVLQNL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHC
SQPLTLWLFQETDDANLKPFLDNYQRLNPNNFRYVFVDPDRNLDAVQRFQVESRGEVHLE
CCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEE
YGDKTQLLKVLAQGEPLTESQLTNGILQIQGDRQPHFYVLQGHGEPPLDQIPGGLGQMAQ
ECCHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCEEEEECCCCCCHHHCCCCHHHHHH
LLATQGYAVSPLNFTQTPTIPPDADLIAVIGPQTPFLPGEVALLETALANNQSLLLLLDP
HHHCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECC
QTDPQLNSLLDKWGLSLDQRLILDQGNRADFLGLGQSTLVLNQYGDHPITTALAGQNSIY
CCCHHHHHHHHHHCCCCCCCCEECCCCCCCEEECCCCEEEEECCCCCCCEEECCCCHHHH
QAVRPIFSDTTEAIAATAILRTDDQAWAESQPEIPDPTFDPPGDRPGPLTFGWALEKIDS
HHHHHHHCCHHHHHHHHHHEECCCHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCC
QATMKATRLVAIGNTTFVTNGWLEQYLNSDLLLNTVNWLAQTEEAPLAIQPRTPQERRLN
HHHHHHEEEEEECCCEEEECHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCCC
LRRWQIATLAWFAPILFPLGGLGGAIFCLWRRR
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure
MFPQQRFSRYFIWLGLALVVAGAVVLGATGEGFAYGLILVGLLLLGWGISHFPGLGTGLQ
CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHH
RFWRKRSTQMGTNGVVGAIAILLIFCLTNFLAVQLPLRIDLTENQIHTLSSQTQGVLQNL
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHC
SQPLTLWLFQETDDANLKPFLDNYQRLNPNNFRYVFVDPDRNLDAVQRFQVESRGEVHLE
CCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEE
YGDKTQLLKVLAQGEPLTESQLTNGILQIQGDRQPHFYVLQGHGEPPLDQIPGGLGQMAQ
ECCHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCEEEEECCCCCCHHHCCCCHHHHHH
LLATQGYAVSPLNFTQTPTIPPDADLIAVIGPQTPFLPGEVALLETALANNQSLLLLLDP
HHHCCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECC
QTDPQLNSLLDKWGLSLDQRLILDQGNRADFLGLGQSTLVLNQYGDHPITTALAGQNSIY
CCCHHHHHHHHHHCCCCCCCCEECCCCCCCEEECCCCEEEEECCCCCCCEEECCCCHHHH
QAVRPIFSDTTEAIAATAILRTDDQAWAESQPEIPDPTFDPPGDRPGPLTFGWALEKIDS
HHHHHHHCCHHHHHHHHHHEECCCHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCC
QATMKATRLVAIGNTTFVTNGWLEQYLNSDLLLNTVNWLAQTEEAPLAIQPRTPQERRLN
HHHHHHEEEEEECCCEEEECHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHCCC
LRRWQIATLAWFAPILFPLGGLGGAIFCLWRRR
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA