Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is yebA [H]

Identifier: 170078713

GI number: 170078713

Start: 2190845

End: 2193238

Strand: Direct

Name: yebA [H]

Synonym: SYNPCC7002_A2113

Alternate gene names: 170078713

Gene position: 2190845-2193238 (Clockwise)

Preceding gene: 170078709

Following gene: 170078715

Centisome position: 72.83

GC content: 51.67

Gene sequence:

>2394_bases
ATGACATCACCCTCTTCCCAACGCCTCAAACCGAAATCCTTTGCGGATTTAGTGGCCCAATTGCGTAATTTTCCCAAACC
CCAAAGCGAAGATTCCGTACTGCTGCGGGCCTTGGTACAGCTATTGGTGGTTGTCGGCATTATTGCGACGGATGTGGCTT
CAGAAGGAAACATGATCTGGTTTGGCTGGCCGATCAGTGTTCTAGCGGTGCCCTTAACGCTCCTGGGGGGAGTCTGGAGT
TGGCAAAACCGTCAGAAGGCGAATGTGGGGGCAAAATTTTTTATTGCCATCGGCATGTTGGGCATGCTGTTGCTCTTTTT
CCGGAATCTGTATGCCAATTTAAACGATACGCGCTTGGTGCTGGCAGAGCTCCTCATTCAACTGCAAATTCTCCATAGCT
TCGATTTGCCCCGCCGAAAGGATCTGGGTTATTCGATGGTGATCGGCCTTATTTTGTTGGGGGTGGCGGGCACTGTTTCT
CAAACGCTAACCTTTGCGCCCTGGTTAATTCTATTTTTGGCGATCGCCCTCCCTGTTCTAGTTTTAGATTACCGTTCGCG
CCTTGGCCTAGCTGGCTTGGAGACGCTCCTTTGGCCGCAGCGCTCCAGTGCCCGTAAAGGCCGCGCTGACCTCCTGAAAA
ATTCTCCCCTGTCGCCCAAACGCCTGGGCGCAATTTTGGGGATTACCTTGGTATTGGGCTTGGGACTCTTTAGCATCATG
CCCCGTTTTCCTGGCTATCAACTCAGCACCTTGCCTGTGAGTTTGCCCGCCGATGCCCCTGAAAATGAACGTTTTAGCCC
GACTAACCTTAGCCTCGTCAATCCCGGTTACGAGAATCCTGGCGGCGAAGGAAATGAAAACGCCGATGGTGCGACCTTTG
GGAATAGTCCGGGTACTGGGGCAGGCACGGGTGAAGGTAGTAGTCCCAGCGAAGGTCAAGGGGAACTCGATAAAACTCAG
TATTACGGTTTCAATAGCAAAATCAACCAAAATCTCCGGGGTGAGATGGAAAAGGTGCTGGTGATGCGGGTGCGATCGCA
GGCCCCTGGTTTTTGGCGCGTGATGTCCTTTGACCGTTACACAGGCCAGGGCTGGGAAGTCACCAATGCCGATGATTTGC
AACTCACGGAGCGTTCCCGTTGGGCAGGACGTTTTTTCCTAACGCCTTTTATCCCCAACCCAGTGGAAAAGAAAAAAATT
ATCCAGAGCTATACCGCCGTTTTGTCTTTGCCGAACATTGTCCCGGCGATGCAGTATCCGACGGAGCTTTATTTTCCCAC
GGCGGAGATTGGCCAAGATCCAGAGGGAAATTTGCGATCGCCTTTGGGACTTTTAGAAGGTCTAACCTATACCGTTGTTT
CTAAAGTACCCTACCGTAACCGGACGGAATTGGCGGCAGCAGGGACAGATTATCCGCCCTTTGTCACCGAGAAATATCTA
GATGTCCCCCCAGAGATAAAAGCGGAGGTAAGGGCCGTTGCCGAGGAAATTCTCTCCCAGGCCAATAGCCCCATCACTTC
CCCCTACGAAAAGGCTCTCTATCTCGCCCAAGGGTTGAAGCAACGCTTCCCCCAAGCCCAAGAAATTCCGTTCTTCGCAG
ACGATGAAGATCTTGTTGAGGCCTTCCTGTTCAAATACAAGGGGGGCTACGCCGATCATTACGCCACAGTCCTCACAATT
ATGTTGCGCTCTATTGGGATTCCGGCTCGGTTTGCAACGGGATTTGACCAGGGAGATTTTAATCCATTTACGGGCTATTA
CCTCGTCCACAATACCGATGCCCACGCTGTCACAGAAGCCTATTTTCCTGGTCAGGGTTGGTTTGCGTTCAATCCACTGC
CGGGTTATGAAGTTGTGCCGCCTTCCTTTGAGGATAGCGGCGCTTTTGGCGTATTGAGATCATTTTGGCGTTGGGTTGCG
GGTTGGGTGCCGTCGCCGATTCTTGGCTTCTTTGAGGGGCTTTGGTTTACGACCTTGAAAATACTGGGATATGTAATTTC
GCGGCTGTGGGGCTTTGTTTCCAGTGGCCTCGTTGGGGCCATTACGGGGGCGATCGCCGTTGCTGTCGCCAGCATGGGTG
GTTGGTTTGTCATTAAACAAATTCGCAACTGGTTCCAACGGCGTCGCTTTGCTCGATTACCGATGATGGAACAGCTCTAC
CAACAAATGCTCCTGCTGCTCCAAAACAAAGGGCACCAAAAACAACGTACCCAAACTCCTTGGGAGTTTTTGCGGACGAT
TCAACCACAATATCGTCCTGAAACCTTAGAAATTTTGACGGAACTGACCGAAGCCTATGTCAACTGGCGCTACGGTGAAC
AGCCTGCCAATACGGACTACCTCCGGCAGCAACTCAAACGCTTACGACGTTCCTTTTATCGAGGTCAATCTTAA

Upstream 100 bases:

>100_bases
GTAGGCTGCTGTTCCGTTTTATAGCGTCAGTGGGATTTGTGCTGAATTTGAAGGATAAGGGTAGTCTAGTAGAAGGTTTT
TGATTTCCGCCTACAGCACG

Downstream 100 bases:

>100_bases
AACGGAGAGGGGGGGATTCGAACCCCCGACTGAGTTGCCCCAGTAACGGTTTTCGAGACCGCCGCATTCAACCACTCTGC
CACCTCTCCAGGGACCTAAA

Product: transglutaminase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 797; Mature: 796

Protein sequence:

>797_residues
MTSPSSQRLKPKSFADLVAQLRNFPKPQSEDSVLLRALVQLLVVVGIIATDVASEGNMIWFGWPISVLAVPLTLLGGVWS
WQNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLVLAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVS
QTLTFAPWLILFLAIALPVLVLDYRSRLGLAGLETLLWPQRSSARKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIM
PRFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGNENADGATFGNSPGTGAGTGEGSSPSEGQGELDKTQ
YYGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRYTGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNPVEKKKI
IQSYTAVLSLPNIVPAMQYPTELYFPTAEIGQDPEGNLRSPLGLLEGLTYTVVSKVPYRNRTELAAAGTDYPPFVTEKYL
DVPPEIKAEVRAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFADDEDLVEAFLFKYKGGYADHYATVLTI
MLRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEAYFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVA
GWVPSPILGFFEGLWFTTLKILGYVISRLWGFVSSGLVGAITGAIAVAVASMGGWFVIKQIRNWFQRRRFARLPMMEQLY
QQMLLLLQNKGHQKQRTQTPWEFLRTIQPQYRPETLEILTELTEAYVNWRYGEQPANTDYLRQQLKRLRRSFYRGQS

Sequences:

>Translated_797_residues
MTSPSSQRLKPKSFADLVAQLRNFPKPQSEDSVLLRALVQLLVVVGIIATDVASEGNMIWFGWPISVLAVPLTLLGGVWS
WQNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLVLAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVS
QTLTFAPWLILFLAIALPVLVLDYRSRLGLAGLETLLWPQRSSARKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIM
PRFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGNENADGATFGNSPGTGAGTGEGSSPSEGQGELDKTQ
YYGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRYTGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNPVEKKKI
IQSYTAVLSLPNIVPAMQYPTELYFPTAEIGQDPEGNLRSPLGLLEGLTYTVVSKVPYRNRTELAAAGTDYPPFVTEKYL
DVPPEIKAEVRAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFADDEDLVEAFLFKYKGGYADHYATVLTI
MLRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEAYFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVA
GWVPSPILGFFEGLWFTTLKILGYVISRLWGFVSSGLVGAITGAIAVAVASMGGWFVIKQIRNWFQRRRFARLPMMEQLY
QQMLLLLQNKGHQKQRTQTPWEFLRTIQPQYRPETLEILTELTEAYVNWRYGEQPANTDYLRQQLKRLRRSFYRGQS
>Mature_796_residues
TSPSSQRLKPKSFADLVAQLRNFPKPQSEDSVLLRALVQLLVVVGIIATDVASEGNMIWFGWPISVLAVPLTLLGGVWSW
QNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLVLAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVSQ
TLTFAPWLILFLAIALPVLVLDYRSRLGLAGLETLLWPQRSSARKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIMP
RFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGNENADGATFGNSPGTGAGTGEGSSPSEGQGELDKTQY
YGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRYTGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNPVEKKKII
QSYTAVLSLPNIVPAMQYPTELYFPTAEIGQDPEGNLRSPLGLLEGLTYTVVSKVPYRNRTELAAAGTDYPPFVTEKYLD
VPPEIKAEVRAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFADDEDLVEAFLFKYKGGYADHYATVLTIM
LRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEAYFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVAG
WVPSPILGFFEGLWFTTLKILGYVISRLWGFVSSGLVGAITGAIAVAVASMGGWFVIKQIRNWFQRRRFARLPMMEQLYQ
QMLLLLQNKGHQKQRTQTPWEFLRTIQPQYRPETLEILTELTEAYVNWRYGEQPANTDYLRQQLKRLRRSFYRGQS

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002931 [H]

Pfam domain/function: PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 89174; Mature: 89043

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSPSSQRLKPKSFADLVAQLRNFPKPQSEDSVLLRALVQLLVVVGIIATDVASEGNMIW
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
FGWPISVLAVPLTLLGGVWSWQNRQKANVGAKFFIAIGMLGMLLLFFRNLYANLNDTRLV
ECCCHHHHHHHHHHHCCHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LAELLIQLQILHSFDLPRRKDLGYSMVIGLILLGVAGTVSQTLTFAPWLILFLAIALPVL
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLDYRSRLGLAGLETLLWPQRSSARKGRADLLKNSPLSPKRLGAILGITLVLGLGLFSIM
HHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
PRFPGYQLSTLPVSLPADAPENERFSPTNLSLVNPGYENPGGEGNENADGATFGNSPGTG
CCCCCCEEEECEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
AGTGEGSSPSEGQGELDKTQYYGFNSKINQNLRGEMEKVLVMRVRSQAPGFWRVMSFDRY
CCCCCCCCCCCCCCCCCHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
TGQGWEVTNADDLQLTERSRWAGRFFLTPFIPNPVEKKKIIQSYTAVLSLPNIVPAMQYP
CCCCCEECCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCC
TELYFPTAEIGQDPEGNLRSPLGLLEGLTYTVVSKVPYRNRTELAAAGTDYPPFVTEKYL
CCEECCCHHHCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCHHEECCCCCCCCHHHHHC
DVPPEIKAEVRAVAEEILSQANSPITSPYEKALYLAQGLKQRFPQAQEIPFFADDEDLVE
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
AFLFKYKGGYADHYATVLTIMLRSIGIPARFATGFDQGDFNPFTGYYLVHNTDAHAVTEA
HHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHH
YFPGQGWFAFNPLPGYEVVPPSFEDSGAFGVLRSFWRWVAGWVPSPILGFFEGLWFTTLK
CCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ILGYVISRLWGFVSSGLVGAITGAIAVAVASMGGWFVIKQIRNWFQRRRFARLPMMEQLY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
QQMLLLLQNKGHQKQRTQTPWEFLRTIQPQYRPETLEILTELTEAYVNWRYGEQPANTDY
HHHHHHHHCCCCHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
LRQQLKRLRRSFYRGQS
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]