Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078822

Identifier: 170078822

GI number: 170078822

Start: 2310813

End: 2312507

Strand: Direct

Name: 170078822

Synonym: SYNPCC7002_A2224

Alternate gene names: NA

Gene position: 2310813-2312507 (Clockwise)

Preceding gene: 170078821

Following gene: 170078823

Centisome position: 76.82

GC content: 50.86

Gene sequence:

>1695_bases
ATGGTTTTTCATCAATGGCTAGACCGCATCGGTGACTGGAATCCTCAGCTTTTTCGGGAGCTAAAAGGCCGACTGTCTAA
AAAAGCCCTCGGTTTAGTGGCGATCGCCTCTTTGTTCACGCAGGGAATATTTTATTTAAGTCTGAGAATCGCCCTCCCCA
GTGCTGGGATTAGCACCACCAACCATTACTGCATCGGTCGCGCCCCGGCAGACTTTGATCCCAATAGCCATTTGATCCAT
AGCCAAAACTTTTGTGTGGCTGATGCGGCGGGAAATTTAAACCTAAATTGGCCCCTGTGGTGGACTGACCTATTTATTAC
CCTCAGTGTGGTGGGATTTTTCGTGGCGCTGTTGGGGGGCGTTTACTTACTAATCCAAGATTTGGGCAAAGAGCAAAAGG
CAGGCACTTTGAACTTCGTCAAATTGAGTCCCCAGTCGGCCCAGGCGATCGCCATTGGCAAGATTTTAGGGGTTCCCAGT
CTCATTTATGTCGGCCTGGCCTTGGTTTTGCCCTTACACTTTTGGGCCGGACTCAGGGGCGGCATTCCGTTGCCATTAAT
CCTGCTTTTCTACGGTGTGATCACAGCTAGTTACGGCTTTTTCTATAGTGGTGCGGCGCTCTATAGTTTGGTGAATCCAA
CCCAACCGGCCCTGAAAGCTTGGTTAGCGACGGGGGGACTTTTTTACTTGATGATGGGGAGCACGACGTTTCTCCTCCAG
GAAAATAGCCACGTCGGCAATCTCATGGATGGCGTCAATTTGTTTAATCCGCTGCATATGTTGGTGTATTTGGGTCAAGC
CAGTGCCGCTGCGGAACAACTGCTCACGTTTAACTACGACAGCCTCGCCGATGTTTCCTTTTTCCGGGTTTATCTTTGGG
AGAATGGGGCGATCGCCGGTTTGATTTATCTGTTGCTTTATGGAATGGGGATCTACTGGTTTCTCCAAGCGTTCCGCCGG
AAATTTCATTATCTCAATGGCACCCTCCTTAGCAAGAAACAGAGTTATGGTCTAACGGCGTTGCTCACCATTTTTGGGCT
TGGCTTTACGGTGCAATCTCCCCTGGGGGCGATCGCCGACCACAACGATTGGTTATTTAATTTTCTACTGCTTTCCCTGG
CCGGTAGTTGTTACTTATTTACGCTGATGGCGGTGCTTTCGCCGTCGTTCCAGTCCCTCCAAGATTGGAGCCGTTACCAA
AAAGGAGAATGGCAAGATTGGTTCTTTGGGGAACGAAGTCCTGCCATTGGTGCGGTGATGGTGAATGTTGCCATTGTCAC
CGGGGCGATCGCCTTGGCTGTGGCTGTGATTGTCGCTCCCCCTTACAAAATCTCTTTTGCGCTTGGGGTGGTGATGCAGG
GCTTAATGGTTGTTCTGCTTTGTGTTGTGGCCCAGCGGGTACTTCTGAAAAAAGGCAAGCGGCAAGGCATCGGCGCCACG
ATTCTCGTCACCAGTGGGGTGATTTTGCCCTTCATTTTCCTCGGTATTAATGGCGTTAACCCAGAATTACAGGCGGCCCC
TTGGTTCTGGACAATTATTCCGATGGTCGCCACTGAAAACGCCAGTTTAGCCAGCATTTTTCTCACCATTTTGGGCCAAA
TGGGGGCGATCGCCGTGCTGCATTGGGTTGTGGGTCGCCGGATTCAGCAGCTTGGTACCTCAGAGCTAAAGCAAACCCTG
ACCCCAGCGGGTTAA

Upstream 100 bases:

>100_bases
GCTGGGCCACCAACAAACAACCTAGCAGTGGCCGTTTGAATTTATCTATAAGTTTGCCCACATTTTTTAATCGTTTATTG
ATCCCTATCTCCAAAACATC

Downstream 100 bases:

>100_bases
TTCCTAAATTACATAAAGTCTCGTCGGTCGAAAATGCTTCTCCTTTGCTAAGAACCATAATCCCAGGTATCAACCATGGA
TAGAATCCTCAACCCCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTTNHYCIGRAPADFDPNSHLIH
SQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGGVYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPS
LIYVGLALVLPLHFWAGLRGGIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ
ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAGLIYLLLYGMGIYWFLQAFRR
KFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIADHNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQ
KGEWQDWFFGERSPAIGAVMVNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT
ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVLHWVVGRRIQQLGTSELKQTL
TPAG

Sequences:

>Translated_564_residues
MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTTNHYCIGRAPADFDPNSHLIH
SQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGGVYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPS
LIYVGLALVLPLHFWAGLRGGIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ
ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAGLIYLLLYGMGIYWFLQAFRR
KFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIADHNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQ
KGEWQDWFFGERSPAIGAVMVNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT
ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVLHWVVGRRIQQLGTSELKQTL
TPAG
>Mature_564_residues
MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTTNHYCIGRAPADFDPNSHLIH
SQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGGVYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPS
LIYVGLALVLPLHFWAGLRGGIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ
ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAGLIYLLLYGMGIYWFLQAFRR
KFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIADHNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQ
KGEWQDWFFGERSPAIGAVMVNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT
ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVLHWVVGRRIQQLGTSELKQTL
TPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61674; Mature: 61674

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTT
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
NHYCIGRAPADFDPNSHLIHSQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGG
CCEEEECCCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPSLIYVGLALVLPLHFWAGLRG
HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCEEEEEE
ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAG
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHEEEEEECCCHHHH
LIYLLLYGMGIYWFLQAFRRKFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCHHHHHHHHHCCCHHCCCHHHHCC
HNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQKGEWQDWFFGERSPAIGAVM
CCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
VNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVL
EEHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
HWVVGRRIQQLGTSELKQTLTPAG
HHHHHHHHHHHCHHHHHHHCCCCC
>Mature Secondary Structure
MVFHQWLDRIGDWNPQLFRELKGRLSKKALGLVAIASLFTQGIFYLSLRIALPSAGISTT
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
NHYCIGRAPADFDPNSHLIHSQNFCVADAAGNLNLNWPLWWTDLFITLSVVGFFVALLGG
CCEEEECCCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VYLLIQDLGKEQKAGTLNFVKLSPQSAQAIAIGKILGVPSLIYVGLALVLPLHFWAGLRG
HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GIPLPLILLFYGVITASYGFFYSGAALYSLVNPTQPALKAWLATGGLFYLMMGSTTFLLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCEEEEEE
ENSHVGNLMDGVNLFNPLHMLVYLGQASAAAEQLLTFNYDSLADVSFFRVYLWENGAIAG
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHEEEEEECCCHHHH
LIYLLLYGMGIYWFLQAFRRKFHYLNGTLLSKKQSYGLTALLTIFGLGFTVQSPLGAIAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHCCHHHHHHHHHCCCHHCCCHHHHCC
HNDWLFNFLLLSLAGSCYLFTLMAVLSPSFQSLQDWSRYQKGEWQDWFFGERSPAIGAVM
CCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
VNVAIVTGAIALAVAVIVAPPYKISFALGVVMQGLMVVLLCVVAQRVLLKKGKRQGIGAT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
ILVTSGVILPFIFLGINGVNPELQAAPWFWTIIPMVATENASLASIFLTILGQMGAIAVL
EEHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
HWVVGRRIQQLGTSELKQTLTPAG
HHHHHHHHHHHCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA