| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078822
Identifier: 170078822
GI number: 170078822
Start: 2310813
End: 2312507
Strand: Direct
Name: 170078822
Synonym: SYNPCC7002_A2224
Alternate gene names: NA
Gene position: 2310813-2312507 (Clockwise)
Preceding gene: 170078821
Following gene: 170078823
Centisome position: 76.82
GC content: 50.86
Gene sequence:
>1695_bases ATGGTTTTTCATCAATGGCTAGACCGCATCGGTGACTGGAATCCTCAGCTTTTTCGGGAGCTAAAAGGCCGACTGTCTAA AAAAGCCCTCGGTTTAGTGGCGATCGCCTCTTTGTTCACGCAGGGAATATTTTATTTAAGTCTGAGAATCGCCCTCCCCA GTGCTGGGATTAGCACCACCAACCATTACTGCATCGGTCGCGCCCCGGCAGACTTTGATCCCAATAGCCATTTGATCCAT AGCCAAAACTTTTGTGTGGCTGATGCGGCGGGAAATTTAAACCTAAATTGGCCCCTGTGGTGGACTGACCTATTTATTAC CCTCAGTGTGGTGGGATTTTTCGTGGCGCTGTTGGGGGGCGTTTACTTACTAATCCAAGATTTGGGCAAAGAGCAAAAGG CAGGCACTTTGAACTTCGTCAAATTGAGTCCCCAGTCGGCCCAGGCGATCGCCATTGGCAAGATTTTAGGGGTTCCCAGT CTCATTTATGTCGGCCTGGCCTTGGTTTTGCCCTTACACTTTTGGGCCGGACTCAGGGGCGGCATTCCGTTGCCATTAAT CCTGCTTTTCTACGGTGTGATCACAGCTAGTTACGGCTTTTTCTATAGTGGTGCGGCGCTCTATAGTTTGGTGAATCCAA CCCAACCGGCCCTGAAAGCTTGGTTAGCGACGGGGGGACTTTTTTACTTGATGATGGGGAGCACGACGTTTCTCCTCCAG GAAAATAGCCACGTCGGCAATCTCATGGATGGCGTCAATTTGTTTAATCCGCTGCATATGTTGGTGTATTTGGGTCAAGC CAGTGCCGCTGCGGAACAACTGCTCACGTTTAACTACGACAGCCTCGCCGATGTTTCCTTTTTCCGGGTTTATCTTTGGG AGAATGGGGCGATCGCCGGTTTGATTTATCTGTTGCTTTATGGAATGGGGATCTACTGGTTTCTCCAAGCGTTCCGCCGG AAATTTCATTATCTCAATGGCACCCTCCTTAGCAAGAAACAGAGTTATGGTCTAACGGCGTTGCTCACCATTTTTGGGCT TGGCTTTACGGTGCAATCTCCCCTGGGGGCGATCGCCGACCACAACGATTGGTTATTTAATTTTCTACTGCTTTCCCTGG CCGGTAGTTGTTACTTATTTACGCTGATGGCGGTGCTTTCGCCGTCGTTCCAGTCCCTCCAAGATTGGAGCCGTTACCAA AAAGGAGAATGGCAAGATTGGTTCTTTGGGGAACGAAGTCCTGCCATTGGTGCGGTGATGGTGAATGTTGCCATTGTCAC CGGGGCGATCGCCTTGGCTGTGGCTGTGATTGTCGCTCCCCCTTACAAAATCTCTTTTGCGCTTGGGGTGGTGATGCAGG GCTTAATGGTTGTTCTGCTTTGTGTTGTGGCCCAGCGGGTACTTCTGAAAAAAGGCAAGCGGCAAGGCATCGGCGCCACG ATTCTCGTCACCAGTGGGGTGATTTTGCCCTTCATTTTCCTCGGTATTAATGGCGTTAACCCAGAATTACAGGCGGCCCC TTGGTTCTGGACAATTATTCCGATGGTCGCCACTGAAAACGCCAGTTTAGCCAGCATTTTTCTCACCATTTTGGGCCAAA TGGGGGCGATCGCCGTGCTGCATTGGGTTGTGGGTCGCCGGATTCAGCAGCTTGGTACCTCAGAGCTAAAGCAAACCCTG ACCCCAGCGGGTTAA
Upstream 100 bases:
>100_bases GCTGGGCCACCAACAAACAACCTAGCAGTGGCCGTTTGAATTTATCTATAAGTTTGCCCACATTTTTTAATCGTTTATTG ATCCCTATCTCCAAAACATC
Downstream 100 bases:
>100_bases TTCCTAAATTACATAAAGTCTCGTCGGTCGAAAATGCTTCTCCTTTGCTAAGAACCATAATCCCAGGTATCAACCATGGA TAGAATCCTCAACCCCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTTNHYCIGRAPADFDPNSHLIH SQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGGVYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPS LIYVGLALVLPLHFWAGLRGGIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAGLIYLLLYGMGIYWFLQAFRR KFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIADHNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQ KGEWQDWFFGERSPAIGAVMVNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVLHWVVGRRIQQLGTSELKQTL TPAG
Sequences:
>Translated_564_residues MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTTNHYCIGRAPADFDPNSHLIH SQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGGVYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPS LIYVGLALVLPLHFWAGLRGGIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAGLIYLLLYGMGIYWFLQAFRR KFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIADHNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQ KGEWQDWFFGERSPAIGAVMVNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVLHWVVGRRIQQLGTSELKQTL TPAG >Mature_564_residues MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTTNHYCIGRAPADFDPNSHLIH SQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGGVYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPS LIYVGLALVLPLHFWAGLRGGIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAGLIYLLLYGMGIYWFLQAFRR KFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIADHNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQ KGEWQDWFFGERSPAIGAVMVNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVLHWVVGRRIQQLGTSELKQTL TPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61674; Mature: 61674
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTT CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC NHYCIGRAPADFDPNSHLIHSQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGG CCEEEECCCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPSLIYVGLALVLPLHFWAGLRG HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC GIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCEEEEEE ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAG CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHEEEEEECCCHHHH LIYLLLYGMGIYWFLQAFRRKFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIAD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCHHHHHHHHHCCCHHCCCHHHHCC HNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQKGEWQDWFFGERSPAIGAVM CCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH VNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVL EEHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH HWVVGRRIQQLGTSELKQTLTPAG HHHHHHHHHHHCHHHHHHHCCCCC >Mature Secondary Structure MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTT CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC NHYCIGRAPADFDPNSHLIHSQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGG CCEEEECCCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPSLIYVGLALVLPLHFWAGLRG HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC GIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCEEEEEE ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAG CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHEEEEEECCCHHHH LIYLLLYGMGIYWFLQAFRRKFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIAD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCHHHHHHHHHCCCHHCCCHHHHCC HNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQKGEWQDWFFGERSPAIGAVM CCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH VNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVL EEHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH HWVVGRRIQQLGTSELKQTLTPAG HHHHHHHHHHHCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA