| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078763
Identifier: 170078763
GI number: 170078763
Start: 2246359
End: 2247006
Strand: Direct
Name: 170078763
Synonym: SYNPCC7002_A2165
Alternate gene names: NA
Gene position: 2246359-2247006 (Clockwise)
Preceding gene: 170078762
Following gene: 170078764
Centisome position: 74.68
GC content: 48.77
Gene sequence:
>648_bases ATGAAGATTTTGCGTTTTATTCTTAAAAACAAACCATTCAATGTGCAAATGAGCAGTGGTCGAAAGTTTTCACATTTTCT GACCGGCATTCTCATTAGTGCCTTGGTGATCGCCACCTTGGTTTGGCCCATTGTCCCTGTGCAAGCAGCCCCCAATCCCC CCGATTTTGCTCGGGCCGTGCAGGCCATCGAAGATCTCGACCAAATGCGCTCTGAGCTAGCCAAAACGATTGATCCGACG GCAGAAATTACACCGCAAACTATGCAGGAAGTTTGTAAACCAGTGGGGATGAAAGCGAGGCAACTGAGTCAAGATAACGG TTGGCAAGTCAAACAGGTGGCTAAAAAATATCGCAATCCAGACCATGCCCCGCAAAATCTCCAGGAAACCATGGCGATCG CCAAATTTACGCAACACCCCGAACTCCTGAGCTATAGTCAAATCCAAGGCGATCGCCTCCACTACTACCGCCGCATTAAT ATCGAAAGCAGTTGTCTCGCCTGCCACGGCCCGAAGGACAATCGCCCCAATTTCATCAAAGCTAAATATTTAGATGATCT CGCCTACGACTTCAAAGCTGGCGACCTACGGGGACTGTATTCTGTCATTATTCCTAGCCTCGAAACGGCCCAGACTAACC CTGAGTAA
Upstream 100 bases:
>100_bases GCTTTTCTTGAATTTTAAGAAGATTTAATTATCAATTCTAAAAAGCGAATTTTTCCTGAGAAATTGACTAAACTATTGAA TAAAAAATGGGAAAAATACA
Downstream 100 bases:
>100_bases ACCCCTCACCCCAGATTCAGCCAATGTTTTTTCTTAAAAAAGGATTGATTCTTCTCAGCCTAAGCCTGATTCTCTTGGTG AGTAGCGGCGTTTGGGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKILRFILKNKPFNVQMSSGRKFSHFLTGILISALVIATLVWPIVPVQAAPNPPDFARAVQAIEDLDQMRSELAKTIDPT AEITPQTMQEVCKPVGMKARQLSQDNGWQVKQVAKKYRNPDHAPQNLQETMAIAKFTQHPELLSYSQIQGDRLHYYRRIN IESSCLACHGPKDNRPNFIKAKYLDDLAYDFKAGDLRGLYSVIIPSLETAQTNPE
Sequences:
>Translated_215_residues MKILRFILKNKPFNVQMSSGRKFSHFLTGILISALVIATLVWPIVPVQAAPNPPDFARAVQAIEDLDQMRSELAKTIDPT AEITPQTMQEVCKPVGMKARQLSQDNGWQVKQVAKKYRNPDHAPQNLQETMAIAKFTQHPELLSYSQIQGDRLHYYRRIN IESSCLACHGPKDNRPNFIKAKYLDDLAYDFKAGDLRGLYSVIIPSLETAQTNPE >Mature_215_residues MKILRFILKNKPFNVQMSSGRKFSHFLTGILISALVIATLVWPIVPVQAAPNPPDFARAVQAIEDLDQMRSELAKTIDPT AEITPQTMQEVCKPVGMKARQLSQDNGWQVKQVAKKYRNPDHAPQNLQETMAIAKFTQHPELLSYSQIQGDRLHYYRRIN IESSCLACHGPKDNRPNFIKAKYLDDLAYDFKAGDLRGLYSVIIPSLETAQTNPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24335; Mature: 24335
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILRFILKNKPFNVQMSSGRKFSHFLTGILISALVIATLVWPIVPVQAAPNPPDFARAV CHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QAIEDLDQMRSELAKTIDPTAEITPQTMQEVCKPVGMKARQLSQDNGWQVKQVAKKYRNP HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCC DHAPQNLQETMAIAKFTQHPELLSYSQIQGDRLHYYRRINIESSCLACHGPKDNRPNFIK CCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHEECCCCCCCEEECCCCCCCCCEEH AKYLDDLAYDFKAGDLRGLYSVIIPSLETAQTNPE HHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCC >Mature Secondary Structure MKILRFILKNKPFNVQMSSGRKFSHFLTGILISALVIATLVWPIVPVQAAPNPPDFARAV CHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QAIEDLDQMRSELAKTIDPTAEITPQTMQEVCKPVGMKARQLSQDNGWQVKQVAKKYRNP HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCC DHAPQNLQETMAIAKFTQHPELLSYSQIQGDRLHYYRRINIESSCLACHGPKDNRPNFIK CCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHEECCCCCCCEEECCCCCCCCCEEH AKYLDDLAYDFKAGDLRGLYSVIIPSLETAQTNPE HHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA