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The map label for this gene is psbM

Identifier: 170078749

GI number: 170078749

Start: 2233236

End: 2233340

Strand: Reverse

Name: psbM

Synonym: SYNPCC7002_A2151

Alternate gene names: 170078749

Gene position: 2233340-2233236 (Counterclockwise)

Preceding gene: 170078750

Following gene: 170078747

Centisome position: 74.25

GC content: 39.05

Gene sequence:

>105_bases
ATGCAAGTTAACGATCTCGGTTTCATTGCAACGATTCTTTTTGTACTCGTACCCACCGTTTTTTTGTTGATCCTTTATAT
CCAGACCAACAAAACGGCTTCCTAA

Upstream 100 bases:

>100_bases
TATTCTTTGGGAATCCCCGTGGCGATCGCCCCTGGTAAGGAGCTAGAGGTGATATTCTTGATATCATTGTGATCTAGCTC
GATGAAGAGGCGATTATTCA

Downstream 100 bases:

>100_bases
GAAAAACCATTTTAAAAAAACACGATAAAAAACAATGGGGGACAGATCCTTGGCGATCGCCCCCTTTTTTATGGCTGTGA
ATCGGTTTTCTTTTTAGCTG

Product: photosystem II reaction centre M protein

Products: NA

Alternate protein names: PSII-M

Number of amino acids: Translated: 34; Mature: 34

Protein sequence:

>34_residues
MQVNDLGFIATILFVLVPTVFLLILYIQTNKTAS

Sequences:

>Translated_34_residues
MQVNDLGFIATILFVLVPTVFLLILYIQTNKTAS
>Mature_34_residues
MQVNDLGFIATILFVLVPTVFLLILYIQTNKTAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbM family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBM_SYNP2 (B1XIN0)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001735387.1
- ProteinModelPortal:   B1XIN0
- SMR:   B1XIN0
- GeneID:   6056760
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A2151
- HOGENOM:   HBG439285
- HAMAP:   MF_00438
- InterPro:   IPR007826
- TIGRFAMs:   TIGR03038

Pfam domain/function: PF05151 PsbM

EC number: NA

Molecular weight: Translated: 3798; Mature: 3798

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1d920868)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVNDLGFIATILFVLVPTVFLLILYIQTNKTAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure
MQVNDLGFIATILFVLVPTVFLLILYIQTNKTAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA