Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078747

Identifier: 170078747

GI number: 170078747

Start: 2231296

End: 2232150

Strand: Reverse

Name: 170078747

Synonym: SYNPCC7002_A2149

Alternate gene names: NA

Gene position: 2232150-2231296 (Counterclockwise)

Preceding gene: 170078749

Following gene: 170078745

Centisome position: 74.21

GC content: 50.64

Gene sequence:

>855_bases
ATGCGATCGCTGCCCATTGGGTTATATCTGGAGCAGCCCCAAACCTGGCTCCACCGACTAGACCCTCGGGTAAAACTCGC
TTGGTTGATGAGTTTTTTGATTGGGCCGATTTTGGCGAACAACCTGTGGCGCTTGGGTTTGGTGGGGTTATTAATCGCGA
TCACCCTAACGGCATTAATTCCCCTGCGGGTCTGGAAACAACAGATGGGGTTGCTATTAATTTTTTGTTTGGTGTTGTTT
GGGGTTACGTTAATCACCCCCGATGGCTTGGTGCTTGATCATCAGCCCCGTTTACCGGCAGAGGATCTAGATATTCAGCA
AAACTATGAATATGTGGTGTGGCAGTTTAAATTTATCTCCGTCACGCGCCTCAAACTCGATCTGGGCATTAAGCTCAGTA
CACAAATTTTCACGTTGCTCTACAGCACCAATCTGTATCTGTTGACCACGGCAGCGGAAGAAATTACCACGGGTTTAGAG
TTTCTCCTGGGGCCCCTGCGCCGACTCAAGGTTCCGGTGACAGAAATTTTGCTCACCCTGACCCTCTCACTCCGATTTAT
TCCCCTTGTGTTAGAGGAAATTCAGAATTTAACGCGTTCAGTCCGCACAAGGGCGATCGCCTGGAAGACCCTAGGGTTCA
AACAGAGTGCTCAACTGTGGCTGATGGTCTCCGAAAAACTCCTCGAAAATCTCCTAATGCGGGCTGAACAAATGGCGACG
GCGATGGATATCCGGGGCTTCACCAGTCCAAACCAGCACCTTGTCCGTTGGCATCAACTGCGCTTCCACCGTTGGGATTG
GCTGATCCTTGTGTTGCTGCTGCCCTTTTGGTCATTGCGCTTCCTCTGGGGCTAG

Upstream 100 bases:

>100_bases
CCTAGGATCCAGCATACTCCCTTCTGAGGGCGGGAAATTTTAAGGCTTATTACATAATGGAAGTTGATTTTTTTACGGAA
TTTTCACCACGATGGATTTG

Downstream 100 bases:

>100_bases
TTAGTAACGAATCCGTGGGTCGATCAACGCATTCACAATATCAATCACCAGACTGACCACCACCACAATCGCCCCGAAAA
ACACCATAATCCCCTGTACC

Product: putative cobalt transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRSLPIGLYLEQPQTWLHRLDPRVKLAWLMSFLIGPILANNLWRLGLVGLLIAITLTALIPLRVWKQQMGLLLIFCLVLF
GVTLITPDGLVLDHQPRLPAEDLDIQQNYEYVVWQFKFISVTRLKLDLGIKLSTQIFTLLYSTNLYLLTTAAEEITTGLE
FLLGPLRRLKVPVTEILLTLTLSLRFIPLVLEEIQNLTRSVRTRAIAWKTLGFKQSAQLWLMVSEKLLENLLMRAEQMAT
AMDIRGFTSPNQHLVRWHQLRFHRWDWLILVLLLPFWSLRFLWG

Sequences:

>Translated_284_residues
MRSLPIGLYLEQPQTWLHRLDPRVKLAWLMSFLIGPILANNLWRLGLVGLLIAITLTALIPLRVWKQQMGLLLIFCLVLF
GVTLITPDGLVLDHQPRLPAEDLDIQQNYEYVVWQFKFISVTRLKLDLGIKLSTQIFTLLYSTNLYLLTTAAEEITTGLE
FLLGPLRRLKVPVTEILLTLTLSLRFIPLVLEEIQNLTRSVRTRAIAWKTLGFKQSAQLWLMVSEKLLENLLMRAEQMAT
AMDIRGFTSPNQHLVRWHQLRFHRWDWLILVLLLPFWSLRFLWG
>Mature_284_residues
MRSLPIGLYLEQPQTWLHRLDPRVKLAWLMSFLIGPILANNLWRLGLVGLLIAITLTALIPLRVWKQQMGLLLIFCLVLF
GVTLITPDGLVLDHQPRLPAEDLDIQQNYEYVVWQFKFISVTRLKLDLGIKLSTQIFTLLYSTNLYLLTTAAEEITTGLE
FLLGPLRRLKVPVTEILLTLTLSLRFIPLVLEEIQNLTRSVRTRAIAWKTLGFKQSAQLWLMVSEKLLENLLMRAEQMAT
AMDIRGFTSPNQHLVRWHQLRFHRWDWLILVLLLPFWSLRFLWG

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf92 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 33102; Mature: 33102

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLPIGLYLEQPQTWLHRLDPRVKLAWLMSFLIGPILANNLWRLGLVGLLIAITLTALI
CCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLRVWKQQMGLLLIFCLVLFGVTLITPDGLVLDHQPRLPAEDLDIQQNYEYVVWQFKFIS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEE
VTRLKLDLGIKLSTQIFTLLYSTNLYLLTTAAEEITTGLEFLLGPLRRLKVPVTEILLTL
EEEEEEEECCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TLSLRFIPLVLEEIQNLTRSVRTRAIAWKTLGFKQSAQLWLMVSEKLLENLLMRAEQMAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AMDIRGFTSPNQHLVRWHQLRFHRWDWLILVLLLPFWSLRFLWG
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSLPIGLYLEQPQTWLHRLDPRVKLAWLMSFLIGPILANNLWRLGLVGLLIAITLTALI
CCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLRVWKQQMGLLLIFCLVLFGVTLITPDGLVLDHQPRLPAEDLDIQQNYEYVVWQFKFIS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEE
VTRLKLDLGIKLSTQIFTLLYSTNLYLLTTAAEEITTGLEFLLGPLRRLKVPVTEILLTL
EEEEEEEECCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
TLSLRFIPLVLEEIQNLTRSVRTRAIAWKTLGFKQSAQLWLMVSEKLLENLLMRAEQMAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AMDIRGFTSPNQHLVRWHQLRFHRWDWLILVLLLPFWSLRFLWG
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]