Click here to switch to the map view.

The map label for this gene is yadH [H]

Identifier: 170078780

GI number: 170078780

Start: 2272830

End: 2273678

Strand: Direct

Name: yadH [H]

Synonym: SYNPCC7002_A2182

Alternate gene names: 170078780

Gene position: 2272830-2273678 (Clockwise)

Preceding gene: 170078776

Following gene: 170078781

Centisome position: 75.56

GC content: 53.47

Gene sequence:

>849_bases
GTGACTAACCTAGAAGCCGTCTCCGATCAAGTCCGTACCACCACGACCCCACCGCCCCGTCAACGCTTTGAACTCGCCCA
TCTTTGGGGTGATACCCTCGGTGTTTTTTGGGGGGACTGGTTAAAGTTGCGGGTGCGCCTCAAACAGGTGGCAGCAACGG
GTTTGGTTTCGCCACTCATCTATATTTTGGCTTTTGGTCTGGGACTCGGTAGTGCCCTAGATCAAGCGATTACTCCCCCC
GCCGGGGATACCTACCTAGAATTTATCTTGCCGGGGATGGTTGCCCTGTCTTCGATGACCATTAGTTTCGGGGGGACGAC
TTTCTCGATCTGTGGCGATCGCCTCTACAGCAAAACCTTTGAAGAATTGCTCCTGTTGCCCGTCCATCCCCTCGCCTTAC
ACCTAGGGAAAATGATGGCTGGCATCCTGCGGGGACTGATGACGGCGGGGTCGGTGCTGATTGTGGCAATCCTTTTTACG
GGCAAAGTTTTTAGCTTTATCAATCCTCTGTTCATTCTGTTGCTGCTGTTGAACTGCGCTGTGTTTGCGGGGTTAGGGGT
GATTGTCGGTCTACGGGTCAAATCCCTGGAAAGTGTGGGGATTTTTAATAATTTCTTGATTGTGCCGATGTCCTTTTTGG
GGGCGACCTTTTTCGACCCGGAAACCTTACCCCGTCTGTTCCGGGCAATTGTCTATTGCATTCCCCTCACCTACACCACC
ACCGGACTACGGGCGGCGGCCTATTTACCCCTTTCGGAATTTCCCTGGCACGCGATTCCTATTTTGGCGGGGGTGGCGAT
CGCCCTAGCCTTTGTGGGTGCTTACCAATTTTCCCACCAGCGGGATTAA

Upstream 100 bases:

>100_bases
AATCTAGCCCCGAATCATTAGCTACCTAAATGATGAACCCTAGCAAGTTCGCCTAAAATTCGATAATGTGAAGCGATGTA
AAGTTGTCCTAAAAAGCACC

Downstream 100 bases:

>100_bases
AACTATGACCTGGCAAACGGTGACGGGCTTGCTTACACGGGGTCATCAAGTGGCTTCGGGGCAAGCGAAAAACAGTCCCT
ATGAAGCGGGTACCATTGCG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTNLEAVSDQVRTTTTPPPRQRFELAHLWGDTLGVFWGDWLKLRVRLKQVAATGLVSPLIYILAFGLGLGSALDQAITPP
AGDTYLEFILPGMVALSSMTISFGGTTFSICGDRLYSKTFEELLLLPVHPLALHLGKMMAGILRGLMTAGSVLIVAILFT
GKVFSFINPLFILLLLLNCAVFAGLGVIVGLRVKSLESVGIFNNFLIVPMSFLGATFFDPETLPRLFRAIVYCIPLTYTT
TGLRAAAYLPLSEFPWHAIPILAGVAIALAFVGAYQFSHQRD

Sequences:

>Translated_282_residues
MTNLEAVSDQVRTTTTPPPRQRFELAHLWGDTLGVFWGDWLKLRVRLKQVAATGLVSPLIYILAFGLGLGSALDQAITPP
AGDTYLEFILPGMVALSSMTISFGGTTFSICGDRLYSKTFEELLLLPVHPLALHLGKMMAGILRGLMTAGSVLIVAILFT
GKVFSFINPLFILLLLLNCAVFAGLGVIVGLRVKSLESVGIFNNFLIVPMSFLGATFFDPETLPRLFRAIVYCIPLTYTT
TGLRAAAYLPLSEFPWHAIPILAGVAIALAFVGAYQFSHQRD
>Mature_281_residues
TNLEAVSDQVRTTTTPPPRQRFELAHLWGDTLGVFWGDWLKLRVRLKQVAATGLVSPLIYILAFGLGLGSALDQAITPPA
GDTYLEFILPGMVALSSMTISFGGTTFSICGDRLYSKTFEELLLLPVHPLALHLGKMMAGILRGLMTAGSVLIVAILFTG
KVFSFINPLFILLLLLNCAVFAGLGVIVGLRVKSLESVGIFNNFLIVPMSFLGATFFDPETLPRLFRAIVYCIPLTYTTT
GLRAAAYLPLSEFPWHAIPILAGVAIALAFVGAYQFSHQRD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=217, Percent_Identity=24.8847926267281, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 30652; Mature: 30521

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLEAVSDQVRTTTTPPPRQRFELAHLWGDTLGVFWGDWLKLRVRLKQVAATGLVSPLI
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YILAFGLGLGSALDQAITPPAGDTYLEFILPGMVALSSMTISFGGTTFSICGDRLYSKTF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
EELLLLPVHPLALHLGKMMAGILRGLMTAGSVLIVAILFTGKVFSFINPLFILLLLLNCA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFAGLGVIVGLRVKSLESVGIFNNFLIVPMSFLGATFFDPETLPRLFRAIVYCIPLTYTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TGLRAAAYLPLSEFPWHAIPILAGVAIALAFVGAYQFSHQRD
HHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TNLEAVSDQVRTTTTPPPRQRFELAHLWGDTLGVFWGDWLKLRVRLKQVAATGLVSPLI
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YILAFGLGLGSALDQAITPPAGDTYLEFILPGMVALSSMTISFGGTTFSICGDRLYSKTF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
EELLLLPVHPLALHLGKMMAGILRGLMTAGSVLIVAILFTGKVFSFINPLFILLLLLNCA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFAGLGVIVGLRVKSLESVGIFNNFLIVPMSFLGATFFDPETLPRLFRAIVYCIPLTYTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TGLRAAAYLPLSEFPWHAIPILAGVAIALAFVGAYQFSHQRD
HHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]