Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078764

Identifier: 170078764

GI number: 170078764

Start: 2247030

End: 2247518

Strand: Direct

Name: 170078764

Synonym: SYNPCC7002_A2166

Alternate gene names: NA

Gene position: 2247030-2247518 (Clockwise)

Preceding gene: 170078763

Following gene: 170078765

Centisome position: 74.7

GC content: 49.9

Gene sequence:

>489_bases
ATGTTTTTTCTTAAAAAAGGATTGATTCTTCTCAGCCTAAGCCTGATTCTCTTGGTGAGTAGCGGCGTTTGGGCAAGACC
CAGTTTCGCCAGTATCCGCCAACAGGAAGAAGCCCCTGGACAAATCCTGTATCAGTCTCGCCAATCTATCCAAGACAATC
ACGGTCAAACTTGGCAGGTGGTGCTGTTTAAACGGGTTAAAGATGGTCGTGCCGAAACCGTTGACCTACGCCTTGTGGCC
TATCCCGGCCAGGCGACTTTTATCCATCCGGGTTCTTTGAGTTTATCTGCTCCCAATCAAGCGATCCTCACAGCACCAGA
TCAATTTGCCACCGAAGCCCCTGCGCCCAATGTGGGTCAATTTGATTTAAAAGAGATTTTGCCCCAGTTGCCCACCGATC
AAAAAGTTCAACTTAGCTTGCCCCTCAAGGAACAGACGACCATCGAGATTCCCCCGGCAGTTCTCTTGGAGTGGCGACTT
ATGGCCTAG

Upstream 100 bases:

>100_bases
TCAAAGCTGGCGACCTACGGGGACTGTATTCTGTCATTATTCCTAGCCTCGAAACGGCCCAGACTAACCCTGAGTAAACC
CCTCACCCCAGATTCAGCCA

Downstream 100 bases:

>100_bases
GCTGAAATTTTCTTACAGGTAAACAACTCCGGACAAAGGGGAGGTCTGGGGAGACTTCGTAGCGACGATTACTTTTTTAT
CTTGGTTTTGCCTTTTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MFFLKKGLILLSLSLILLVSSGVWARPSFASIRQQEEAPGQILYQSRQSIQDNHGQTWQVVLFKRVKDGRAETVDLRLVA
YPGQATFIHPGSLSLSAPNQAILTAPDQFATEAPAPNVGQFDLKEILPQLPTDQKVQLSLPLKEQTTIEIPPAVLLEWRL
MA

Sequences:

>Translated_162_residues
MFFLKKGLILLSLSLILLVSSGVWARPSFASIRQQEEAPGQILYQSRQSIQDNHGQTWQVVLFKRVKDGRAETVDLRLVA
YPGQATFIHPGSLSLSAPNQAILTAPDQFATEAPAPNVGQFDLKEILPQLPTDQKVQLSLPLKEQTTIEIPPAVLLEWRL
MA
>Mature_162_residues
MFFLKKGLILLSLSLILLVSSGVWARPSFASIRQQEEAPGQILYQSRQSIQDNHGQTWQVVLFKRVKDGRAETVDLRLVA
YPGQATFIHPGSLSLSAPNQAILTAPDQFATEAPAPNVGQFDLKEILPQLPTDQKVQLSLPLKEQTTIEIPPAVLLEWRL
MA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17983; Mature: 17983

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFLKKGLILLSLSLILLVSSGVWARPSFASIRQQEEAPGQILYQSRQSIQDNHGQTWQV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEE
VLFKRVKDGRAETVDLRLVAYPGQATFIHPGSLSLSAPNQAILTAPDQFATEAPAPNVGQ
EEEEHHCCCCCEEEEEEEEEECCCEEEECCCCEEECCCCCEEEECCHHHHCCCCCCCCCC
FDLKEILPQLPTDQKVQLSLPLKEQTTIEIPPAVLLEWRLMA
CCHHHHHHCCCCCCEEEEECCCCCCCEEECCHHHEEEEEECC
>Mature Secondary Structure
MFFLKKGLILLSLSLILLVSSGVWARPSFASIRQQEEAPGQILYQSRQSIQDNHGQTWQV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEE
VLFKRVKDGRAETVDLRLVAYPGQATFIHPGSLSLSAPNQAILTAPDQFATEAPAPNVGQ
EEEEHHCCCCCEEEEEEEEEECCCEEEECCCCEEECCCCCEEEECCHHHHCCCCCCCCCC
FDLKEILPQLPTDQKVQLSLPLKEQTTIEIPPAVLLEWRLMA
CCHHHHHHCCCCCCEEEEECCCCCCCEEECCHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA