Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078715

Identifier: 170078715

GI number: 170078715

Start: 2196195

End: 2198972

Strand: Direct

Name: 170078715

Synonym: SYNPCC7002_A2116

Alternate gene names: NA

Gene position: 2196195-2198972 (Clockwise)

Preceding gene: 170078713

Following gene: 170078717

Centisome position: 73.01

GC content: 48.16

Gene sequence:

>2778_bases
ATGTCTTTTTCTTACATGATTCGCAGATCTAAGGTTATTCTCGTTTGTCTGGTTTTCGGTCTTTTTTTATCCTACGGGCT
GAATTTTATGCCAACTCCACTGGTAAAAGCGCAATCTGCTCCAGAAATGTGTGGGGCGATCGCCATACCTCTGACCCCGG
AAGAGCAAAAATATGCCCAGTCTGCTTGGCAATACTTTGTAGATAATGTACAACCCAGTACTGGATTATCAAATGCTGCT
GGGAGTTTCCCAGCTAGTACGATGTGGGATTTAGGTAATTACTTAATGGCGATGAATGCGGCACGGGGGATAGGACTGAT
CAACCAAGAGGACTTTGATAGTCGATTAAATCAGTTTTTGACGAGCCTCGCCGAACTGCCCCTCTTTGAAAATACCCTGC
CCAATAAAGTCTATAACAGCGCAACTAAAGAGATCGTAGACTATGGCAACAATGCCATTGAACGAGGCATTGGCTGGTCT
GCCCTTGATATAGGCCGTCTCCTTGCTGCTTTTCATATCGTCCAAAGGTGCCATCCTCAATATTCAGACTGGATTTCTGG
CATTGTTTCAAGTTGGAATGTTGCGGAGTCCGTTGAAAATGGCAGCCTCTATGGTGCAATGATTTTACCCGACGGCTCGA
CCCTCAAGGTACAGGAGGGGCGGCTTGGCTATGAGGAATATGCAGCCCGGGGTTATTCTCTCTGGGGATTTGAGGTACCA
GCGGCGATCGCCCACGAACCTTTTGAATTTGTCGATATCTATGGTGTGCAAATTCCGGTTGATACCCGCGATTACTTTGA
GACTAATGCTAATAACTACGTCGTCAGCGAAGCCTACATTTTAGATGCCATCGAATTTGGCTTACAGGGAGAACGGGCAG
ACCATGCTCGTCGGGTATTTGAAGCACAAAAACGGCGTTATGAAGAGACAGGACTGTTGACCTCTGTTTCAGAAGATAAT
ATTAATCAGGCCCCCCACTTTCTCTACAACACGGTTTATGCCAATGGTCAGCCCTGGGCTGTGATCACAGAAAACAACGA
AGCATATCCAGAACTACGCACTCTCAGTTCAAAATCAGCATTCGGTTGGCGCTACATTTATCCTGACGATGCCTATGCCC
AGAAAGTTTTTGACCATATCAAAGACAGTACAAATTCCGGTAGAGGTTACTATGCGGGGATTTATGAGTCGGGCCTCTAT
GATCCGCAGCCGCCCCTCAACGATATTTTGACGGGGAATACCAATGGGTTGATCCTTGAAATTCTCTATTACAAAGCCAG
GGGTTTTAAACCGATGGTTGAGGGGCAAAGCTCAATCGCTAGCTCCCCTGTTCCAAGGGTTTCAGTTGCTCCCATTGCGT
CACTTACCAATAGTGCTACGGTTAGTTGTGCGCCCCAAGCTGAAGAAATTGATGTGGCGGCGATCGCCCCCGTGCGCCCA
GTAAAATCCAGTAATTGTCCTGCCCCAGGCGAGGAAATAAATCCGGCTGATCGTCGTTACGCAGAAATCGCCTGGCAATA
TTTTGAAACCAACCATCGAAAAACGGGTCTGGTGCCAGATCGAAGCGATCTAGAAGGCATAACCGCGTGGGGAATGGGAG
ATTATTTGGCTGCACTCCATGCGGCCCGTACCCTTAATATAATTTCCCCAGAAACCTTTGATCAGCGCGTGCGCCACTTT
CTCGGTGCCTTGCAAGAAATGGAGCTATTTGGGGCGGAGTTGCCCTACCGCGCCTATGATACTTTGACCCTGAAACCCAT
CGACTATGGTGGTAACCACAGCAACAATGGTTGGTCTGGCTTAGATCTGGGTCGGCTTTTGACCTCTCTCCATGTTTTAA
AAACTTGCCACCCAGAATATCAAGAGGCAGTCGATCAGGTAGTTTTAGATTGGTCGTATCTACGGGTTGTGCGCGATGGC
CAAGTTGCGAATATCAGTGTGGAGAAAAATAACCGGGGCAGACAACAGCGTCTCCAAGTTCAGCCAGCTCATCTGCTTGG
TTATGAAGAATATGCTGCGCGGGGATTTCAGCTTTGGGGTTTTGATGTCCATCGTTCTGCCATTGGGGATGATTATGTAA
CCCAAACGGTTGCTGGGGAAGCAATCCCCATCGCCCACTCCCAATCAGACCACCGTCAGCAACAGAAGAGAGCCAGCACT
ATCACGAATCCCTTTCTGCTTTATGGTTTGGAATTTGGTTTTGACCCCCAAAGTCGTAATTTTATTGACAGTATCTATCG
AGCAGAGGCAAAACGCTATGGAGAGACGGGGGAGTTGAGCGCATCGGGAACCACACTGATTCAGGAACCCCCCTATGTGA
TCCACAGTACGGTCATTAATAATGGGAAGCCTTGGGCCGCAGTGGATGACGGGGGAAACCTGGTACCACAAGGCCGTGTT
GTCAGTACGGCGATCGCCTCTGCTTACCATGCGTTATTTCCAGATGATGACTATGGGAAAACCCTATGGCAAGCCACATT
AGACCTATACGATCCAAACCTAGGCTATTACGAAGGTTTGTACGAAGAGAGCGGACAGCCTAGCCTCGGACTGACCAGCG
GTACAAATAGCTTGATCCTGCAGGCTTTGCTCTATAAATACATGGCTCAACAGCCGATTATTCGGCCCCATCAAAATCTA
GAAAGTCGCTGGTGGCAGGAAATCAAAAATGGCGATCGCCATGGCTTAGGACTCCCTAGTCGGAGCTTTCCTCGCATCGA
ACTTAAAGGGACTGGAAATCGCCAATATTGGGATCTCAAAACCAATGTAAATAATTAA

Upstream 100 bases:

>100_bases
TGGTTATTCCCTGGAGTGATTACTCTTCGTCTTCATTTTTCAGCCAGCCTCAATCTAAGTGCGACTGATATTGCTTTTCT
ATTATTTGAATTAAGAGCGC

Downstream 100 bases:

>100_bases
CTACAAACGTCTCACGTTTATTTCTATTTATTAAGTAGAATTTTTTTTTCGTATCTCGAAATCTCAGAAATCATTAGTTA
AAAAATCAAAGCTGTACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 925; Mature: 924

Protein sequence:

>925_residues
MSFSYMIRRSKVILVCLVFGLFLSYGLNFMPTPLVKAQSAPEMCGAIAIPLTPEEQKYAQSAWQYFVDNVQPSTGLSNAA
GSFPASTMWDLGNYLMAMNAARGIGLINQEDFDSRLNQFLTSLAELPLFENTLPNKVYNSATKEIVDYGNNAIERGIGWS
ALDIGRLLAAFHIVQRCHPQYSDWISGIVSSWNVAESVENGSLYGAMILPDGSTLKVQEGRLGYEEYAARGYSLWGFEVP
AAIAHEPFEFVDIYGVQIPVDTRDYFETNANNYVVSEAYILDAIEFGLQGERADHARRVFEAQKRRYEETGLLTSVSEDN
INQAPHFLYNTVYANGQPWAVITENNEAYPELRTLSSKSAFGWRYIYPDDAYAQKVFDHIKDSTNSGRGYYAGIYESGLY
DPQPPLNDILTGNTNGLILEILYYKARGFKPMVEGQSSIASSPVPRVSVAPIASLTNSATVSCAPQAEEIDVAAIAPVRP
VKSSNCPAPGEEINPADRRYAEIAWQYFETNHRKTGLVPDRSDLEGITAWGMGDYLAALHAARTLNIISPETFDQRVRHF
LGALQEMELFGAELPYRAYDTLTLKPIDYGGNHSNNGWSGLDLGRLLTSLHVLKTCHPEYQEAVDQVVLDWSYLRVVRDG
QVANISVEKNNRGRQQRLQVQPAHLLGYEEYAARGFQLWGFDVHRSAIGDDYVTQTVAGEAIPIAHSQSDHRQQQKRAST
ITNPFLLYGLEFGFDPQSRNFIDSIYRAEAKRYGETGELSASGTTLIQEPPYVIHSTVINNGKPWAAVDDGGNLVPQGRV
VSTAIASAYHALFPDDDYGKTLWQATLDLYDPNLGYYEGLYEESGQPSLGLTSGTNSLILQALLYKYMAQQPIIRPHQNL
ESRWWQEIKNGDRHGLGLPSRSFPRIELKGTGNRQYWDLKTNVNN

Sequences:

>Translated_925_residues
MSFSYMIRRSKVILVCLVFGLFLSYGLNFMPTPLVKAQSAPEMCGAIAIPLTPEEQKYAQSAWQYFVDNVQPSTGLSNAA
GSFPASTMWDLGNYLMAMNAARGIGLINQEDFDSRLNQFLTSLAELPLFENTLPNKVYNSATKEIVDYGNNAIERGIGWS
ALDIGRLLAAFHIVQRCHPQYSDWISGIVSSWNVAESVENGSLYGAMILPDGSTLKVQEGRLGYEEYAARGYSLWGFEVP
AAIAHEPFEFVDIYGVQIPVDTRDYFETNANNYVVSEAYILDAIEFGLQGERADHARRVFEAQKRRYEETGLLTSVSEDN
INQAPHFLYNTVYANGQPWAVITENNEAYPELRTLSSKSAFGWRYIYPDDAYAQKVFDHIKDSTNSGRGYYAGIYESGLY
DPQPPLNDILTGNTNGLILEILYYKARGFKPMVEGQSSIASSPVPRVSVAPIASLTNSATVSCAPQAEEIDVAAIAPVRP
VKSSNCPAPGEEINPADRRYAEIAWQYFETNHRKTGLVPDRSDLEGITAWGMGDYLAALHAARTLNIISPETFDQRVRHF
LGALQEMELFGAELPYRAYDTLTLKPIDYGGNHSNNGWSGLDLGRLLTSLHVLKTCHPEYQEAVDQVVLDWSYLRVVRDG
QVANISVEKNNRGRQQRLQVQPAHLLGYEEYAARGFQLWGFDVHRSAIGDDYVTQTVAGEAIPIAHSQSDHRQQQKRAST
ITNPFLLYGLEFGFDPQSRNFIDSIYRAEAKRYGETGELSASGTTLIQEPPYVIHSTVINNGKPWAAVDDGGNLVPQGRV
VSTAIASAYHALFPDDDYGKTLWQATLDLYDPNLGYYEGLYEESGQPSLGLTSGTNSLILQALLYKYMAQQPIIRPHQNL
ESRWWQEIKNGDRHGLGLPSRSFPRIELKGTGNRQYWDLKTNVNN
>Mature_924_residues
SFSYMIRRSKVILVCLVFGLFLSYGLNFMPTPLVKAQSAPEMCGAIAIPLTPEEQKYAQSAWQYFVDNVQPSTGLSNAAG
SFPASTMWDLGNYLMAMNAARGIGLINQEDFDSRLNQFLTSLAELPLFENTLPNKVYNSATKEIVDYGNNAIERGIGWSA
LDIGRLLAAFHIVQRCHPQYSDWISGIVSSWNVAESVENGSLYGAMILPDGSTLKVQEGRLGYEEYAARGYSLWGFEVPA
AIAHEPFEFVDIYGVQIPVDTRDYFETNANNYVVSEAYILDAIEFGLQGERADHARRVFEAQKRRYEETGLLTSVSEDNI
NQAPHFLYNTVYANGQPWAVITENNEAYPELRTLSSKSAFGWRYIYPDDAYAQKVFDHIKDSTNSGRGYYAGIYESGLYD
PQPPLNDILTGNTNGLILEILYYKARGFKPMVEGQSSIASSPVPRVSVAPIASLTNSATVSCAPQAEEIDVAAIAPVRPV
KSSNCPAPGEEINPADRRYAEIAWQYFETNHRKTGLVPDRSDLEGITAWGMGDYLAALHAARTLNIISPETFDQRVRHFL
GALQEMELFGAELPYRAYDTLTLKPIDYGGNHSNNGWSGLDLGRLLTSLHVLKTCHPEYQEAVDQVVLDWSYLRVVRDGQ
VANISVEKNNRGRQQRLQVQPAHLLGYEEYAARGFQLWGFDVHRSAIGDDYVTQTVAGEAIPIAHSQSDHRQQQKRASTI
TNPFLLYGLEFGFDPQSRNFIDSIYRAEAKRYGETGELSASGTTLIQEPPYVIHSTVINNGKPWAAVDDGGNLVPQGRVV
STAIASAYHALFPDDDYGKTLWQATLDLYDPNLGYYEGLYEESGQPSLGLTSGTNSLILQALLYKYMAQQPIIRPHQNLE
SRWWQEIKNGDRHGLGLPSRSFPRIELKGTGNRQYWDLKTNVNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103217; Mature: 103085

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSYMIRRSKVILVCLVFGLFLSYGLNFMPTPLVKAQSAPEMCGAIAIPLTPEEQKYAQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCEEEECCCCCHHHHHH
SAWQYFVDNVQPSTGLSNAAGSFPASTMWDLGNYLMAMNAARGIGLINQEDFDSRLNQFL
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
TSLAELPLFENTLPNKVYNSATKEIVDYGNNAIERGIGWSALDIGRLLAAFHIVQRCHPQ
HHHHHCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
YSDWISGIVSSWNVAESVENGSLYGAMILPDGSTLKVQEGRLGYEEYAARGYSLWGFEVP
HHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHCCCEEECCCCC
AAIAHEPFEFVDIYGVQIPVDTRDYFETNANNYVVSEAYILDAIEFGLQGERADHARRVF
HHHHCCCCCEEEEEEEEEECCCHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHH
EAQKRRYEETGLLTSVSEDNINQAPHFLYNTVYANGQPWAVITENNEAYPELRTLSSKSA
HHHHHHHHHHCCEEECCCCCCCCCCHHHHHEEEECCCCEEEEECCCCCCCHHHHHCCCCC
FGWRYIYPDDAYAQKVFDHIKDSTNSGRGYYAGIYESGLYDPQPPLNDILTGNTNGLILE
CCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCHHHHHCCCCCCEEEE
ILYYKARGFKPMVEGQSSIASSPVPRVSVAPIASLTNSATVSCAPQAEEIDVAAIAPVRP
EEEHHHCCCCHHHCCCHHHCCCCCCCEEHHHHHHHCCCCEEEECCCCCCCCEEEECCCCC
VKSSNCPAPGEEINPADRRYAEIAWQYFETNHRKTGLVPDRSDLEGITAWGMGDYLAALH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHH
AARTLNIISPETFDQRVRHFLGALQEMELFGAELPYRAYDTLTLKPIDYGGNHSNNGWSG
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
LDLGRLLTSLHVLKTCHPEYQEAVDQVVLDWSYLRVVRDGQVANISVEKNNRGRQQRLQV
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCHHHHCC
QPAHLLGYEEYAARGFQLWGFDVHRSAIGDDYVTQTVAGEAIPIAHSQSDHRQQQKRAST
CHHHHHCCHHHHHCCEEEECCHHHHHHCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHH
ITNPFLLYGLEFGFDPQSRNFIDSIYRAEAKRYGETGELSASGTTLIQEPPYVIHSTVIN
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEC
NGKPWAAVDDGGNLVPQGRVVSTAIASAYHALFPDDDYGKTLWQATLDLYDPNLGYYEGL
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
YEESGQPSLGLTSGTNSLILQALLYKYMAQQPIIRPHQNLESRWWQEIKNGDRHGLGLPS
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
RSFPRIELKGTGNRQYWDLKTNVNN
CCCCEEEEEECCCCEEEEECCCCCC
>Mature Secondary Structure 
SFSYMIRRSKVILVCLVFGLFLSYGLNFMPTPLVKAQSAPEMCGAIAIPLTPEEQKYAQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCEEEECCCCCHHHHHH
SAWQYFVDNVQPSTGLSNAAGSFPASTMWDLGNYLMAMNAARGIGLINQEDFDSRLNQFL
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
TSLAELPLFENTLPNKVYNSATKEIVDYGNNAIERGIGWSALDIGRLLAAFHIVQRCHPQ
HHHHHCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
YSDWISGIVSSWNVAESVENGSLYGAMILPDGSTLKVQEGRLGYEEYAARGYSLWGFEVP
HHHHHHHHHHCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHCCCEEECCCCC
AAIAHEPFEFVDIYGVQIPVDTRDYFETNANNYVVSEAYILDAIEFGLQGERADHARRVF
HHHHCCCCCEEEEEEEEEECCCHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHH
EAQKRRYEETGLLTSVSEDNINQAPHFLYNTVYANGQPWAVITENNEAYPELRTLSSKSA
HHHHHHHHHHCCEEECCCCCCCCCCHHHHHEEEECCCCEEEEECCCCCCCHHHHHCCCCC
FGWRYIYPDDAYAQKVFDHIKDSTNSGRGYYAGIYESGLYDPQPPLNDILTGNTNGLILE
CCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCHHHHHCCCCCCEEEE
ILYYKARGFKPMVEGQSSIASSPVPRVSVAPIASLTNSATVSCAPQAEEIDVAAIAPVRP
EEEHHHCCCCHHHCCCHHHCCCCCCCEEHHHHHHHCCCCEEEECCCCCCCCEEEECCCCC
VKSSNCPAPGEEINPADRRYAEIAWQYFETNHRKTGLVPDRSDLEGITAWGMGDYLAALH
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHH
AARTLNIISPETFDQRVRHFLGALQEMELFGAELPYRAYDTLTLKPIDYGGNHSNNGWSG
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCC
LDLGRLLTSLHVLKTCHPEYQEAVDQVVLDWSYLRVVRDGQVANISVEKNNRGRQQRLQV
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCHHHHCC
QPAHLLGYEEYAARGFQLWGFDVHRSAIGDDYVTQTVAGEAIPIAHSQSDHRQQQKRAST
CHHHHHCCHHHHHCCEEEECCHHHHHHCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHH
ITNPFLLYGLEFGFDPQSRNFIDSIYRAEAKRYGETGELSASGTTLIQEPPYVIHSTVIN
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEC
NGKPWAAVDDGGNLVPQGRVVSTAIASAYHALFPDDDYGKTLWQATLDLYDPNLGYYEGL
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
YEESGQPSLGLTSGTNSLILQALLYKYMAQQPIIRPHQNLESRWWQEIKNGDRHGLGLPS
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
RSFPRIELKGTGNRQYWDLKTNVNN
CCCCEEEEEECCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA