Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078823

Identifier: 170078823

GI number: 170078823

Start: 2312583

End: 2314253

Strand: Direct

Name: 170078823

Synonym: SYNPCC7002_A2225

Alternate gene names: NA

Gene position: 2312583-2314253 (Clockwise)

Preceding gene: 170078822

Following gene: 170078824

Centisome position: 76.88

GC content: 52.18

Gene sequence:

>1671_bases
ATGGATAGAATCCTCAACCCCCTCGGTGATTGGAATCCCCAACTTTTTCGGGAATTAAAAGGCCGCTTCACCCGTAAAAA
TGTGGCGATCTCCTTTGGTCTTGCTTGCTTTACCCAATGCCTGCTTTATCTTTTCTACCTGGGAGAATTGCCAAATGCCC
TGGTTGATCAACCCTACAACCGTTACTGTACCGGGCCGGAAGATGACTACTGGCGGTCTACCTATCAATGTTTGAGGGAT
GGCAACGACTGGCTGATCAACTGGCAGTTATGGCATTTAGATGTGTTCATGGCTCTGACTCTGGTGGGCCTGGGGATTCT
CCTGGTGGTTGGTACTCATTTAATTGGGGCCGATGTCGCGAAGGAAGAACAACGGGGCACCCTGGGTTTTGTGCGCCTCA
GTCCCCAACCCGTCTCAAAAATTTTGCTCGGGAAACTGTTGGGAGTGCCTAGCCTGATTTATGTTGGTTTAGTTTTTGTC
CTGCCCTGGCACCTGTGGCTCGGTTTTCAAGGTGGCATTGCTCTGGGTTGGCTAATGGTGCTTTATGGGGTGGCGATCGC
CGCTAGTTTCACTGCCTTTACGGGGGTGGTTCTATGGAGTTTCGTGGGTCGTGAACTGTTGGGGGGCTTCCACACCTGGC
TCTACAGTGGTGGCCTCGGCCTCTATCTTTTTGGGATGTCTGTGGCTTGCTTTGAGGATAATTTTCCCAGCTATACCCCC
TTTGATTGGGTGCGGCTGTTCTATCCGGGCAATATCTTTTATTACCTCGTCGACCAAAATTCCCTCGCCCCGGAAACCAT
CGGTTATTTTTCACCCCACAACTGGTTTCAGACCCAATGGTACGGCTCTTCCCTTTGGGTGGGGGGCCTTGGGTTTATGG
CGATCCATTATGCTCTTTTAGGGGCCTTGGCTTGGCAAGGGATTCGGCGGCGTTTTTATGATCCCCAGGCCACGATGATC
ACGAAGGCCATGGGCTGCGGGGTCGCCGTTAGCAGCACGATTTTTATGACTGGGTTTGTTTGGGCTGGCGATCGCCCCGA
ACGTCTTTTTGCCAATTTTCAAACCCTGCAAGGCTTCTATTGGATGGTAATGTTGGGGCTAATTCTTCTGTTAACACCGA
CCCGGCAACGGATACAAGATTGGGCGAGATTTCGACATCAAAATACTTCTCACCGACGGTTTAAATGGGCCTTTTTCAGA
AATGATCGCTCTCCGGCCCTAGGGGCGATCGCCTTGATGTTGCTCCTCACCACGGGCTACCAAATGACCATTGTCCTCTT
GTCCCCCCTGCCCAGCCAAAAACTGCTGGTGATCGCAGCTCTAGGACTCCAGGGAGGTTGCCTTTTCCTTCTGGCCGTTT
TAACCCAATGGATCTTTCTCCGTCGTCAAAAACAACGGGCCATTTGGTTTGGCGTTGCCGTCATCGGGTCTAGTGTTGTC
CCTTTTATCCTCTTCATGGTCTTCCATGGACGCTTTACCTTGCCCATTACCTTCGGCCTCTTTTCGGCGTTTCCCCTCAG
TGCCGTTGCCATGGCGGTGCCCAGTATGGTGATCTGGAGTGCGATCGCCCAGTGGGGCATGATTCTCGGTTGTCTTTGGG
GACTGCAACAACAGATCCAACGCCTCGGACAATCCGACCTGAAAACTTTTCAGCCGACCCCTACCGAATGA

Upstream 100 bases:

>100_bases
GCAAACCCTGACCCCAGCGGGTTAATTCCTAAATTACATAAAGTCTCGTCGGTCGAAAATGCTTCTCCTTTGCTAAGAAC
CATAATCCCAGGTATCAACC

Downstream 100 bases:

>100_bases
TCTAAAACATGTTATTCTTGTATTCCTGTATGGGCACGTGGCTCAGTGGATAGAGCATCAGATTCCGGTTCTGAGGGTCG
GGGGTTCGAATCCCTCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYNRYCTGPEDDYWRSTYQCLRD
GNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVAKEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFV
LPWHLWLGFQGGIALGWLMVLYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP
FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALLGALAWQGIRRRFYDPQATMI
TKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFYWMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFR
NDRSPALGAIALMLLLTTGYQMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV
PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQRLGQSDLKTFQPTPTE

Sequences:

>Translated_556_residues
MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYNRYCTGPEDDYWRSTYQCLRD
GNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVAKEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFV
LPWHLWLGFQGGIALGWLMVLYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP
FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALLGALAWQGIRRRFYDPQATMI
TKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFYWMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFR
NDRSPALGAIALMLLLTTGYQMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV
PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQRLGQSDLKTFQPTPTE
>Mature_556_residues
MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYNRYCTGPEDDYWRSTYQCLRD
GNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVAKEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFV
LPWHLWLGFQGGIALGWLMVLYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP
FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALLGALAWQGIRRRFYDPQATMI
TKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFYWMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFR
NDRSPALGAIALMLLLTTGYQMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV
PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQRLGQSDLKTFQPTPTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62957; Mature: 62957

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
RYCTGPEDDYWRSTYQCLRDGNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVA
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFVLPWHLWLGFQGGIALGWLMV
HHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCC
FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALL
HHHEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHH
GALAWQGIRRRFYDPQATMITKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFY
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
WMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFRNDRSPALGAIALMLLLTTGY
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC
QMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV
EEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQ
HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGQSDLKTFQPTPTE
HHCHHHHCCCCCCCCC
>Mature Secondary Structure
MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
RYCTGPEDDYWRSTYQCLRDGNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVA
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFVLPWHLWLGFQGGIALGWLMV
HHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCC
FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALL
HHHEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHH
GALAWQGIRRRFYDPQATMITKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFY
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
WMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFRNDRSPALGAIALMLLLTTGY
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC
QMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV
EEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQ
HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGQSDLKTFQPTPTE
HHCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA