| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078823
Identifier: 170078823
GI number: 170078823
Start: 2312583
End: 2314253
Strand: Direct
Name: 170078823
Synonym: SYNPCC7002_A2225
Alternate gene names: NA
Gene position: 2312583-2314253 (Clockwise)
Preceding gene: 170078822
Following gene: 170078824
Centisome position: 76.88
GC content: 52.18
Gene sequence:
>1671_bases ATGGATAGAATCCTCAACCCCCTCGGTGATTGGAATCCCCAACTTTTTCGGGAATTAAAAGGCCGCTTCACCCGTAAAAA TGTGGCGATCTCCTTTGGTCTTGCTTGCTTTACCCAATGCCTGCTTTATCTTTTCTACCTGGGAGAATTGCCAAATGCCC TGGTTGATCAACCCTACAACCGTTACTGTACCGGGCCGGAAGATGACTACTGGCGGTCTACCTATCAATGTTTGAGGGAT GGCAACGACTGGCTGATCAACTGGCAGTTATGGCATTTAGATGTGTTCATGGCTCTGACTCTGGTGGGCCTGGGGATTCT CCTGGTGGTTGGTACTCATTTAATTGGGGCCGATGTCGCGAAGGAAGAACAACGGGGCACCCTGGGTTTTGTGCGCCTCA GTCCCCAACCCGTCTCAAAAATTTTGCTCGGGAAACTGTTGGGAGTGCCTAGCCTGATTTATGTTGGTTTAGTTTTTGTC CTGCCCTGGCACCTGTGGCTCGGTTTTCAAGGTGGCATTGCTCTGGGTTGGCTAATGGTGCTTTATGGGGTGGCGATCGC CGCTAGTTTCACTGCCTTTACGGGGGTGGTTCTATGGAGTTTCGTGGGTCGTGAACTGTTGGGGGGCTTCCACACCTGGC TCTACAGTGGTGGCCTCGGCCTCTATCTTTTTGGGATGTCTGTGGCTTGCTTTGAGGATAATTTTCCCAGCTATACCCCC TTTGATTGGGTGCGGCTGTTCTATCCGGGCAATATCTTTTATTACCTCGTCGACCAAAATTCCCTCGCCCCGGAAACCAT CGGTTATTTTTCACCCCACAACTGGTTTCAGACCCAATGGTACGGCTCTTCCCTTTGGGTGGGGGGCCTTGGGTTTATGG CGATCCATTATGCTCTTTTAGGGGCCTTGGCTTGGCAAGGGATTCGGCGGCGTTTTTATGATCCCCAGGCCACGATGATC ACGAAGGCCATGGGCTGCGGGGTCGCCGTTAGCAGCACGATTTTTATGACTGGGTTTGTTTGGGCTGGCGATCGCCCCGA ACGTCTTTTTGCCAATTTTCAAACCCTGCAAGGCTTCTATTGGATGGTAATGTTGGGGCTAATTCTTCTGTTAACACCGA CCCGGCAACGGATACAAGATTGGGCGAGATTTCGACATCAAAATACTTCTCACCGACGGTTTAAATGGGCCTTTTTCAGA AATGATCGCTCTCCGGCCCTAGGGGCGATCGCCTTGATGTTGCTCCTCACCACGGGCTACCAAATGACCATTGTCCTCTT GTCCCCCCTGCCCAGCCAAAAACTGCTGGTGATCGCAGCTCTAGGACTCCAGGGAGGTTGCCTTTTCCTTCTGGCCGTTT TAACCCAATGGATCTTTCTCCGTCGTCAAAAACAACGGGCCATTTGGTTTGGCGTTGCCGTCATCGGGTCTAGTGTTGTC CCTTTTATCCTCTTCATGGTCTTCCATGGACGCTTTACCTTGCCCATTACCTTCGGCCTCTTTTCGGCGTTTCCCCTCAG TGCCGTTGCCATGGCGGTGCCCAGTATGGTGATCTGGAGTGCGATCGCCCAGTGGGGCATGATTCTCGGTTGTCTTTGGG GACTGCAACAACAGATCCAACGCCTCGGACAATCCGACCTGAAAACTTTTCAGCCGACCCCTACCGAATGA
Upstream 100 bases:
>100_bases GCAAACCCTGACCCCAGCGGGTTAATTCCTAAATTACATAAAGTCTCGTCGGTCGAAAATGCTTCTCCTTTGCTAAGAAC CATAATCCCAGGTATCAACC
Downstream 100 bases:
>100_bases TCTAAAACATGTTATTCTTGTATTCCTGTATGGGCACGTGGCTCAGTGGATAGAGCATCAGATTCCGGTTCTGAGGGTCG GGGGTTCGAATCCCTCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYNRYCTGPEDDYWRSTYQCLRD GNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVAKEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFV LPWHLWLGFQGGIALGWLMVLYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALLGALAWQGIRRRFYDPQATMI TKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFYWMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFR NDRSPALGAIALMLLLTTGYQMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQRLGQSDLKTFQPTPTE
Sequences:
>Translated_556_residues MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYNRYCTGPEDDYWRSTYQCLRD GNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVAKEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFV LPWHLWLGFQGGIALGWLMVLYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALLGALAWQGIRRRFYDPQATMI TKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFYWMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFR NDRSPALGAIALMLLLTTGYQMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQRLGQSDLKTFQPTPTE >Mature_556_residues MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYNRYCTGPEDDYWRSTYQCLRD GNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVAKEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFV LPWHLWLGFQGGIALGWLMVLYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALLGALAWQGIRRRFYDPQATMI TKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFYWMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFR NDRSPALGAIALMLLLTTGYQMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQRLGQSDLKTFQPTPTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62957; Mature: 62957
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC RYCTGPEDDYWRSTYQCLRDGNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVA CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFVLPWHLWLGFQGGIALGWLMV HHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCC FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALL HHHEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHH GALAWQGIRRRFYDPQATMITKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFY HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH WMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFRNDRSPALGAIALMLLLTTGY HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC QMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV EEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQ HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGQSDLKTFQPTPTE HHCHHHHCCCCCCCCC >Mature Secondary Structure MDRILNPLGDWNPQLFRELKGRFTRKNVAISFGLACFTQCLLYLFYLGELPNALVDQPYN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC RYCTGPEDDYWRSTYQCLRDGNDWLINWQLWHLDVFMALTLVGLGILLVVGTHLIGADVA CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEEQRGTLGFVRLSPQPVSKILLGKLLGVPSLIYVGLVFVLPWHLWLGFQGGIALGWLMV HHHCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LYGVAIAASFTAFTGVVLWSFVGRELLGGFHTWLYSGGLGLYLFGMSVACFEDNFPSYTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCC FDWVRLFYPGNIFYYLVDQNSLAPETIGYFSPHNWFQTQWYGSSLWVGGLGFMAIHYALL HHHEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHH GALAWQGIRRRFYDPQATMITKAMGCGVAVSSTIFMTGFVWAGDRPERLFANFQTLQGFY HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH WMVMLGLILLLTPTRQRIQDWARFRHQNTSHRRFKWAFFRNDRSPALGAIALMLLLTTGY HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC QMTIVLLSPLPSQKLLVIAALGLQGGCLFLLAVLTQWIFLRRQKQRAIWFGVAVIGSSVV EEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH PFILFMVFHGRFTLPITFGLFSAFPLSAVAMAVPSMVIWSAIAQWGMILGCLWGLQQQIQ HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGQSDLKTFQPTPTE HHCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA