Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078776

Identifier: 170078776

GI number: 170078776

Start: 2268254

End: 2271106

Strand: Direct

Name: 170078776

Synonym: SYNPCC7002_A2178

Alternate gene names: NA

Gene position: 2268254-2271106 (Clockwise)

Preceding gene: 170078773

Following gene: 170078780

Centisome position: 75.41

GC content: 49.07

Gene sequence:

>2853_bases
TTGGCACAGCAAAATGGTGTTGAGCTAAAAGCAAAGCCCAACTTCAGGCCCGGTTGTATTACGTCGTACTACTTTTGTGT
TTCTGTTGTAGATCTTTCTAGTGACCATTTATTTTTTACAATCCACAGCAAAATGACCTTGCCTAGATCTCGCCCCATTC
TCCGTAGTCTTCTTTGTGCGATGGCCTCCACTCCCTTCGCCACCCTCGCCGCCGCAATGGAAGCGACTAATGTCAGCGTT
GATAATTCCCTTGAGCAGGTCAATTTATCCCCCACTTCTGCACCAGAAGCCCAAGCAGTCCAGTCTCCAGCAGAAGTTTC
AACCGTAGTTCAGAATACTGTCCCTGGGCCTAATCCAAAGCAGCAACTCATTGCCCGCGCCCCTGCCACCACAGCACAAG
ATGAATCAAAGCCATCAGCCGAAGCTCCTCCAACAGAACAACTAATTGCCCAAGTCCCTACCACAGGTAACTCTGGAGCC
CCAGCAACAGGTCTCTCGTCGGCTGAGTTAATCCAGTTAGCCCAGCTCCTTTCGCAGCTCGGCGATCTCTCCGCACTCCA
AGAACAACTCAGTAATATCCAAGAAGAGTTGGGTGAAATTCGATCGGTGGTTCGTGATCTCCAACAGGAGAGTGTCATTA
ACTCTCAGGCACCCCCTCGCTTATCTGAACCAATACAGCAGCAAGAGAGGGTTGCGACGAATCAAGAAAATTCGCGTCCT
GTAGCAACATCGTCACCAGTTTCTAATACAGAAGCCAGCACAGAAACAGACAGTGACGTCGCGCAAATTCCTGTCTTAAC
GCCAGATCCAATTCCAGAAGAAGAGATACCAGAACCTGAGACTGACGATTTTCTTCAAAAAATGCCTCTCAATCGTGTTA
ATCCCTTAATCACGACACAAAATCTGGATGGCGTACCGATTTCTCATTTTTCCGATTGGGAAATTGCCGCCTCTGGCCTC
CTGTCCGATGCCACAACGAGCGATGTGAATGTAGACGGCTTTGCTCGGCTGGATTCTGACATTTTCCAAGGAACGACCGC
TGATAACGTGGCGGTGACAGATTTTCGGGGAACTTACGTACGCCTGCGATCTGCCGCCCAAGACCGGGAGGTGGAAACTG
AGATTGATCAGGCTGTAACTCTAGGGGGCTATTTATACCAGTTCACCCTCACAGGAGGATGCGACATCCTTGATCCCGGA
GGAGGCGGTAGTGACGAGACTTGTAGTTTTTTACCCCCGGTTGCCTTCGATCCCCAAAGCTATGACCCAGATACCCTCCT
CCCCGGTCGGCTCCTAGATTCGGGTATTGCTTTTGGTGGGGTCGTTTCAGAAGAAAACTTAGCCTTTATCAAGCAACCTG
GTTTCCAACGAGGATTACCCGGTCAAGAAGTCGGTATTGAACTAAACGTACCCAATTCTGGAATTGTTGCCGTTGGCCCA
GAGACAGGTCGCCAGGGCCAAACCATTCGTCGCGAAAATTTAGATAATACCTACAGTGTTGGAATTGCCAATGTGCGGCA
AGTGCTCAAGCAAAATGACCAGGAAGCCGTTTTAGGGCGAACAGTACGCGGGTTTGCAGCGATTCCCAACGATGAAGATT
TTGGCCTCGATAGTGCAGTGCAGCTAGCAACCTTACTCTTGCCGGATGTTGACCCAGCCCTAGAAGGGGGAGATGCACCA
CCAAATCCGAATGTTAATGCTAACTTGTTTAGCGCTGCGAACAATTCTCGCTTACCTGCCAATAGCTTCACGGCTTATCA
AGGGAGTGTTTCCCGTGCAGAAAGCGTTACGGATCTAAGTACTCCGCCAGAGGATATTCCCGCAGCAACCTCGAACAGTT
TTTGGGTCGGTCTTTCTCCTGTGCTTGATCGTGAGATTGAAATCTTAGAAGATGGCAGTCGTTTTAAGGATTTTAGTGGG
CCGCGTCTGGTGGCAGCCGCTTATGGTGAAGGGGGAGCCGAAGTTGCAGATAATCTGAGTGCTCAAGTAGCAGCGACATT
ACTCAACGAGGTTGGTGGTGTTGATCAGCAGCTATTGTTGGACTTTGATGATATTCAGGATGCCTATACTCAAATTGGCT
TGGCCTTTTTTGAGCGGGATGCAACACAAATCATCAAAACTCGCTACAGTGAGCGAACAAATTATGTGCCTCACCTCAGC
TTTACAGGCAACCGCACAGATAATCGCAACCGGACTCGCTACTATCTAGGGGCTTTAATTGATTACACAGCCGAGGACAC
TCAAGACTGGCTCAAGGCCTATGTCGGAGGGGATTATCGCTATCAAAATGTGAATGCTGGGGTGCGCGCAGAAGTGGGTG
GTATTGGCTACCTCAATCCTGATAAAGACTACTACAGCCGTCTCTGGGGCAATGTTGCAAAAACTTTTTCGGCAAATAAT
GGCAATTCGTTTACTTTAGCGGCAGGCTTGGATTACGCGATTGACCAAGATCAGCAGATTGGCGATATTTTTGTGGGTTC
GACCGGGAGTCGAGCAACGGTAAGTGCGGCGGCTCGACTTGGGGGAGTGACTTTATCGGCAGATCAAAACTTCGGCGGTC
TTTTGCCCAACTCTGATGAAAGTAACCTGACGCTCAGGTTAGGAACTCAATTAGGAGATAACTTCTCTCTGTCTGGTTAT
TACACACCTTTTGATGAGGATACTGTGGTTGCTAGATATGGTGTAAACGCAGGGATTAAATTTGGATCTTTTTACAATAG
TCCCAGCTTAGTCTTTGGTTGGAGTCAGGACGAGTATAAGTTTGCCACAGGAACTTTTACGGATGATCGTTTCACGGTCT
CCTTTAGCACGGGTCAGCCTAATGCTCCTTTTGTGACGGGCACTCGCCGCTAG

Upstream 100 bases:

>100_bases
ACATCATTGATACTGTTGTTTTGATAAGGTTAGCTTGTCGATAACTCAAATTTAACATTGTGAAATATTATCGAGTAATC
TCTGCCTTGAATTTTATCGA

Downstream 100 bases:

>100_bases
TTACTTTTGAGACTAAGTTGCTATTGGGGTAGACCCCAATGATTGATACGTTCCGTTAACCAATTGCTATTTTGCCAATC
GGTTACTGTTTTCTGGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 950; Mature: 949

Protein sequence:

>950_residues
MAQQNGVELKAKPNFRPGCITSYYFCVSVVDLSSDHLFFTIHSKMTLPRSRPILRSLLCAMASTPFATLAAAMEATNVSV
DNSLEQVNLSPTSAPEAQAVQSPAEVSTVVQNTVPGPNPKQQLIARAPATTAQDESKPSAEAPPTEQLIAQVPTTGNSGA
PATGLSSAELIQLAQLLSQLGDLSALQEQLSNIQEELGEIRSVVRDLQQESVINSQAPPRLSEPIQQQERVATNQENSRP
VATSSPVSNTEASTETDSDVAQIPVLTPDPIPEEEIPEPETDDFLQKMPLNRVNPLITTQNLDGVPISHFSDWEIAASGL
LSDATTSDVNVDGFARLDSDIFQGTTADNVAVTDFRGTYVRLRSAAQDREVETEIDQAVTLGGYLYQFTLTGGCDILDPG
GGGSDETCSFLPPVAFDPQSYDPDTLLPGRLLDSGIAFGGVVSEENLAFIKQPGFQRGLPGQEVGIELNVPNSGIVAVGP
ETGRQGQTIRRENLDNTYSVGIANVRQVLKQNDQEAVLGRTVRGFAAIPNDEDFGLDSAVQLATLLLPDVDPALEGGDAP
PNPNVNANLFSAANNSRLPANSFTAYQGSVSRAESVTDLSTPPEDIPAATSNSFWVGLSPVLDREIEILEDGSRFKDFSG
PRLVAAAYGEGGAEVADNLSAQVAATLLNEVGGVDQQLLLDFDDIQDAYTQIGLAFFERDATQIIKTRYSERTNYVPHLS
FTGNRTDNRNRTRYYLGALIDYTAEDTQDWLKAYVGGDYRYQNVNAGVRAEVGGIGYLNPDKDYYSRLWGNVAKTFSANN
GNSFTLAAGLDYAIDQDQQIGDIFVGSTGSRATVSAAARLGGVTLSADQNFGGLLPNSDESNLTLRLGTQLGDNFSLSGY
YTPFDEDTVVARYGVNAGIKFGSFYNSPSLVFGWSQDEYKFATGTFTDDRFTVSFSTGQPNAPFVTGTRR

Sequences:

>Translated_950_residues
MAQQNGVELKAKPNFRPGCITSYYFCVSVVDLSSDHLFFTIHSKMTLPRSRPILRSLLCAMASTPFATLAAAMEATNVSV
DNSLEQVNLSPTSAPEAQAVQSPAEVSTVVQNTVPGPNPKQQLIARAPATTAQDESKPSAEAPPTEQLIAQVPTTGNSGA
PATGLSSAELIQLAQLLSQLGDLSALQEQLSNIQEELGEIRSVVRDLQQESVINSQAPPRLSEPIQQQERVATNQENSRP
VATSSPVSNTEASTETDSDVAQIPVLTPDPIPEEEIPEPETDDFLQKMPLNRVNPLITTQNLDGVPISHFSDWEIAASGL
LSDATTSDVNVDGFARLDSDIFQGTTADNVAVTDFRGTYVRLRSAAQDREVETEIDQAVTLGGYLYQFTLTGGCDILDPG
GGGSDETCSFLPPVAFDPQSYDPDTLLPGRLLDSGIAFGGVVSEENLAFIKQPGFQRGLPGQEVGIELNVPNSGIVAVGP
ETGRQGQTIRRENLDNTYSVGIANVRQVLKQNDQEAVLGRTVRGFAAIPNDEDFGLDSAVQLATLLLPDVDPALEGGDAP
PNPNVNANLFSAANNSRLPANSFTAYQGSVSRAESVTDLSTPPEDIPAATSNSFWVGLSPVLDREIEILEDGSRFKDFSG
PRLVAAAYGEGGAEVADNLSAQVAATLLNEVGGVDQQLLLDFDDIQDAYTQIGLAFFERDATQIIKTRYSERTNYVPHLS
FTGNRTDNRNRTRYYLGALIDYTAEDTQDWLKAYVGGDYRYQNVNAGVRAEVGGIGYLNPDKDYYSRLWGNVAKTFSANN
GNSFTLAAGLDYAIDQDQQIGDIFVGSTGSRATVSAAARLGGVTLSADQNFGGLLPNSDESNLTLRLGTQLGDNFSLSGY
YTPFDEDTVVARYGVNAGIKFGSFYNSPSLVFGWSQDEYKFATGTFTDDRFTVSFSTGQPNAPFVTGTRR
>Mature_949_residues
AQQNGVELKAKPNFRPGCITSYYFCVSVVDLSSDHLFFTIHSKMTLPRSRPILRSLLCAMASTPFATLAAAMEATNVSVD
NSLEQVNLSPTSAPEAQAVQSPAEVSTVVQNTVPGPNPKQQLIARAPATTAQDESKPSAEAPPTEQLIAQVPTTGNSGAP
ATGLSSAELIQLAQLLSQLGDLSALQEQLSNIQEELGEIRSVVRDLQQESVINSQAPPRLSEPIQQQERVATNQENSRPV
ATSSPVSNTEASTETDSDVAQIPVLTPDPIPEEEIPEPETDDFLQKMPLNRVNPLITTQNLDGVPISHFSDWEIAASGLL
SDATTSDVNVDGFARLDSDIFQGTTADNVAVTDFRGTYVRLRSAAQDREVETEIDQAVTLGGYLYQFTLTGGCDILDPGG
GGSDETCSFLPPVAFDPQSYDPDTLLPGRLLDSGIAFGGVVSEENLAFIKQPGFQRGLPGQEVGIELNVPNSGIVAVGPE
TGRQGQTIRRENLDNTYSVGIANVRQVLKQNDQEAVLGRTVRGFAAIPNDEDFGLDSAVQLATLLLPDVDPALEGGDAPP
NPNVNANLFSAANNSRLPANSFTAYQGSVSRAESVTDLSTPPEDIPAATSNSFWVGLSPVLDREIEILEDGSRFKDFSGP
RLVAAAYGEGGAEVADNLSAQVAATLLNEVGGVDQQLLLDFDDIQDAYTQIGLAFFERDATQIIKTRYSERTNYVPHLSF
TGNRTDNRNRTRYYLGALIDYTAEDTQDWLKAYVGGDYRYQNVNAGVRAEVGGIGYLNPDKDYYSRLWGNVAKTFSANNG
NSFTLAAGLDYAIDQDQQIGDIFVGSTGSRATVSAAARLGGVTLSADQNFGGLLPNSDESNLTLRLGTQLGDNFSLSGYY
TPFDEDTVVARYGVNAGIKFGSFYNSPSLVFGWSQDEYKFATGTFTDDRFTVSFSTGQPNAPFVTGTRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101940; Mature: 101809

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQNGVELKAKPNFRPGCITSYYFCVSVVDLSSDHLFFTIHSKMTLPRSRPILRSLLCA
CCCCCCCEEEECCCCCCCHHHHHEEHHEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHH
MASTPFATLAAAMEATNVSVDNSLEQVNLSPTSAPEAQAVQSPAEVSTVVQNTVPGPNPK
HHCCCHHHHHHHHHHCCCCCCCCHHEEECCCCCCCHHHHHCCHHHHHHHHHHCCCCCCHH
QQLIARAPATTAQDESKPSAEAPPTEQLIAQVPTTGNSGAPATGLSSAELIQLAQLLSQL
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
GDLSALQEQLSNIQEELGEIRSVVRDLQQESVINSQAPPRLSEPIQQQERVATNQENSRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
VATSSPVSNTEASTETDSDVAQIPVLTPDPIPEEEIPEPETDDFLQKMPLNRVNPLITTQ
CCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEC
NLDGVPISHFSDWEIAASGLLSDATTSDVNVDGFARLDSDIFQGTTADNVAVTDFRGTYV
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHH
RLRSAAQDREVETEIDQAVTLGGYLYQFTLTGGCDILDPGGGGSDETCSFLPPVAFDPQS
HHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCC
YDPDTLLPGRLLDSGIAFGGVVSEENLAFIKQPGFQRGLPGQEVGIELNVPNSGIVAVGP
CCCCCCCCHHHHHCCCCCCCEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECC
ETGRQGQTIRRENLDNTYSVGIANVRQVLKQNDQEAVLGRTVRGFAAIPNDEDFGLDSAV
CCCCCCCHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCHHHH
QLATLLLPDVDPALEGGDAPPNPNVNANLFSAANNSRLPANSFTAYQGSVSRAESVTDLS
HHHHHHCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCHHHHHHHHCCC
TPPEDIPAATSNSFWVGLSPVLDREIEILEDGSRFKDFSGPRLVAAAYGEGGAEVADNLS
CCCHHCCCCCCCCEEEECCHHHCCCHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHH
AQVAATLLNEVGGVDQQLLLDFDDIQDAYTQIGLAFFERDATQIIKTRYSERTNYVPHLS
HHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FTGNRTDNRNRTRYYLGALIDYTAEDTQDWLKAYVGGDYRYQNVNAGVRAEVGGIGYLNP
ECCCCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCC
DKDYYSRLWGNVAKTFSANNGNSFTLAAGLDYAIDQDQQIGDIFVGSTGSRATVSAAARL
CHHHHHHHHHHHHHHEECCCCCEEEEEECCCHHCCCCCCCCEEEECCCCCCHHHHHHHHH
GGVTLSADQNFGGLLPNSDESNLTLRLGTQLGDNFSLSGYYTPFDEDTVVARYGVNAGIK
CCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCEEEEECCCCCEE
FGSFYNSPSLVFGWSQDEYKFATGTFTDDRFTVSFSTGQPNAPFVTGTRR
ECCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCEECCCCC
>Mature Secondary Structure 
AQQNGVELKAKPNFRPGCITSYYFCVSVVDLSSDHLFFTIHSKMTLPRSRPILRSLLCA
CCCCCCEEEECCCCCCCHHHHHEEHHEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHH
MASTPFATLAAAMEATNVSVDNSLEQVNLSPTSAPEAQAVQSPAEVSTVVQNTVPGPNPK
HHCCCHHHHHHHHHHCCCCCCCCHHEEECCCCCCCHHHHHCCHHHHHHHHHHCCCCCCHH
QQLIARAPATTAQDESKPSAEAPPTEQLIAQVPTTGNSGAPATGLSSAELIQLAQLLSQL
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
GDLSALQEQLSNIQEELGEIRSVVRDLQQESVINSQAPPRLSEPIQQQERVATNQENSRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
VATSSPVSNTEASTETDSDVAQIPVLTPDPIPEEEIPEPETDDFLQKMPLNRVNPLITTQ
CCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEC
NLDGVPISHFSDWEIAASGLLSDATTSDVNVDGFARLDSDIFQGTTADNVAVTDFRGTYV
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHH
RLRSAAQDREVETEIDQAVTLGGYLYQFTLTGGCDILDPGGGGSDETCSFLPPVAFDPQS
HHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCC
YDPDTLLPGRLLDSGIAFGGVVSEENLAFIKQPGFQRGLPGQEVGIELNVPNSGIVAVGP
CCCCCCCCHHHHHCCCCCCCEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECC
ETGRQGQTIRRENLDNTYSVGIANVRQVLKQNDQEAVLGRTVRGFAAIPNDEDFGLDSAV
CCCCCCCHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCHHHH
QLATLLLPDVDPALEGGDAPPNPNVNANLFSAANNSRLPANSFTAYQGSVSRAESVTDLS
HHHHHHCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCHHHHHHHHCCC
TPPEDIPAATSNSFWVGLSPVLDREIEILEDGSRFKDFSGPRLVAAAYGEGGAEVADNLS
CCCHHCCCCCCCCEEEECCHHHCCCHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHH
AQVAATLLNEVGGVDQQLLLDFDDIQDAYTQIGLAFFERDATQIIKTRYSERTNYVPHLS
HHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FTGNRTDNRNRTRYYLGALIDYTAEDTQDWLKAYVGGDYRYQNVNAGVRAEVGGIGYLNP
ECCCCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCC
DKDYYSRLWGNVAKTFSANNGNSFTLAAGLDYAIDQDQQIGDIFVGSTGSRATVSAAARL
CHHHHHHHHHHHHHHEECCCCCEEEEEECCCHHCCCCCCCCEEEECCCCCCHHHHHHHHH
GGVTLSADQNFGGLLPNSDESNLTLRLGTQLGDNFSLSGYYTPFDEDTVVARYGVNAGIK
CCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCEEEEECCCCCEE
FGSFYNSPSLVFGWSQDEYKFATGTFTDDRFTVSFSTGQPNAPFVTGTRR
ECCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA