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The map label for this gene is pcyA [H]

Identifier: 170078825

GI number: 170078825

Start: 2314836

End: 2315567

Strand: Reverse

Name: pcyA [H]

Synonym: SYNPCC7002_A2228

Alternate gene names: 170078825

Gene position: 2315567-2314836 (Counterclockwise)

Preceding gene: 170078834

Following gene: 170078819

Centisome position: 76.98

GC content: 49.59

Gene sequence:

>732_bases
ATGACTGCCCCTGCAACCAAGCCAAAATTTTATCCCCTCATCGAACAGCTCGCTGGTGTCATCCTCGAAACCTGGCATCA
ACACTTAGAGCTAGAACCCTTTACCCTGCCGGAAGGCCTCGGCTACATCGAAGGGAAATTAGAAGGGGAACGGCTCACCA
TCGAAAATACCTGCTACCAGAGCCAGCACTTCCGTAAAATGCACCTGGAAATGGCAAAAGTGGGCGAAAACCTCGATATT
CTCCATTGTGTGATGTTTCCTCGCGCGGAATATGCCCTACCAATGTTTGGCTGTGATTTAGTCGGTAATCCCCGTGGTGT
GAGTGCGGCGATCGCCGATTTATCTCCGACCAGCGCCGATAAAACTTTGTCTGTAGATTACCAAACACGACTACGACAAA
ATCAAGGCAACTTAAACTTTTCCCAGCCCCGTGATCTCCCAGAATGGGGCGCAATTTTTTCGGAATTTTGCCTCTTTATT
CGTCCCAGCAATCCCAACGAAGAACAGCAGTTTTTGGAACGGGTGCGGGAATTTCTGACGATTCATTGTCAGTTGGCCTT
GGGTTTAGAAAAGCTTTCTCCCGCTGAGCAGGCCATTTATTTGGCGGGACAACGCCACTATTGCCAAGAACAGCAGCGGA
ATGACAAAACGCGCCGTGTTTTAGAAAAGGCCTTTAACCCCGACTGGGCCGAGCGCTATATGAGTCAGGTGCTGTTTGAT
ATTCCAGCCTAG

Upstream 100 bases:

>100_bases
TATCTTTGGTTCTAAATTCTGGGTCTAGGTCACCGCTCGCGTCACCTACAGGGATCTAGAACATTGTTTTAAACCACCTT
TTAAGATTGCTTTTTCGCCC

Downstream 100 bases:

>100_bases
ATCGCGAACAAAGCTTTAATTACCGCAGCAACGGTCAATGCCCAGGCTATCAAGGATCAAATCACTCACGGCATTGGCCA
CCGCAAATTCGCCATAAAAC

Product: phycocyanobilin:ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTAPATKPKFYPLIEQLAGVILETWHQHLELEPFTLPEGLGYIEGKLEGERLTIENTCYQSQHFRKMHLEMAKVGENLDI
LHCVMFPRAEYALPMFGCDLVGNPRGVSAAIADLSPTSADKTLSVDYQTRLRQNQGNLNFSQPRDLPEWGAIFSEFCLFI
RPSNPNEEQQFLERVREFLTIHCQLALGLEKLSPAEQAIYLAGQRHYCQEQQRNDKTRRVLEKAFNPDWAERYMSQVLFD
IPA

Sequences:

>Translated_243_residues
MTAPATKPKFYPLIEQLAGVILETWHQHLELEPFTLPEGLGYIEGKLEGERLTIENTCYQSQHFRKMHLEMAKVGENLDI
LHCVMFPRAEYALPMFGCDLVGNPRGVSAAIADLSPTSADKTLSVDYQTRLRQNQGNLNFSQPRDLPEWGAIFSEFCLFI
RPSNPNEEQQFLERVREFLTIHCQLALGLEKLSPAEQAIYLAGQRHYCQEQQRNDKTRRVLEKAFNPDWAERYMSQVLFD
IPA
>Mature_242_residues
TAPATKPKFYPLIEQLAGVILETWHQHLELEPFTLPEGLGYIEGKLEGERLTIENTCYQSQHFRKMHLEMAKVGENLDIL
HCVMFPRAEYALPMFGCDLVGNPRGVSAAIADLSPTSADKTLSVDYQTRLRQNQGNLNFSQPRDLPEWGAIFSEFCLFIR
PSNPNEEQQFLERVREFLTIHCQLALGLEKLSPAEQAIYLAGQRHYCQEQQRNDKTRRVLEKAFNPDWAERYMSQVLFDI
PA

Specific function: Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HY2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009249
- InterPro:   IPR022870 [H]

Pfam domain/function: PF05996 Fe_bilin_red [H]

EC number: =1.3.7.5 [H]

Molecular weight: Translated: 27959; Mature: 27828

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPATKPKFYPLIEQLAGVILETWHQHLELEPFTLPEGLGYIEGKLEGERLTIENTCYQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCEECCCEEEEHHHHHH
SQHFRKMHLEMAKVGENLDILHCVMFPRAEYALPMFGCDLVGNPRGVSAAIADLSPTSAD
HHHHHHHHHHHHHCCCCCCEEHEECCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
KTLSVDYQTRLRQNQGNLNFSQPRDLPEWGAIFSEFCLFIRPSNPNEEQQFLERVREFLT
CEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHH
IHCQLALGLEKLSPAEQAIYLAGQRHYCQEQQRNDKTRRVLEKAFNPDWAERYMSQVLFD
HHHHHHHCHHHCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
IPA
CCC
>Mature Secondary Structure 
TAPATKPKFYPLIEQLAGVILETWHQHLELEPFTLPEGLGYIEGKLEGERLTIENTCYQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCEECCCEEEEHHHHHH
SQHFRKMHLEMAKVGENLDILHCVMFPRAEYALPMFGCDLVGNPRGVSAAIADLSPTSAD
HHHHHHHHHHHHHCCCCCCEEHEECCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
KTLSVDYQTRLRQNQGNLNFSQPRDLPEWGAIFSEFCLFIRPSNPNEEQQFLERVREFLT
CEEECHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHH
IHCQLALGLEKLSPAEQAIYLAGQRHYCQEQQRNDKTRRVLEKAFNPDWAERYMSQVLFD
HHHHHHHCHHHCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHH
IPA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA