| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078828
Identifier: 170078828
GI number: 170078828
Start: 2316914
End: 2317705
Strand: Direct
Name: 170078828
Synonym: SYNPCC7002_A2231
Alternate gene names: NA
Gene position: 2316914-2317705 (Clockwise)
Preceding gene: 170078827
Following gene: 170078829
Centisome position: 77.02
GC content: 50.63
Gene sequence:
>792_bases ATGCTGAATAACATTGTGGCGATTTTTCGCCGGGAACTACAGAGCTACTTCACCGCTCCCCTCGCCTATATTTTTGCAAC GTTGTTGTGGTTTTTGGGAGGATTTTTCTTCCTAACGCTCCTGATCGGCCCCCAGGGCATTGTCACCTTTGTCGCCACCC AAGAACAGATGGGCGTTGCCTTACCTCCCATTGATGTAGCCACAGAATTTCTCCAGGCTTTTTGGGGCATCCTGGGCATT TTAGTCTTGTTTCTGTTGCCGTTGCTCTCCATGGGTCTCTATGCTGAAGAACGCAAACAGGGCACTTTGGAACTTTTAGC GACTTCCCCGGTGACGAACTGGGCGGTGGCAGTGGGCAAATTGTTGGGAGTCGTGACTTTTTTTTCGGTACTGTTCCTGC CCATGGTGCTGTGGGAACTGATTGTCTTAGTGAATGCAGCCCCAGCTTTTCCCCTCAGTCTTTTTCTTTTAGCGCATTTG GGCTTGTTGCTCTTGGTGGCCGCTATTTTATCTTTGGGGATGTTCGTGTCGTCTCTCACAGACAGTTCCCTGATTGCGGC GGTCTTGACCTTTACCCTAGTGCTGATGTTGTGGCTGTTGGATATGCTGGGCGATCGCCTGTCGGGGCCGTTGGGCAATG GCCTCAAACATTTCTCTTTACTGAAGCATTACAACAATTTCCTCGAGGGAATTTTCGATAGCAGTAGCCTGGTCTTACTC CTCAGCTATAGCATTCTGGGGGTTGTCCTCACGGCCCAATCCATTGAAGCTTTGCGCTGGACACGGCGTTGA
Upstream 100 bases:
>100_bases CTCTATGAAATGCAACGACTGCGCCCCAGCCTTGAGGACGTTTTTTTAGAATTATTAGACGCTGAGGCGAACGATCCGAT GTCTGAACAACTCCATGCTG
Downstream 100 bases:
>100_bases TGGTTTCTCGATATTGTTAACAGAGCATCATGTTTCCACAGCAACGATTTTCACGATATTTCATTTGGTTAGGCTTGGCT CTGGTGGTCGCGGGCGCTGT
Product: ABC transporter family protein
Products: NA
Alternate protein names: ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease Protein; ABC-2 Type Transport System Permease; ABC Transporter Permease; ABC Transporter Permease Protein; ABC-2 Type Transporter Permease; Permease Protein Of ABC Transporter; ABC Transporter Family Protein
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLNNIVAIFRRELQSYFTAPLAYIFATLLWFLGGFFFLTLLIGPQGIVTFVATQEQMGVALPPIDVATEFLQAFWGILGI LVLFLLPLLSMGLYAEERKQGTLELLATSPVTNWAVAVGKLLGVVTFFSVLFLPMVLWELIVLVNAAPAFPLSLFLLAHL GLLLLVAAILSLGMFVSSLTDSSLIAAVLTFTLVLMLWLLDMLGDRLSGPLGNGLKHFSLLKHYNNFLEGIFDSSSLVLL LSYSILGVVLTAQSIEALRWTRR
Sequences:
>Translated_263_residues MLNNIVAIFRRELQSYFTAPLAYIFATLLWFLGGFFFLTLLIGPQGIVTFVATQEQMGVALPPIDVATEFLQAFWGILGI LVLFLLPLLSMGLYAEERKQGTLELLATSPVTNWAVAVGKLLGVVTFFSVLFLPMVLWELIVLVNAAPAFPLSLFLLAHL GLLLLVAAILSLGMFVSSLTDSSLIAAVLTFTLVLMLWLLDMLGDRLSGPLGNGLKHFSLLKHYNNFLEGIFDSSSLVLL LSYSILGVVLTAQSIEALRWTRR >Mature_263_residues MLNNIVAIFRRELQSYFTAPLAYIFATLLWFLGGFFFLTLLIGPQGIVTFVATQEQMGVALPPIDVATEFLQAFWGILGI LVLFLLPLLSMGLYAEERKQGTLELLATSPVTNWAVAVGKLLGVVTFFSVLFLPMVLWELIVLVNAAPAFPLSLFLLAHL GLLLLVAAILSLGMFVSSLTDSSLIAAVLTFTLVLMLWLLDMLGDRLSGPLGNGLKHFSLLKHYNNFLEGIFDSSSLVLL LSYSILGVVLTAQSIEALRWTRR
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28895; Mature: 28895
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNNIVAIFRRELQSYFTAPLAYIFATLLWFLGGFFFLTLLIGPQGIVTFVATQEQMGVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCC LPPIDVATEFLQAFWGILGILVLFLLPLLSMGLYAEERKQGTLELLATSPVTNWAVAVGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH LLGVVTFFSVLFLPMVLWELIVLVNAAPAFPLSLFLLAHLGLLLLVAAILSLGMFVSSLT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DSSLIAAVLTFTLVLMLWLLDMLGDRLSGPLGNGLKHFSLLKHYNNFLEGIFDSSSLVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH LSYSILGVVLTAQSIEALRWTRR HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLNNIVAIFRRELQSYFTAPLAYIFATLLWFLGGFFFLTLLIGPQGIVTFVATQEQMGVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHCCCC LPPIDVATEFLQAFWGILGILVLFLLPLLSMGLYAEERKQGTLELLATSPVTNWAVAVGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH LLGVVTFFSVLFLPMVLWELIVLVNAAPAFPLSLFLLAHLGLLLLVAAILSLGMFVSSLT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DSSLIAAVLTFTLVLMLWLLDMLGDRLSGPLGNGLKHFSLLKHYNNFLEGIFDSSSLVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH LSYSILGVVLTAQSIEALRWTRR HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA