| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is glgP [H]
Identifier: 170078737
GI number: 170078737
Start: 2219908
End: 2222472
Strand: Direct
Name: glgP [H]
Synonym: SYNPCC7002_A2139
Alternate gene names: 170078737
Gene position: 2219908-2222472 (Clockwise)
Preceding gene: 170078736
Following gene: 170078738
Centisome position: 73.8
GC content: 52.63
Gene sequence:
>2565_bases ATGAAACCGACCCACAAGTTTCAGGTCAAAGCCGTTTTACCCCCTGTCCTGGAACCCCTACGCCGCCTCGCCCATAACAT CCACTGGGATTGGAATGTCGCCGCAAAAAGTCTCTTTGTTCGCCTCGATCCAGACCTATGGCAGCAGACGAGCCACAATC CGGTGGCGATGTTGGGTCGCGTTGACCAAGCCCGCCTCGATGAATTAGCCAAGGATGACGGTTTTATCGCCCACATGGAA CGGGCCATTGAACAGCTCGATGACTACCTCCAACAACACACTTGGTACCACAAAGCACGGGGCGAAACCAAAGGGAAAGA ATGCTATGCCTATTTCTGTGCGGAGTATGGCCTCAGCTACTGCCTACCGATCTATTCCGGGGGATTGGGGATTCTTGCGG GGGATCACCTCAAATCCGCCAGTGATCTCGGTTTACCCCTAGTGGCCGTTGGTTTACTGTACCAGGAGGGGTATTTCGCC CAGTATCTCAACCATGACGGCTGGCAACAGGAAGAATATCCGATCAATGATTTCTACAATATGCCCCTCCATTTAGAAAA AGATGACCAGGGAAATGAACTGATCATTGAGGTGGAATTTCCGGGGCGGATGATCTATGCACGGGTTTGGCGTATCGATG TGGGGACGGTGCCCCTCTATATGTTAGATACCAACATTGAGCAAAATACTAACCCCTACGACCACGACATTACCGATGAA CTGTATGGAGGTGATCGCGATCTCCGGCTCCACCAAGAGATCCTCCTGGGTATCGGTGGCGTGCGCATGCTCGAAAAACT AGGCTATAAACCGACGGTCTACCACATGAACGAAGGCCACAGCGCCTTTTTGATCCTGGAGCGCATCCGCAAACTCATGC AAGAGCAGGGCTTAACCTTCCGCCATGCCCAACAGTTTGCCCTCTCGACCCAAATGTTTACGACCCATACCCCCGTGTCC GCTGGGTTTGATCTCTTTTCCCCGGAGCAAACCCTGCATTATGTGGGTCACTATGCCGAAAAATTTGGCCTCTCCCCAGA CCGCTTCCTGGGCCTGGGTCGGGAAAATACTGGGGATCTAGAAGCGCCCTTTAATATGGCGATCTTTGCCCTCAAACACA GTGCTTTTATCAATGGTGTGAGTCAACTCCATGGCCAAGTTTCCCGGGAAATGTTCCATAGCTTGTGGCCTGATTTTCCC CGCGACGAAGTGGGGATTACCTCGATCACGAATGGTGTCCATGCCCGCAGCGTCACCGCCCCCGCCACCCAAGATCTCTA CGACCGCTACCTGGCCCCCACCTGGGATGAAGCCCCCGCCGAAAGCCATATCTGGGAAAAAGTGAGCACCATTCCCAACG AAGAACTGTGGCGTAACCACGAGCGTCAACGCTCCGATTTGGTTGTTTATATCCGACAGCACCTCGCCAAGCAACTACAA AAACAAGGGGCCACTGAAGCGGCGATCGCCAAAGCCCGCCAGGTACTCAAGCCCAACCTCCTGACCATCGGCTTTGCCCG TCGCTTTGCCACCTACAAACGGGCTAATCTCTTTTTGTATGACATTGAACGAATTAAAAAAATTATCCTCGGCAATCCAG AGCGTCAAGTGCAATTTGTCATTGCCGGGAAAGCCCACCCAAAAGATATTCCGGGGAAAGAACTAATCCGCAACATCATC CATACCGTCCAGGAAGAAGGCCTCGAAGATTACGTCGTCTTCTTACCCAACTACAATATTCACATTGCCCGCAAAATGGT GTCTGGGTGCGATGTGTGGCTTAATACCCCCCGACGCCCCCGGGAAGCCTCTGGCACTTCCGGGATGAAAGCGGCGATGA ATGGCTTGCCGAATTTAAGCGTCCTTGATGGCTGGTGGGATGAGGCCGACTATACCCGCACCGGTTGGGCGATCGGCCAC GGGGAAATTTACGATGATCAAGATTACCAAGACCGGGTAGAAGCCAGTGCCCTGTATGAACTGCTAGAAAAAGAAATTGT GCCGCTGTTCTATACGCGCAACAGTTTCGATGTCCCCGAAGGCTGGGTCAATAAAATGAAGGAAGCGATTCGCCTGAATT GCCCCATGTTTAATACGTCGCGGATGCTCCGGGACTATGCCCAAAAGGCTTATTTTAAATTGAGCGATCGCCATTTTGAA CTCAGCGACAATCACTACCAAGCCGTCCAAGAACTCGCCGATTGGAAATCCCAACTATTTAAAGCCTGGTACAACATCCG CGTCGAAGCCTTTGATGTCGGGGAGTCCGCCGAAATCGATATTCAACAGCCCGTCCATGTCAAAGCAATCCTCGATCTCG CGGCCCTGACCCCAGACGATCTGGCCGTGCAAATTTACCTCGGCACCATCAATGACCAGGACGAACTCATTAACGGCGAA AGTTACCCTATGACCTTCCAGGGCCTGACCACCGACCAAAAAGCAATCTACCAAGGCGTTGTGCAATACAAAAAAAGTGG CTACCAAGGCATGGCCCTACGTATTCTCCCCCACCACCCTCACCTAGATGATGCCACCGAGCCCCGGCTCATCCGTTGGG CCTAG
Upstream 100 bases:
>100_bases TCGATTTATAAATTCCCCAGGGGCGATCGCCAGAAAATCAAAGGGAATTCGCTATTTATTAAAGACAGATCATCCCGTTG TCCGTTGAAGGATTTTTCCC
Downstream 100 bases:
>100_bases GACAAACCGTCCAAGAGACGATGCCAATGGCAATTTACCCCTATACTGGGGAAGAACTTTCCCTGAGAGAGTTTACGTTT CTTAAAATTATCGGGCAATC
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 854
Protein sequence:
>854_residues MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGRVDQARLDELAKDDGFIAHME RAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSYCLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFA QYLNHDGWQQEEYPINDFYNMPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTFRHAQQFALSTQMFTTHTPVS AGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDLEAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFP RDEVGITSITNGVHARSVTAPATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFVIAGKAHPKDIPGKELIRNII HTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRPREASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGH GEIYDDQDYQDRVEASALYELLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDDLAVQIYLGTINDQDELINGE SYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHPHLDDATEPRLIRWA
Sequences:
>Translated_854_residues MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGRVDQARLDELAKDDGFIAHME RAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSYCLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFA QYLNHDGWQQEEYPINDFYNMPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTFRHAQQFALSTQMFTTHTPVS AGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDLEAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFP RDEVGITSITNGVHARSVTAPATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFVIAGKAHPKDIPGKELIRNII HTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRPREASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGH GEIYDDQDYQDRVEASALYELLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDDLAVQIYLGTINDQDELINGE SYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHPHLDDATEPRLIRWA >Mature_854_residues MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGRVDQARLDELAKDDGFIAHME RAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSYCLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFA QYLNHDGWQQEEYPINDFYNMPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTFRHAQQFALSTQMFTTHTPVS AGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDLEAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFP RDEVGITSITNGVHARSVTAPATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFVIAGKAHPKDIPGKELIRNII HTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRPREASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGH GEIYDDQDYQDRVEASALYELLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDDLAVQIYLGTINDQDELINGE SYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHPHLDDATEPRLIRWA
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=578, Percent_Identity=22.1453287197232, Blast_Score=72, Evalue=3e-12, Organism=Escherichia coli, GI2367228, Length=424, Percent_Identity=25.9433962264151, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI48994936, Length=578, Percent_Identity=23.5294117647059, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI78706832, Length=580, Percent_Identity=23.6206896551724, Blast_Score=80, Evalue=8e-15, Organism=Drosophila melanogaster, GI24581010, Length=580, Percent_Identity=23.6206896551724, Blast_Score=80, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 98118; Mature: 98118
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGR CCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCEEEEEEECHHHHHCCCCCCCHHHCC VDQARLDELAKDDGFIAHMERAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSY CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHH CLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFAQYLNHDGWQQEEYPINDFYN HHHHHCCCEEEEECCCCCCCHHCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHCC MPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE CCEEEECCCCCCEEEEEEECCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHH LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTF HCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCH RHAQQFALSTQMFTTHTPVSAGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDL HHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCC EAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFPRDEVGITSITNGVHARSVTA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCC PATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ CCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFV HCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCEEEEE IAGKAHPKDIPGKELIRNIIHTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRP EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHCCCHHEECCCCCC REASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGHGEIYDDQDYQDRVEASALYE CCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH LLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE HHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCEEE LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDD CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECCCCCHHHHHHHHHHCCCCC LAVQIYLGTINDQDELINGESYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHP EEEEEEEECCCCHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC HLDDATEPRLIRWA CCCCCCCCCEEECC >Mature Secondary Structure MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGR CCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCEEEEEEECHHHHHCCCCCCCHHHCC VDQARLDELAKDDGFIAHMERAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSY CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHH CLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFAQYLNHDGWQQEEYPINDFYN HHHHHCCCEEEEECCCCCCCHHCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHCC MPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE CCEEEECCCCCCEEEEEEECCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHH LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTF HCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCH RHAQQFALSTQMFTTHTPVSAGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDL HHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCC EAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFPRDEVGITSITNGVHARSVTA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCC PATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ CCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFV HCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCEEEEE IAGKAHPKDIPGKELIRNIIHTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRP EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHCCCHHEECCCCCC REASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGHGEIYDDQDYQDRVEASALYE CCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH LLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE HHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCEEE LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDD CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECCCCCHHHHHHHHHHCCCCC LAVQIYLGTINDQDELINGESYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHP EEEEEEEECCCCHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC HLDDATEPRLIRWA CCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]